RNA–Protein interactions for RNA: ENST00000510852.1

USP53-207, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 2,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-207ENST00000510852 OR8B2Q96RD0 313 aa7.4□□□□□ -1.23
USP53-207ENST00000510852 TM2D3Q9BRN9 247 aa7.4□□□□□ -1.23
USP53-207ENST00000510852 ZNF286AQ9HBT8 521 aa7.4□□□□□ -1.23
USP53-207ENST00000510852 OR2W1Q9Y3N9 320 aa7.4□□□□□ -1.23
USP53-207ENST00000510852 IGHV4-30-2A0A087WSY4 118 aa7.39□□□□□ -1.23
USP53-207ENST00000510852 IZUMO1RA6ND01 250 aa7.39□□□□□ -1.23
USP53-207ENST00000510852 TRGC2P03986 189 aa7.39□□□□□ -1.23
USP53-207ENST00000510852 DSCR9P59020 149 aa7.39□□□□□ -1.23
USP53-207ENST00000510852 Q6ZS49 121 aa7.39□□□□□ -1.23
USP53-207ENST00000510852 OR10G8Q8NGN5 311 aa7.39□□□□□ -1.23
USP53-207ENST00000510852 RFESDQ8TAC1 157 aa7.39□□□□□ -1.23
USP53-207ENST00000510852 TMEM262E9PQX1 116 aa7.39□□□□□ -1.23
USP53-207ENST00000510852 H0Y9J4 135 aa7.39□□□□□ -1.23
USP53-207ENST00000510852 APOMO95445 188 aa7.39□□□□□ -1.23
USP53-207ENST00000510852 ZNF660Q6AZW8 331 aaPredicted RBP7.39□□□□□ -1.23
USP53-207ENST00000510852 H1FXQ92522 213 aaKnown RBP7.39□□□□□ -1.23
USP53-207ENST00000510852 ANKRD17O75179 2603 aaKnown RBP7.39□□□□□ -1.23
USP53-207ENST00000510852 LYRM1O43325 122 aa7.38□□□□□ -1.23
USP53-207ENST00000510852 YPEL1O60688 119 aa7.38□□□□□ -1.23
USP53-207ENST00000510852 NXPH3O95157 252 aa7.38□□□□□ -1.23
USP53-207ENST00000510852 AMTNQ6UX39 209 aa7.38□□□□□ -1.23
USP53-207ENST00000510852 CLEC19AQ6UXS0 136 aa7.38□□□□□ -1.23
USP53-207ENST00000510852 C3orf56Q8N813 242 aa7.38□□□□□ -1.23
USP53-207ENST00000510852 OR5H2Q8NGV7 314 aa7.38□□□□□ -1.23
USP53-207ENST00000510852 CLDND2Q8NHS1 167 aa7.38□□□□□ -1.23
USP53-207ENST00000510852 UBALD1Q8TB05 177 aa7.38□□□□□ -1.23
USP53-207ENST00000510852 YPEL2Q96QA6 119 aa7.38□□□□□ -1.23
USP53-207ENST00000510852 MAP1AP78559 2803 aaPredicted RBP7.38□□□□□ -1.23
USP53-207ENST00000510852 IGHV4-61A0A0C4DH41 118 aa7.38□□□□□ -1.23
USP53-207ENST00000510852 C7orf66A4D0T2 115 aa7.38□□□□□ -1.23
USP53-207ENST00000510852 C12orf77C9JDV5 145 aa7.38□□□□□ -1.23
USP53-207ENST00000510852 CRISP2P16562 243 aa7.38□□□□□ -1.23
USP53-207ENST00000510852 NFYAP23511 347 aaPredicted RBP7.38□□□□□ -1.23
USP53-207ENST00000510852 LMO4P61968 165 aa7.38□□□□□ -1.23
USP53-207ENST00000510852 SRSF9Q13242 221 aaKnown RBP eCLIP7.38□□□□□ -1.23
USP53-207ENST00000510852 MSMO1Q15800 293 aa7.38□□□□□ -1.23
USP53-207ENST00000510852 SLC25A34Q6PIV7 304 aa7.38□□□□□ -1.23
USP53-207ENST00000510852 ZNF491Q8N8L2 437 aa7.38□□□□□ -1.23
USP53-207ENST00000510852 C11orf72Q8NBR9 251 aa7.38□□□□□ -1.23
USP53-207ENST00000510852 OR11H7Q8NGC8 314 aa7.38□□□□□ -1.23
USP53-207ENST00000510852 OR2T10Q8NGZ9 312 aa7.38□□□□□ -1.23
USP53-207ENST00000510852 LINC00526Q96FQ7 95 aa7.38□□□□□ -1.23
USP53-207ENST00000510852 CACFD1Q9UGQ2 172 aa7.38□□□□□ -1.23
USP53-207ENST00000510852 ITPR2Q14571 2701 aa7.38□□□□□ -1.23
USP53-207ENST00000510852 IGKV1-6A0A0C4DH72 117 aa7.37□□□□□ -1.23
USP53-207ENST00000510852 SDCBPO00560 298 aaPredicted RBP7.37□□□□□ -1.23
USP53-207ENST00000510852 TNFSF12O43508 249 aa7.37□□□□□ -1.23
USP53-207ENST00000510852 FAUP35544 74 aaKnown RBP7.37□□□□□ -1.23
USP53-207ENST00000510852 GNB2P62879 340 aa7.37□□□□□ -1.23
USP53-207ENST00000510852 ABCA11PQ4W5N1 156 aa7.37□□□□□ -1.23
USP53-207ENST00000510852 MALRD1Q5VYJ5 2156 aa7.37□□□□□ -1.23
USP53-207ENST00000510852 M0R1X1 148 aa7.37□□□□□ -1.23
USP53-207ENST00000510852 UQCRQO14949 82 aa7.37□□□□□ -1.23
USP53-207ENST00000510852 CGB3P0DN86 165 aa7.37□□□□□ -1.23
USP53-207ENST00000510852 CGB7P0DN87 165 aa7.37□□□□□ -1.23
USP53-207ENST00000510852 RRN3P1Q2M238 152 aa7.37□□□□□ -1.23
USP53-207ENST00000510852 C16orf95Q9H693 158 aa7.37□□□□□ -1.23
USP53-207ENST00000510852 NAP1L6A6NFF2 107 aa7.36□□□□□ -1.23
USP53-207ENST00000510852 SLC25A16P16260 332 aa7.36□□□□□ -1.23
USP53-207ENST00000510852 C17orf58Q2M2W7 97 aa7.36□□□□□ -1.23
USP53-207ENST00000510852 CALYQ9NYX4 217 aa7.36□□□□□ -1.23
USP53-207ENST00000510852 PDZD2O15018 2839 aa7.36□□□□□ -1.23
USP53-207ENST00000510852 A8MWV9 139 aa7.36□□□□□ -1.23
USP53-207ENST00000510852 CCL3L1P16619 93 aa7.36□□□□□ -1.23
USP53-207ENST00000510852 ZFP36P26651 326 aaKnown RBP7.36□□□□□ -1.23
USP53-207ENST00000510852 KLF17Q5JT82 389 aaPredicted RBP7.36□□□□□ -1.23
USP53-207ENST00000510852 KRTAP1-3Q8IUG1 177 aa7.36□□□□□ -1.23
USP53-207ENST00000510852 RNF185Q96GF1 192 aa7.36□□□□□ -1.23
USP53-207ENST00000510852 ZNF714Q96N38 554 aa7.36□□□□□ -1.23
USP53-207ENST00000510852 SPANXDQ9BXN6 97 aa7.36□□□□□ -1.23
USP53-207ENST00000510852 TRBV6-7A0A0A0MS04 114 aa7.35□□□□□ -1.23
USP53-207ENST00000510852 F8W1H4 67 aa7.35□□□□□ -1.23
USP53-207ENST00000510852 DUSP14O95147 198 aaKnown RBP7.35□□□□□ -1.23
USP53-207ENST00000510852 TCRAP04437 139 aa7.35□□□□□ -1.23
USP53-207ENST00000510852 KIAA2026Q5HYC2 2103 aa7.35□□□□□ -1.23
USP53-207ENST00000510852 LINC00337Q8N6G1 96 aa7.35□□□□□ -1.23
USP53-207ENST00000510852 DCANP1Q8TF63 244 aa7.35□□□□□ -1.23
USP53-207ENST00000510852 LINC00574Q9H8X3 128 aa7.35□□□□□ -1.23
USP53-207ENST00000510852 TRAV8-3A0A0A6YYJ7 113 aa7.35□□□□□ -1.23
USP53-207ENST00000510852 GRIFINA4D1Z8 144 aa7.35□□□□□ -1.23
USP53-207ENST00000510852 EGR2P11161 476 aaPredicted RBP7.35□□□□□ -1.23
USP53-207ENST00000510852 FCGR2CP31995 323 aa7.35□□□□□ -1.23
USP53-207ENST00000510852 FAM53AQ6NSI3 398 aaPredicted RBP7.35□□□□□ -1.23
USP53-207ENST00000510852 KTN1-AS1Q86SY8 53 aa7.35□□□□□ -1.23
USP53-207ENST00000510852 ODF3L1Q8IXM7 274 aa7.35□□□□□ -1.23
USP53-207ENST00000510852 NEXN-AS1Q8NBZ9 246 aa7.35□□□□□ -1.23
USP53-207ENST00000510852 C20orf78Q9BR46 151 aa7.35□□□□□ -1.23
USP53-207ENST00000510852 A0A096LNT2 108 aa7.34□□□□□ -1.23
USP53-207ENST00000510852 IGHV3-43A0A0B4J1X8 118 aa7.34□□□□□ -1.23
USP53-207ENST00000510852 LGALS9O00182 355 aa7.34□□□□□ -1.23
USP53-207ENST00000510852 IGHV3-43DP0DP04 118 aa7.34□□□□□ -1.23
USP53-207ENST00000510852 GATA2P23769 480 aaPredicted RBP7.34□□□□□ -1.23
USP53-207ENST00000510852 GTSCR1Q86UQ5 136 aa7.34□□□□□ -1.23
USP53-207ENST00000510852 PCP2Q8IVA1 136 aa7.34□□□□□ -1.23
USP53-207ENST00000510852 NDUFB6O95139 128 aa7.33□□□□□ -1.24
USP53-207ENST00000510852 INAFM2P0DMQ5 153 aa7.33□□□□□ -1.24
USP53-207ENST00000510852 ADIRFQ15847 76 aa7.33□□□□□ -1.24
USP53-207ENST00000510852 ZNF709Q8N972 641 aa7.33□□□□□ -1.24
USP53-207ENST00000510852 C18orf12Q96KH6 178 aa7.33□□□□□ -1.24
USP53-207ENST00000510852 KCNS1Q96KK3 526 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms