RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 OR9G4Q8NGQ1 327 aa7.79□□□□□ -1.16
PDLIM5-217ENST00000512274 KRTAP4-5Q9BYR2 181 aa7.79□□□□□ -1.16
PDLIM5-217ENST00000512274 GFRA4Q9GZZ7 299 aa7.79□□□□□ -1.16
PDLIM5-217ENST00000512274 SAV1Q9H4B6 383 aaPredicted RBP7.79□□□□□ -1.16
PDLIM5-217ENST00000512274 IL36BQ9NZH7 164 aa7.79□□□□□ -1.16
PDLIM5-217ENST00000512274 TRAV34A0A0B4J273 112 aa7.78□□□□□ -1.16
PDLIM5-217ENST00000512274 SMIM27A0A1W2PRY6 76 aa7.78□□□□□ -1.16
PDLIM5-217ENST00000512274 ZNF207O43670 478 aaKnown RBP7.78□□□□□ -1.16
PDLIM5-217ENST00000512274 RAB5AP20339 215 aa7.78□□□□□ -1.16
PDLIM5-217ENST00000512274 ID1P41134 155 aa7.78□□□□□ -1.16
PDLIM5-217ENST00000512274 FOXA3P55318 350 aaPredicted RBP7.78□□□□□ -1.16
PDLIM5-217ENST00000512274 ERVFC1-1P60608 527 aa7.78□□□□□ -1.16
PDLIM5-217ENST00000512274 RPL19P84098 196 aaKnown RBP7.78□□□□□ -1.16
PDLIM5-217ENST00000512274 COX19Q49B96 90 aa7.78□□□□□ -1.16
PDLIM5-217ENST00000512274 TCF24Q7RTU0 167 aa7.78□□□□□ -1.16
PDLIM5-217ENST00000512274 LINC00477Q96M19 166 aa7.78□□□□□ -1.16
PDLIM5-217ENST00000512274 ODF3Q96PU9 254 aa7.78□□□□□ -1.16
PDLIM5-217ENST00000512274 SELENOKQ9Y6D0 94 aa7.78□□□□□ -1.16
PDLIM5-217ENST00000512274 MUC4Q99102 2169 aa7.78□□□□□ -1.16
PDLIM5-217ENST00000512274 K7EQG2 157 aa7.77□□□□□ -1.17
PDLIM5-217ENST00000512274 SNRPCP09234 159 aaKnown RBP7.77□□□□□ -1.17
PDLIM5-217ENST00000512274 RASL11AQ6T310 242 aa7.77□□□□□ -1.17
PDLIM5-217ENST00000512274 APRG1Q8IVJ8 170 aa7.77□□□□□ -1.17
PDLIM5-217ENST00000512274 FAM24BQ8N5W8 94 aa7.77□□□□□ -1.17
PDLIM5-217ENST00000512274 C16orf92Q96LL3 132 aa7.77□□□□□ -1.17
PDLIM5-217ENST00000512274 SRD5A3Q9H8P0 318 aa7.77□□□□□ -1.17
PDLIM5-217ENST00000512274 ALMS1Q8TCU4 4167 aa7.77□□□□□ -1.17
PDLIM5-217ENST00000512274 IGHV3OR16-13A0A075B7E8 117 aa7.76□□□□□ -1.17
PDLIM5-217ENST00000512274 IGHV3-49A0A0A0MS15 119 aa7.76□□□□□ -1.17
PDLIM5-217ENST00000512274 TRAV8-1A0A0A6YYK1 113 aa7.76□□□□□ -1.17
PDLIM5-217ENST00000512274 IGHV3-74A0A0B4J1X5 117 aa7.76□□□□□ -1.17
PDLIM5-217ENST00000512274 IGHV3-66A0A0C4DH42 116 aa7.76□□□□□ -1.17
PDLIM5-217ENST00000512274 CSN3P07498 182 aa7.76□□□□□ -1.17
PDLIM5-217ENST00000512274 CXCL1P09341 107 aa7.76□□□□□ -1.17
PDLIM5-217ENST00000512274 EDN2P20800 178 aa7.76□□□□□ -1.17
PDLIM5-217ENST00000512274 FAM3BP58499 235 aaPredicted RBP7.76□□□□□ -1.17
PDLIM5-217ENST00000512274 OR5I1Q13606 314 aa7.76□□□□□ -1.17
PDLIM5-217ENST00000512274 Q6AWC8 147 aa7.76□□□□□ -1.17
PDLIM5-217ENST00000512274 NUDT10Q8NFP7 164 aa7.76□□□□□ -1.17
PDLIM5-217ENST00000512274 OR2K2Q8NGT1 345 aa7.76□□□□□ -1.17
PDLIM5-217ENST00000512274 TSKUQ8WUA8 353 aa7.76□□□□□ -1.17
PDLIM5-217ENST00000512274 DLX4Q92988 240 aaPredicted RBP7.76□□□□□ -1.17
PDLIM5-217ENST00000512274 NUDT11Q96G61 164 aa7.76□□□□□ -1.17
PDLIM5-217ENST00000512274 FAM210BQ96KR6 192 aa7.76□□□□□ -1.17
PDLIM5-217ENST00000512274 FAM19A4Q96LR4 140 aa7.76□□□□□ -1.17
PDLIM5-217ENST00000512274 NDFIP1Q9BT67 221 aa7.76□□□□□ -1.17
PDLIM5-217ENST00000512274 KIAA1109Q2LD37 5005 aa7.75□□□□□ -1.17
PDLIM5-217ENST00000512274 A8MTW9 85 aa7.75□□□□□ -1.17
PDLIM5-217ENST00000512274 A8MWL6 223 aa7.75□□□□□ -1.17
PDLIM5-217ENST00000512274 A8MZ25 164 aa7.75□□□□□ -1.17
PDLIM5-217ENST00000512274 GATCO43716 136 aaKnown RBP7.75□□□□□ -1.17
PDLIM5-217ENST00000512274 CT45A10P0DMU9 189 aa7.75□□□□□ -1.17
PDLIM5-217ENST00000512274 MGST1P10620 155 aaKnown RBP7.75□□□□□ -1.17
PDLIM5-217ENST00000512274 CRISP2P16562 243 aa7.75□□□□□ -1.17
PDLIM5-217ENST00000512274 ZNF138P52744 262 aa7.75□□□□□ -1.17
PDLIM5-217ENST00000512274 SNRPD3P62318 126 aaKnown RBP7.75□□□□□ -1.17
PDLIM5-217ENST00000512274 PAFAH1B2P68402 229 aa7.75□□□□□ -1.17
PDLIM5-217ENST00000512274 ATP5L2Q7Z4Y8 100 aa7.75□□□□□ -1.17
PDLIM5-217ENST00000512274 PRNTQ86SH4 94 aa7.75□□□□□ -1.17
PDLIM5-217ENST00000512274 GBGT1Q8N5D6 347 aa7.75□□□□□ -1.17
PDLIM5-217ENST00000512274 ZC2HC1AQ96GY0 325 aa7.75□□□□□ -1.17
PDLIM5-217ENST00000512274 RNASE7Q9H1E1 156 aaKnown RBP7.75□□□□□ -1.17
PDLIM5-217ENST00000512274 MS4A6AQ9H2W1 248 aa7.75□□□□□ -1.17
PDLIM5-217ENST00000512274 RPP21Q9H633 154 aaKnown RBP7.75□□□□□ -1.17
PDLIM5-217ENST00000512274 IGKV2-40A0A087WW87 121 aaPredicted RBP7.74□□□□□ -1.17
PDLIM5-217ENST00000512274 ZNF705GA8MUZ8 300 aaPredicted RBP7.74□□□□□ -1.17
PDLIM5-217ENST00000512274 PRAC2D3DTV9 90 aa7.74□□□□□ -1.17
PDLIM5-217ENST00000512274 IGKV2D-40P01614 121 aaPredicted RBP7.74□□□□□ -1.17
PDLIM5-217ENST00000512274 P01737 135 aa7.74□□□□□ -1.17
PDLIM5-217ENST00000512274 HLA-DMBP28068 263 aa7.74□□□□□ -1.17
PDLIM5-217ENST00000512274 SMUG1Q53HV7 270 aa7.74□□□□□ -1.17
PDLIM5-217ENST00000512274 FAM162BQ5T6X4 162 aa7.74□□□□□ -1.17
PDLIM5-217ENST00000512274 TMEM78Q5T7P6 136 aa7.74□□□□□ -1.17
PDLIM5-217ENST00000512274 RNF182Q8N6D2 247 aa7.74□□□□□ -1.17
PDLIM5-217ENST00000512274 OR8A1Q8NGG7 326 aa7.74□□□□□ -1.17
PDLIM5-217ENST00000512274 C20orf173Q96LM9 149 aa7.74□□□□□ -1.17
PDLIM5-217ENST00000512274 CLUHP3Q96NS8 147 aa7.74□□□□□ -1.17
PDLIM5-217ENST00000512274 SPAG8Q99932 426 aaPredicted RBP7.74□□□□□ -1.17
PDLIM5-217ENST00000512274 VGLL1Q99990 258 aa7.74□□□□□ -1.17
PDLIM5-217ENST00000512274 AGPAT4-IT1Q9H0P7 198 aa7.74□□□□□ -1.17
PDLIM5-217ENST00000512274 RPH3ALQ9UNE2 315 aa7.74□□□□□ -1.17
PDLIM5-217ENST00000512274 PLECQ15149 4684 aaKnown RBP7.74□□□□□ -1.17
PDLIM5-217ENST00000512274 TGIF2-C20orf24A0A0A6YYL0 155 aa7.73□□□□□ -1.17
PDLIM5-217ENST00000512274 ZNF705FA8MVS1 300 aaPredicted RBP7.73□□□□□ -1.17
PDLIM5-217ENST00000512274 PHOX2AO14813 284 aa7.73□□□□□ -1.17
PDLIM5-217ENST00000512274 MT-ND6P03923 174 aa7.73□□□□□ -1.17
PDLIM5-217ENST00000512274 RPS20P60866 119 aaKnown RBP7.73□□□□□ -1.17
PDLIM5-217ENST00000512274 HIST1H1AQ02539 215 aaPredicted RBP7.73□□□□□ -1.17
PDLIM5-217ENST00000512274 DEFB114Q30KQ6 69 aa7.73□□□□□ -1.17
PDLIM5-217ENST00000512274 LINC00322Q6ZN03 302 aaPredicted RBP7.73□□□□□ -1.17
PDLIM5-217ENST00000512274 ZNF738Q8NE65 137 aa7.73□□□□□ -1.17
PDLIM5-217ENST00000512274 OR10J6PQ8NGY7 276 aa7.73□□□□□ -1.17
PDLIM5-217ENST00000512274 DAZAP1Q96EP5 407 aaKnown RBP7.73□□□□□ -1.17
PDLIM5-217ENST00000512274 NAT8BQ9UHF3 227 aa7.73□□□□□ -1.17
PDLIM5-217ENST00000512274 URGCP-MRPS24S4R325 110 aa7.73□□□□□ -1.17
PDLIM5-217ENST00000512274 A0A1W2PPQ1 181 aa7.72□□□□□ -1.17
PDLIM5-217ENST00000512274 XKRY2A2RUG3 117 aa7.72□□□□□ -1.17
PDLIM5-217ENST00000512274 IZUMO1RA6ND01 250 aa7.72□□□□□ -1.17
PDLIM5-217ENST00000512274 FABP5P3A8MUU1 101 aa7.72□□□□□ -1.17
PDLIM5-217ENST00000512274 MED14OSP0DP75 135 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms