RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 REG3AQ06141 175 aa3.85□□□□□ -1.79
TRAPPC11-208ENST00000511955 BSPH1Q075Z2 132 aa3.85□□□□□ -1.79
TRAPPC11-208ENST00000511955 ADIRFQ15847 76 aa3.85□□□□□ -1.79
TRAPPC11-208ENST00000511955 FBXL19-AS1Q494R0 122 aa3.85□□□□□ -1.79
TRAPPC11-208ENST00000511955 KLF17Q5JT82 389 aaPredicted RBP3.85□□□□□ -1.79
TRAPPC11-208ENST00000511955 BVES-AS1Q5T3Y7 98 aa3.85□□□□□ -1.79
TRAPPC11-208ENST00000511955 ZNF880Q6PDB4 577 aa3.85□□□□□ -1.79
TRAPPC11-208ENST00000511955 LINC00311Q8N616 119 aa3.85□□□□□ -1.79
TRAPPC11-208ENST00000511955 Q8N976 141 aa3.85□□□□□ -1.79
TRAPPC11-208ENST00000511955 OR4X2Q8NGF9 303 aa3.85□□□□□ -1.79
TRAPPC11-208ENST00000511955 NTN5Q8WTR8 489 aaPredicted RBP3.85□□□□□ -1.79
TRAPPC11-208ENST00000511955 IGFBPL1Q8WX77 278 aa3.85□□□□□ -1.79
TRAPPC11-208ENST00000511955 AQP3Q92482 292 aa3.85□□□□□ -1.79
TRAPPC11-208ENST00000511955 NEUROG1Q92886 237 aa3.85□□□□□ -1.79
TRAPPC11-208ENST00000511955 IMUPQ9GZP8 106 aa3.85□□□□□ -1.79
TRAPPC11-208ENST00000511955 TAAR3PQ9P1P4 343 aa3.85□□□□□ -1.79
TRAPPC11-208ENST00000511955 AK3Q9UIJ7 227 aa3.85□□□□□ -1.79
TRAPPC11-208ENST00000511955 MPC1Q9Y5U8 109 aa3.85□□□□□ -1.79
TRAPPC11-208ENST00000511955 LINC00312Q9Y6C7 94 aa3.85□□□□□ -1.79
TRAPPC11-208ENST00000511955 CREBBPQ92793 2442 aa3.85□□□□□ -1.79
TRAPPC11-208ENST00000511955 A0A1W2PPR1 153 aa3.84□□□□□ -1.79
TRAPPC11-208ENST00000511955 IZUMO1RA6ND01 250 aa3.84□□□□□ -1.79
TRAPPC11-208ENST00000511955 OOSP1A8MZH6 123 aa3.84□□□□□ -1.79
TRAPPC11-208ENST00000511955 LGALS9O00182 355 aa3.84□□□□□ -1.79
TRAPPC11-208ENST00000511955 UPK2O00526 184 aa3.84□□□□□ -1.79
TRAPPC11-208ENST00000511955 PSMB8P28062 276 aa3.84□□□□□ -1.79
TRAPPC11-208ENST00000511955 TMEM258P61165 79 aa3.84□□□□□ -1.79
TRAPPC11-208ENST00000511955 YPEL3P61236 119 aaPredicted RBP3.84□□□□□ -1.79
TRAPPC11-208ENST00000511955 KTN1-AS1Q86SY8 53 aa3.84□□□□□ -1.79
TRAPPC11-208ENST00000511955 MKXQ8IYA7 352 aa3.84□□□□□ -1.79
TRAPPC11-208ENST00000511955 TMEM256Q8N2U0 113 aa3.84□□□□□ -1.79
TRAPPC11-208ENST00000511955 CYB561D1Q8N8Q1 229 aa3.84□□□□□ -1.79
TRAPPC11-208ENST00000511955 MANBALQ9NQG1 85 aa3.84□□□□□ -1.79
TRAPPC11-208ENST00000511955 IGHV3OR16-9A0A0B4J2B5 98 aa3.84□□□□□ -1.79
TRAPPC11-208ENST00000511955 TRBV12-3P01733 135 aa3.84□□□□□ -1.79
TRAPPC11-208ENST00000511955 PRH1P02810 166 aa3.84□□□□□ -1.79
TRAPPC11-208ENST00000511955 VDAC1P21796 283 aa3.84□□□□□ -1.79
TRAPPC11-208ENST00000511955 NMUP48645 174 aa3.84□□□□□ -1.79
TRAPPC11-208ENST00000511955 ICAM4Q14773 271 aa3.84□□□□□ -1.79
TRAPPC11-208ENST00000511955 PMCHL1Q16048 86 aa3.84□□□□□ -1.79
TRAPPC11-208ENST00000511955 WDR38Q5JTN6 314 aa3.84□□□□□ -1.79
TRAPPC11-208ENST00000511955 GTSCR1Q86UQ5 136 aa3.84□□□□□ -1.79
TRAPPC11-208ENST00000511955 MDP1Q86V88 176 aa3.84□□□□□ -1.79
TRAPPC11-208ENST00000511955 SLC25A42Q86VD7 318 aa3.84□□□□□ -1.79
TRAPPC11-208ENST00000511955 ATOH7Q8N100 152 aa3.84□□□□□ -1.79
TRAPPC11-208ENST00000511955 DCANP1Q8TF63 244 aa3.84□□□□□ -1.79
TRAPPC11-208ENST00000511955 GNPNAT1Q96EK6 184 aaPredicted RBP3.84□□□□□ -1.79
TRAPPC11-208ENST00000511955 TTTY10Q9BZA0 68 aa3.84□□□□□ -1.79
TRAPPC11-208ENST00000511955 MSRB1Q9NZV6 116 aa3.84□□□□□ -1.79
TRAPPC11-208ENST00000511955 ITPR3Q14573 2671 aa3.84□□□□□ -1.8
TRAPPC11-208ENST00000511955 ZANQ9Y493 2812 aa3.84□□□□□ -1.8
TRAPPC11-208ENST00000511955 TRAV13-1A0A0B4J241 112 aa3.83□□□□□ -1.8
TRAPPC11-208ENST00000511955 TRAV41A0A0B4J266 112 aa3.83□□□□□ -1.8
TRAPPC11-208ENST00000511955 A0A0J9YXV3 536 aa3.83□□□□□ -1.8
TRAPPC11-208ENST00000511955 DPRXA6NFQ7 191 aa3.83□□□□□ -1.8
TRAPPC11-208ENST00000511955 H3BMG7 143 aa3.83□□□□□ -1.8
TRAPPC11-208ENST00000511955 K7N7A8 449 aa3.83□□□□□ -1.8
TRAPPC11-208ENST00000511955 CECR9P0C854 216 aa3.83□□□□□ -1.8
TRAPPC11-208ENST00000511955 CRISP2P16562 243 aa3.83□□□□□ -1.8
TRAPPC11-208ENST00000511955 GATA2P23769 480 aaPredicted RBP3.83□□□□□ -1.8
TRAPPC11-208ENST00000511955 FCGR2CP31995 323 aa3.83□□□□□ -1.8
TRAPPC11-208ENST00000511955 LINC00173Q6ZV60 143 aa3.83□□□□□ -1.8
TRAPPC11-208ENST00000511955 C3orf56Q8N813 242 aa3.83□□□□□ -1.8
TRAPPC11-208ENST00000511955 SPANXDQ9BXN6 97 aa3.83□□□□□ -1.8
TRAPPC11-208ENST00000511955 ST20Q9HBF5 79 aa3.83□□□□□ -1.8
TRAPPC11-208ENST00000511955 SDF2L1Q9HCN8 221 aa3.83□□□□□ -1.8
TRAPPC11-208ENST00000511955 CKLFQ9UBR5 152 aa3.83□□□□□ -1.8
TRAPPC11-208ENST00000511955 OR5V1Q9UGF6 321 aa3.83□□□□□ -1.8
TRAPPC11-208ENST00000511955 SLC25A15Q9Y619 301 aa3.83□□□□□ -1.8
TRAPPC11-208ENST00000511955 TEP1Q99973 2627 aaKnown RBP3.83□□□□□ -1.8
TRAPPC11-208ENST00000511955 PLCE1Q9P212 2302 aa3.83□□□□□ -1.8
TRAPPC11-208ENST00000511955 RTTNQ86VV8 2226 aa3.83□□□□□ -1.8
TRAPPC11-208ENST00000511955 IGHV1-18A0A0C4DH31 117 aa3.83□□□□□ -1.8
TRAPPC11-208ENST00000511955 MUC21A0A140T8X8 626 aa3.83□□□□□ -1.8
TRAPPC11-208ENST00000511955 A8MUN3 132 aa3.83□□□□□ -1.8
TRAPPC11-208ENST00000511955 DEFB108AA8MXU0 73 aa3.83□□□□□ -1.8
TRAPPC11-208ENST00000511955 NUPR1O60356 82 aa3.83□□□□□ -1.8
TRAPPC11-208ENST00000511955 ZNF253O75346 499 aa3.83□□□□□ -1.8
TRAPPC11-208ENST00000511955 PYYP10082 97 aa3.83□□□□□ -1.8
TRAPPC11-208ENST00000511955 ZNF32P17041 273 aa3.83□□□□□ -1.8
TRAPPC11-208ENST00000511955 CRYGSP22914 178 aa3.83□□□□□ -1.8
TRAPPC11-208ENST00000511955 MPV17L2Q567V2 206 aa3.83□□□□□ -1.8
TRAPPC11-208ENST00000511955 MUC21Q5SSG8 566 aa3.83□□□□□ -1.8
TRAPPC11-208ENST00000511955 Q6ZS49 121 aa3.83□□□□□ -1.8
TRAPPC11-208ENST00000511955 OR10P1Q8NGE3 313 aa3.83□□□□□ -1.8
TRAPPC11-208ENST00000511955 OR10G8Q8NGN5 311 aa3.83□□□□□ -1.8
TRAPPC11-208ENST00000511955 OR5C1Q8NGR4 320 aa3.83□□□□□ -1.8
TRAPPC11-208ENST00000511955 NABP1Q96AH0 204 aa3.83□□□□□ -1.8
TRAPPC11-208ENST00000511955 RBMXL1Q96E39 390 aaKnown RBP3.83□□□□□ -1.8
TRAPPC11-208ENST00000511955 TMEM204Q9BSN7 226 aa3.83□□□□□ -1.8
TRAPPC11-208ENST00000511955 ZNF747Q9BV97 191 aa3.83□□□□□ -1.8
TRAPPC11-208ENST00000511955 PARP12Q9H0J9 701 aaKnown RBP3.83□□□□□ -1.8
TRAPPC11-208ENST00000511955 CMC2Q9NRP2 79 aa3.83□□□□□ -1.8
TRAPPC11-208ENST00000511955 XCL2Q9UBD3 114 aa3.83□□□□□ -1.8
TRAPPC11-208ENST00000511955 FLNAP21333 2647 aaKnown RBP3.82□□□□□ -1.8
TRAPPC11-208ENST00000511955 USF3Q68DE3 2245 aa3.82□□□□□ -1.8
TRAPPC11-208ENST00000511955 TRBV20OR9-2A0A075B6H5 130 aa3.82□□□□□ -1.8
TRAPPC11-208ENST00000511955 TRAV9-1A0A075B6T8 112 aa3.82□□□□□ -1.8
TRAPPC11-208ENST00000511955 IGHV1-69DA0A0B4J2H0 117 aa3.82□□□□□ -1.8
TRAPPC11-208ENST00000511955 C9orf118A6NHY6 69 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms