RNA–Protein interactions for RNA: ENST00000510948.1

SMAD1-208, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-208ENST00000510948 OR51G1Q8NGK1 321 aa3.08□□□□□ -1.92
SMAD1-208ENST00000510948 MYOZ3Q8TDC0 251 aa3.08□□□□□ -1.92
SMAD1-208ENST00000510948 CHCHD10Q8WYQ3 142 aaPredicted RBP3.08□□□□□ -1.92
SMAD1-208ENST00000510948 HIST1H4GQ99525 98 aa3.08□□□□□ -1.92
SMAD1-208ENST00000510948 PYGO2Q9BRQ0 406 aa3.08□□□□□ -1.92
SMAD1-208ENST00000510948 ACTR3CQ9C0K3 210 aaPredicted RBP3.08□□□□□ -1.92
SMAD1-208ENST00000510948 TNFRSF19Q9NS68 423 aa3.08□□□□□ -1.92
SMAD1-208ENST00000510948 ZNF355PQ9NSJ1 428 aa3.08□□□□□ -1.92
SMAD1-208ENST00000510948 CSDC2Q9Y534 153 aaKnown RBP3.08□□□□□ -1.92
SMAD1-208ENST00000510948 S4R3C0 116 aa3.08□□□□□ -1.92
SMAD1-208ENST00000510948 ARL2-SNX15V9GYD0 113 aa3.08□□□□□ -1.92
SMAD1-208ENST00000510948 C2CD3Q4AC94 2353 aa3.08□□□□□ -1.92
SMAD1-208ENST00000510948 A0A1W2PPV4 95 aa3.07□□□□□ -1.92
SMAD1-208ENST00000510948 WI2-2373I1.2A0A1W2PRP0 233 aa3.07□□□□□ -1.92
SMAD1-208ENST00000510948 OR2T8A6NH00 312 aa3.07□□□□□ -1.92
SMAD1-208ENST00000510948 HMGB3O15347 200 aaKnown RBP3.07□□□□□ -1.92
SMAD1-208ENST00000510948 NUPL2O15504 423 aaKnown RBP3.07□□□□□ -1.92
SMAD1-208ENST00000510948 TGOLN2O43493 480 aa3.07□□□□□ -1.92
SMAD1-208ENST00000510948 COX7A2P2O60397 106 aa3.07□□□□□ -1.92
SMAD1-208ENST00000510948 SNAPINO95295 136 aa3.07□□□□□ -1.92
SMAD1-208ENST00000510948 CXorf1O96002 111 aa3.07□□□□□ -1.92
SMAD1-208ENST00000510948 HSPB1P04792 205 aaKnown RBP3.07□□□□□ -1.92
SMAD1-208ENST00000510948 CD5P06127 495 aa3.07□□□□□ -1.92
SMAD1-208ENST00000510948 CTSGP08311 255 aa3.07□□□□□ -1.92
SMAD1-208ENST00000510948 C8orf88P0DMB2 117 aa3.07□□□□□ -1.92
SMAD1-208ENST00000510948 CD99P14209 185 aa3.07□□□□□ -1.92
SMAD1-208ENST00000510948 S100A1P23297 94 aa3.07□□□□□ -1.92
SMAD1-208ENST00000510948 PSMB3P49720 205 aa3.07□□□□□ -1.92
SMAD1-208ENST00000510948 RIPPLY3P57055 190 aa3.07□□□□□ -1.92
SMAD1-208ENST00000510948 DSCR10P59022 87 aa3.07□□□□□ -1.92
SMAD1-208ENST00000510948 TAS2R45P59539 299 aa3.07□□□□□ -1.92
SMAD1-208ENST00000510948 LYZP61626 148 aa3.07□□□□□ -1.92
SMAD1-208ENST00000510948 SLC35B1P78383 322 aa3.07□□□□□ -1.92
SMAD1-208ENST00000510948 USF2Q15853 346 aaPredicted RBP3.07□□□□□ -1.92
SMAD1-208ENST00000510948 GUK1Q16774 197 aa3.07□□□□□ -1.92
SMAD1-208ENST00000510948 C10orf113Q5VZT2 155 aa3.07□□□□□ -1.92
SMAD1-208ENST00000510948 PATE2Q6UY27 113 aa3.07□□□□□ -1.92
SMAD1-208ENST00000510948 MIR17HGQ75NE6 70 aa3.07□□□□□ -1.92
SMAD1-208ENST00000510948 LINC00305Q7Z4B0 112 aa3.07□□□□□ -1.92
SMAD1-208ENST00000510948 SUN5Q8TC36 379 aa3.07□□□□□ -1.92
SMAD1-208ENST00000510948 ZNF418Q8TF45 676 aaPredicted RBP3.07□□□□□ -1.92
SMAD1-208ENST00000510948 SFT2D1Q8WV19 159 aa3.07□□□□□ -1.92
SMAD1-208ENST00000510948 MARC2Q969Z3 335 aa3.07□□□□□ -1.92
SMAD1-208ENST00000510948 USMG5Q96IX5 58 aa3.07□□□□□ -1.92
SMAD1-208ENST00000510948 FAM167A-AS1Q96KT0 104 aa3.07□□□□□ -1.92
SMAD1-208ENST00000510948 LINC00052Q96N35 136 aa3.07□□□□□ -1.92
SMAD1-208ENST00000510948 PBDC1Q9BVG4 233 aa3.07□□□□□ -1.92
SMAD1-208ENST00000510948 SCRT1Q9BWW7 348 aa3.07□□□□□ -1.92
SMAD1-208ENST00000510948 SLC25A2Q9BXI2 301 aa3.07□□□□□ -1.92
SMAD1-208ENST00000510948 SMDT1Q9H4I9 107 aa3.07□□□□□ -1.92
SMAD1-208ENST00000510948 MANBALQ9NQG1 85 aa3.07□□□□□ -1.92
SMAD1-208ENST00000510948 MRPL27Q9P0M9 148 aaKnown RBP3.07□□□□□ -1.92
SMAD1-208ENST00000510948 DOK5Q9P104 306 aa3.07□□□□□ -1.92
SMAD1-208ENST00000510948 PUS1Q9Y606 427 aaKnown RBP eCLIP3.07□□□□□ -1.92
SMAD1-208ENST00000510948 MAST4O15021 2626 aa3.07□□□□□ -1.92
SMAD1-208ENST00000510948 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.06□□□□□ -1.92
SMAD1-208ENST00000510948 A0A0G2JLM5 398 aa3.06□□□□□ -1.92
SMAD1-208ENST00000510948 RBFOX3A6NFN3 312 aa3.06□□□□□ -1.92
SMAD1-208ENST00000510948 KRBOX1C9JBD0 128 aa3.06□□□□□ -1.92
SMAD1-208ENST00000510948 NDUFA4O00483 81 aa3.06□□□□□ -1.92
SMAD1-208ENST00000510948 MRPS12O15235 138 aaKnown RBP3.06□□□□□ -1.92
SMAD1-208ENST00000510948 OR7C2O60412 319 aa3.06□□□□□ -1.92
SMAD1-208ENST00000510948 NDUFS6O75380 124 aaKnown RBP3.06□□□□□ -1.92
SMAD1-208ENST00000510948 HYPMO75409 117 aa3.06□□□□□ -1.92
SMAD1-208ENST00000510948 TRBV12-3P01733 135 aa3.06□□□□□ -1.92
SMAD1-208ENST00000510948 LGALS1P09382 135 aaKnown RBP3.06□□□□□ -1.92
SMAD1-208ENST00000510948 SFTA3P0C7M3 94 aa3.06□□□□□ -1.92
SMAD1-208ENST00000510948 PYYP10082 97 aa3.06□□□□□ -1.92
SMAD1-208ENST00000510948 ORM2P19652 201 aa3.06□□□□□ -1.92
SMAD1-208ENST00000510948 NF1P21359 2839 aa3.06□□□□□ -1.92
SMAD1-208ENST00000510948 ATP5G3P48201 142 aa3.06□□□□□ -1.92
SMAD1-208ENST00000510948 RAB9AP51151 201 aa3.06□□□□□ -1.92
SMAD1-208ENST00000510948 UBE2L3P68036 154 aaKnown RBP3.06□□□□□ -1.92
SMAD1-208ENST00000510948 CCL20P78556 96 aa3.06□□□□□ -1.92
SMAD1-208ENST00000510948 MEF2BQ02080 365 aaPredicted RBP3.06□□□□□ -1.92
SMAD1-208ENST00000510948 C10orf99Q6UWK7 81 aa3.06□□□□□ -1.92
SMAD1-208ENST00000510948 CLEC19AQ6UXS0 136 aa3.06□□□□□ -1.92
SMAD1-208ENST00000510948 IQCF2Q8IXL9 164 aa3.06□□□□□ -1.92
SMAD1-208ENST00000510948 C6orf223Q8N319 242 aa3.06□□□□□ -1.92
SMAD1-208ENST00000510948 TXNDC17Q9BRA2 123 aa3.06□□□□□ -1.92
SMAD1-208ENST00000510948 SHANK2-AS3Q9BTD1 123 aa3.06□□□□□ -1.92
SMAD1-208ENST00000510948 SLC25A39Q9BZJ4 359 aaPredicted RBP3.06□□□□□ -1.92
SMAD1-208ENST00000510948 GNG13Q9P2W3 67 aa3.06□□□□□ -1.92
SMAD1-208ENST00000510948 VAX2Q9UIW0 290 aa3.06□□□□□ -1.92
SMAD1-208ENST00000510948 HIGD1AQ9Y241 93 aa3.06□□□□□ -1.92
SMAD1-208ENST00000510948 CARHSP1Q9Y2V2 147 aaKnown RBP3.06□□□□□ -1.92
SMAD1-208ENST00000510948 SETD2Q9BYW2 2564 aaPredicted RBP3.05□□□□□ -1.92
SMAD1-208ENST00000510948 IGHV3OR16-13A0A075B7E8 117 aa3.05□□□□□ -1.92
SMAD1-208ENST00000510948 TMEM218A2RU14 115 aa3.05□□□□□ -1.92
SMAD1-208ENST00000510948 CLPSL1A2RUU4 121 aa3.05□□□□□ -1.92
SMAD1-208ENST00000510948 CYSRT1A8MQ03 144 aa3.05□□□□□ -1.92
SMAD1-208ENST00000510948 A8MWP6 167 aa3.05□□□□□ -1.92
SMAD1-208ENST00000510948 GGTLC3B5MD39 225 aa3.05□□□□□ -1.92
SMAD1-208ENST00000510948 C9JQL5 133 aa3.05□□□□□ -1.92
SMAD1-208ENST00000510948 C11orf94C9JXX5 98 aa3.05□□□□□ -1.92
SMAD1-208ENST00000510948 PPP5D1E7EU14 171 aa3.05□□□□□ -1.92
SMAD1-208ENST00000510948 TMEM250H0YL14 139 aa3.05□□□□□ -1.92
SMAD1-208ENST00000510948 TCF21O43680 179 aa3.05□□□□□ -1.92
SMAD1-208ENST00000510948 IGHV3-11P01762 117 aa3.05□□□□□ -1.92
SMAD1-208ENST00000510948 SRP19P09132 144 aaKnown RBP3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms