RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 C7orf66A4D0T2 115 aa12.45□□□□□ -0.42
HMGCS1-206ENST00000511774 HIST1H1EP10412 219 aaKnown RBP12.45□□□□□ -0.42
HMGCS1-206ENST00000511774 FAUP35544 74 aaKnown RBP12.45□□□□□ -0.42
HMGCS1-206ENST00000511774 TMEM183BQ1AE95 376 aa12.45□□□□□ -0.42
HMGCS1-206ENST00000511774 OR10J3Q5JRS4 329 aa12.45□□□□□ -0.42
HMGCS1-206ENST00000511774 TMEM78Q5T7P6 136 aa12.45□□□□□ -0.42
HMGCS1-206ENST00000511774 TMEM183AQ8IXX5 376 aa12.45□□□□□ -0.42
HMGCS1-206ENST00000511774 DAZAP1Q96EP5 407 aaKnown RBP12.45□□□□□ -0.42
HMGCS1-206ENST00000511774 TMEM14CQ9P0S9 112 aa12.45□□□□□ -0.42
HMGCS1-206ENST00000511774 FABP12A6NFH5 140 aa12.44□□□□□ -0.42
HMGCS1-206ENST00000511774 GATA1P15976 413 aaPredicted RBP12.44□□□□□ -0.42
HMGCS1-206ENST00000511774 TAS2R30P59541 319 aa12.44□□□□□ -0.42
HMGCS1-206ENST00000511774 Q6ZRG5 221 aa12.44□□□□□ -0.42
HMGCS1-206ENST00000511774 OR4C5Q8NGB2 326 aa12.44□□□□□ -0.42
HMGCS1-206ENST00000511774 BAALCQ8WXS3 180 aa12.44□□□□□ -0.42
HMGCS1-206ENST00000511774 TIMM9Q9Y5J7 89 aa12.44□□□□□ -0.42
HMGCS1-206ENST00000511774 TRAV8-6A0A0B4J262 113 aa12.43□□□□□ -0.42
HMGCS1-206ENST00000511774 PDE6HQ13956 83 aa12.43□□□□□ -0.42
HMGCS1-206ENST00000511774 LAGE3Q14657 143 aa12.43□□□□□ -0.42
HMGCS1-206ENST00000511774 SH2D6Q7Z4S9 175 aa12.43□□□□□ -0.42
HMGCS1-206ENST00000511774 TOMM5Q8N4H5 51 aa12.43□□□□□ -0.42
HMGCS1-206ENST00000511774 OR1L4Q8NGR5 311 aa12.43□□□□□ -0.42
HMGCS1-206ENST00000511774 SPXQ9BT56 116 aa12.43□□□□□ -0.42
HMGCS1-206ENST00000511774 TM2D2Q9BX73 214 aa12.43□□□□□ -0.42
HMGCS1-206ENST00000511774 SLC39A9Q9NUM3 307 aa12.43□□□□□ -0.42
HMGCS1-206ENST00000511774 IGLV2-8P01709 118 aa12.42□□□□□ -0.42
HMGCS1-206ENST00000511774 MBPP02686 304 aaPredicted RBP12.42□□□□□ -0.42
HMGCS1-206ENST00000511774 ZNF138P52744 262 aa12.42□□□□□ -0.42
HMGCS1-206ENST00000511774 ZNF266Q14584 549 aa12.42□□□□□ -0.42
HMGCS1-206ENST00000511774 GCSAMLQ5JQS6 135 aa12.42□□□□□ -0.42
HMGCS1-206ENST00000511774 FLVCR2Q9UPI3 526 aa12.42□□□□□ -0.42
HMGCS1-206ENST00000511774 WDR83OSQ9Y284 106 aa12.42□□□□□ -0.42
HMGCS1-206ENST00000511774 UBE2MP61081 183 aaKnown RBP12.41□□□□□ -0.42
HMGCS1-206ENST00000511774 IAH1Q2TAA2 248 aaPredicted RBP12.41□□□□□ -0.42
HMGCS1-206ENST00000511774 PFDN5Q99471 154 aa12.41□□□□□ -0.42
HMGCS1-206ENST00000511774 SLIRPQ9GZT3 109 aaKnown RBP12.41□□□□□ -0.42
HMGCS1-206ENST00000511774 GNRH2O43555 120 aa12.4□□□□□ -0.42
HMGCS1-206ENST00000511774 LELP1Q5T871 98 aa12.4□□□□□ -0.42
HMGCS1-206ENST00000511774 Q6AWC8 147 aa12.4□□□□□ -0.42
HMGCS1-206ENST00000511774 SLC25A29Q8N8R3 303 aa12.4□□□□□ -0.42
HMGCS1-206ENST00000511774 FAM167A-AS1Q96KT0 104 aa12.4□□□□□ -0.42
HMGCS1-206ENST00000511774 DNAJC30Q96LL9 226 aa12.4□□□□□ -0.42
HMGCS1-206ENST00000511774 SLC25A2Q9BXI2 301 aa12.4□□□□□ -0.42
HMGCS1-206ENST00000511774 GSKIPQ9P0R6 139 aa12.4□□□□□ -0.42
HMGCS1-206ENST00000511774 CST7O76096 145 aa12.39□□□□□ -0.43
HMGCS1-206ENST00000511774 RPL29P47914 159 aaKnown RBP12.39□□□□□ -0.43
HMGCS1-206ENST00000511774 AAMDCQ9H7C9 122 aa12.39□□□□□ -0.43
HMGCS1-206ENST00000511774 TRBV7-9A0A0J9YWB2 115 aa12.38□□□□□ -0.43
HMGCS1-206ENST00000511774 RBFOX3A6NFN3 312 aa12.38□□□□□ -0.43
HMGCS1-206ENST00000511774 M0R2P5 195 aa12.38□□□□□ -0.43
HMGCS1-206ENST00000511774 RS1O15537 224 aa12.38□□□□□ -0.43
HMGCS1-206ENST00000511774 AP3S2P59780 193 aa12.38□□□□□ -0.43
HMGCS1-206ENST00000511774 BAK1Q16611 211 aa12.38□□□□□ -0.43
HMGCS1-206ENST00000511774 PYDC2Q56P42 97 aa12.38□□□□□ -0.43
HMGCS1-206ENST00000511774 DAZ4Q86SG3 579 aaKnown RBP12.38□□□□□ -0.43
HMGCS1-206ENST00000511774 C12orf45Q8N5I9 185 aaPredicted RBP12.38□□□□□ -0.43
HMGCS1-206ENST00000511774 C11orf1Q9H5F2 150 aa12.38□□□□□ -0.43
HMGCS1-206ENST00000511774 DAZ3Q9NR90 486 aaKnown RBP12.38□□□□□ -0.43
HMGCS1-206ENST00000511774 V9GYH0 126 aa12.38□□□□□ -0.43
HMGCS1-206ENST00000511774 TRGV11A0A075B6L2 103 aa12.37□□□□□ -0.43
HMGCS1-206ENST00000511774 PFN1P07737 140 aaKnown RBP12.37□□□□□ -0.43
HMGCS1-206ENST00000511774 RPL37AP61513 92 aaKnown RBP12.37□□□□□ -0.43
HMGCS1-206ENST00000511774 RAB31Q13636 194 aa12.37□□□□□ -0.43
HMGCS1-206ENST00000511774 VWC2Q2TAL6 325 aa12.37□□□□□ -0.43
HMGCS1-206ENST00000511774 PHYHIPLQ96FC7 376 aa12.37□□□□□ -0.43
HMGCS1-206ENST00000511774 UQCC1Q9NVA1 299 aa12.37□□□□□ -0.43
HMGCS1-206ENST00000511774 UBE2L5PA0A1B0GUS4 154 aa12.36□□□□□ -0.43
HMGCS1-206ENST00000511774 RNF222A6NCQ9 220 aa12.36□□□□□ -0.43
HMGCS1-206ENST00000511774 FAM24AA6NFZ4 105 aa12.36□□□□□ -0.43
HMGCS1-206ENST00000511774 CAV2P51636 162 aa12.36□□□□□ -0.43
HMGCS1-206ENST00000511774 TDRG1Q3Y452 100 aa12.36□□□□□ -0.43
HMGCS1-206ENST00000511774 DPPA3Q6W0C5 159 aa12.36□□□□□ -0.43
HMGCS1-206ENST00000511774 NAGKQ9UJ70 344 aa12.36□□□□□ -0.43
HMGCS1-206ENST00000511774 NBEAP1P0C6P0 100 aa12.35□□□□□ -0.43
HMGCS1-206ENST00000511774 ASAH1Q13510 395 aa12.35□□□□□ -0.43
HMGCS1-206ENST00000511774 FAM159AQ6UWV7 190 aa12.35□□□□□ -0.43
HMGCS1-206ENST00000511774 MIR17HGQ75NE6 70 aa12.35□□□□□ -0.43
HMGCS1-206ENST00000511774 GTSF1LQ9H1H1 148 aa12.35□□□□□ -0.43
HMGCS1-206ENST00000511774 GPN1Q9HCN4 374 aaPredicted RBP12.35□□□□□ -0.43
HMGCS1-206ENST00000511774 IGHV3-73A0A0B4J1V6 119 aa12.34□□□□□ -0.43
HMGCS1-206ENST00000511774 CCSO14618 274 aa12.34□□□□□ -0.43
HMGCS1-206ENST00000511774 BAXQ07812 192 aa12.34□□□□□ -0.43
HMGCS1-206ENST00000511774 FXYD5Q96DB9 178 aa12.34□□□□□ -0.43
HMGCS1-206ENST00000511774 TRAV8-3A0A0A6YYJ7 113 aa12.33□□□□□ -0.44
HMGCS1-206ENST00000511774 FBLL1A6NHQ2 334 aaKnown RBP12.33□□□□□ -0.44
HMGCS1-206ENST00000511774 NDUFB6O95139 128 aa12.33□□□□□ -0.44
HMGCS1-206ENST00000511774 TYMSP04818 313 aa12.33□□□□□ -0.44
HMGCS1-206ENST00000511774 OR10J4P0C629 311 aa12.33□□□□□ -0.44
HMGCS1-206ENST00000511774 CHAC2Q8WUX2 184 aa12.33□□□□□ -0.44
HMGCS1-206ENST00000511774 LSM5Q9Y4Y9 91 aaKnown RBP12.33□□□□□ -0.44
HMGCS1-206ENST00000511774 IGLV2-11P01706 119 aa12.32□□□□□ -0.44
HMGCS1-206ENST00000511774 BCAP31P51572 246 aa12.32□□□□□ -0.44
HMGCS1-206ENST00000511774 ACOT6Q3I5F7 207 aaPredicted RBP12.32□□□□□ -0.44
HMGCS1-206ENST00000511774 CFAP126Q5VTH2 177 aa12.32□□□□□ -0.44
HMGCS1-206ENST00000511774 ATP6V0E2Q8NHE4 81 aa12.32□□□□□ -0.44
HMGCS1-206ENST00000511774 C20orf85Q9H1P6 137 aa12.32□□□□□ -0.44
HMGCS1-206ENST00000511774 BOLA1Q9Y3E2 137 aa12.32□□□□□ -0.44
HMGCS1-206ENST00000511774 TRBV6-4A0A1B0GX49 114 aa12.31□□□□□ -0.44
HMGCS1-206ENST00000511774 IGSF23A1L1A6 192 aa12.31□□□□□ -0.44
HMGCS1-206ENST00000511774 RBAKDNA6NC62 111 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms