RNA–Protein interactions for RNA: ENST00000510576.6

CLMAT3-201, colorectal liver metastasis associated transcript 3, humanhuman

TSL 1 (best) BASIC

Gene CLMAT3, Length 1,973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLMAT3-201ENST00000510576 OR10AG1Q8NH19 301 aa12.66□□□□□ -0.38
CLMAT3-201ENST00000510576 PPP1R14DQ9NXH3 145 aa12.66□□□□□ -0.38
CLMAT3-201ENST00000510576 SIGLEC8Q9NYZ4 499 aa12.66□□□□□ -0.38
CLMAT3-201ENST00000510576 TIMM8BQ9Y5J9 83 aaPredicted RBP12.66□□□□□ -0.38
CLMAT3-201ENST00000510576 LOC389332A0A1B0GUA5 103 aa12.65□□□□□ -0.38
CLMAT3-201ENST00000510576 IGLV1-40P01703 118 aa12.65□□□□□ -0.38
CLMAT3-201ENST00000510576 CKS2P33552 79 aa12.65□□□□□ -0.38
CLMAT3-201ENST00000510576 HNRNPA3P51991 378 aaKnown RBP12.65□□□□□ -0.38
CLMAT3-201ENST00000510576 NPFFR1Q9GZQ6 430 aa12.65□□□□□ -0.38
CLMAT3-201ENST00000510576 ZFHX3Q15911 3703 aa12.65□□□□□ -0.38
CLMAT3-201ENST00000510576 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.65□□□□□ -0.38
CLMAT3-201ENST00000510576 C20orf173Q96LM9 149 aa12.65□□□□□ -0.38
CLMAT3-201ENST00000510576 CELSR1Q9NYQ6 3014 aa12.64□□□□□ -0.39
CLMAT3-201ENST00000510576 IGKV3D-20A0A0C4DH25 116 aa12.64□□□□□ -0.39
CLMAT3-201ENST00000510576 IGLL1P15814 213 aa12.64□□□□□ -0.39
CLMAT3-201ENST00000510576 MSRB1Q9NZV6 116 aa12.64□□□□□ -0.39
CLMAT3-201ENST00000510576 CFHR3Q02985 330 aa12.63□□□□□ -0.39
CLMAT3-201ENST00000510576 LCNL1Q6ZST4 164 aa12.63□□□□□ -0.39
CLMAT3-201ENST00000510576 C11orf21Q9P2W6 132 aa12.63□□□□□ -0.39
CLMAT3-201ENST00000510576 SPG11Q96JI7 2443 aa12.63□□□□□ -0.39
CLMAT3-201ENST00000510576 SMKR1H3BMG3 65 aa12.63□□□□□ -0.39
CLMAT3-201ENST00000510576 RPLP1P05386 114 aaKnown RBP12.63□□□□□ -0.39
CLMAT3-201ENST00000510576 BATFQ16520 125 aa12.63□□□□□ -0.39
CLMAT3-201ENST00000510576 DEFB112Q30KQ8 113 aa12.63□□□□□ -0.39
CLMAT3-201ENST00000510576 GPHB5Q86YW7 130 aa12.63□□□□□ -0.39
CLMAT3-201ENST00000510576 ZNF580Q9UK33 172 aa12.63□□□□□ -0.39
CLMAT3-201ENST00000510576 LENEPQ9Y5L5 61 aa12.63□□□□□ -0.39
CLMAT3-201ENST00000510576 H0Y8G0 127 aa12.62□□□□□ -0.39
CLMAT3-201ENST00000510576 J3QLI3 93 aa12.62□□□□□ -0.39
CLMAT3-201ENST00000510576 OVOL1O14753 267 aa12.62□□□□□ -0.39
CLMAT3-201ENST00000510576 NCR2O95944 276 aa12.62□□□□□ -0.39
CLMAT3-201ENST00000510576 NPYP01303 97 aa12.62□□□□□ -0.39
CLMAT3-201ENST00000510576 FAM106AQ4KMX7 169 aa12.62□□□□□ -0.39
CLMAT3-201ENST00000510576 OR10J6PQ8NGY7 276 aa12.62□□□□□ -0.39
CLMAT3-201ENST00000510576 RNF185Q96GF1 192 aa12.62□□□□□ -0.39
CLMAT3-201ENST00000510576 ZNF747Q9BV97 191 aa12.62□□□□□ -0.39
CLMAT3-201ENST00000510576 CRYBG3Q68DQ2 2970 aa12.62□□□□□ -0.39
CLMAT3-201ENST00000510576 A0A096LNT2 108 aa12.61□□□□□ -0.39
CLMAT3-201ENST00000510576 IGHV7-4-1A0A0J9YVY3 117 aa12.61□□□□□ -0.39
CLMAT3-201ENST00000510576 SOCS3O14543 225 aa12.61□□□□□ -0.39
CLMAT3-201ENST00000510576 IGHV4-59P01825 116 aa12.61□□□□□ -0.39
CLMAT3-201ENST00000510576 PPBPP02775 128 aa12.61□□□□□ -0.39
CLMAT3-201ENST00000510576 FOXE3Q13461 319 aa12.61□□□□□ -0.39
CLMAT3-201ENST00000510576 LINC00477Q96M19 166 aa12.61□□□□□ -0.39
CLMAT3-201ENST00000510576 ST20Q9HBF5 79 aa12.61□□□□□ -0.39
CLMAT3-201ENST00000510576 FASNP49327 2511 aaKnown RBP12.61□□□□□ -0.39
CLMAT3-201ENST00000510576 HSBP1L1C9JCN9 74 aa12.61□□□□□ -0.39
CLMAT3-201ENST00000510576 RPL11P62913 178 aaKnown RBP12.61□□□□□ -0.39
CLMAT3-201ENST00000510576 LOXL1Q08397 574 aaPredicted RBP12.61□□□□□ -0.39
CLMAT3-201ENST00000510576 TSPOP30536 169 aa12.6□□□□□ -0.39
CLMAT3-201ENST00000510576 LINC01545Q5VT33 79 aa12.6□□□□□ -0.39
CLMAT3-201ENST00000510576 USP9YO00507 2555 aaPredicted RBP12.6□□□□□ -0.39
CLMAT3-201ENST00000510576 A0A096LNJ9 63 aa12.6□□□□□ -0.39
CLMAT3-201ENST00000510576 J3QKU1 62 aa12.6□□□□□ -0.39
CLMAT3-201ENST00000510576 TCAPO15273 167 aa12.6□□□□□ -0.39
CLMAT3-201ENST00000510576 TCF21O43680 179 aa12.6□□□□□ -0.39
CLMAT3-201ENST00000510576 TGFAP01135 160 aa12.6□□□□□ -0.39
CLMAT3-201ENST00000510576 TMEM95Q3KNT9 176 aa12.6□□□□□ -0.39
CLMAT3-201ENST00000510576 PRSS57Q6UWY2 283 aa12.6□□□□□ -0.39
CLMAT3-201ENST00000510576 RHPN1-AS1Q9BWJ2 59 aa12.6□□□□□ -0.39
CLMAT3-201ENST00000510576 MAP1LC3AQ9H492 121 aa12.6□□□□□ -0.39
CLMAT3-201ENST00000510576 DAZ1Q9NQZ3 744 aaKnown RBP12.6□□□□□ -0.39
CLMAT3-201ENST00000510576 PEF1Q9UBV8 284 aaKnown RBP12.6□□□□□ -0.39
CLMAT3-201ENST00000510576 LAMTOR2Q9Y2Q5 125 aa12.6□□□□□ -0.39
CLMAT3-201ENST00000510576 hDV102S1A0JD36 115 aa12.59□□□□□ -0.39
CLMAT3-201ENST00000510576 A1L4Q6 167 aa12.59□□□□□ -0.39
CLMAT3-201ENST00000510576 TM4SF20Q53R12 229 aa12.59□□□□□ -0.39
CLMAT3-201ENST00000510576 MRPS16Q9Y3D3 137 aaKnown RBP12.59□□□□□ -0.39
CLMAT3-201ENST00000510576 HBDP02042 147 aa12.58□□□□□ -0.4
CLMAT3-201ENST00000510576 PRR9Q5T870 116 aa12.58□□□□□ -0.4
CLMAT3-201ENST00000510576 SMIM15Q7Z3B0 74 aa12.58□□□□□ -0.4
CLMAT3-201ENST00000510576 MCRIP2Q9BUT9 160 aaKnown RBP12.58□□□□□ -0.4
CLMAT3-201ENST00000510576 COL5A1-AS1Q5SY13 56 aa12.58□□□□□ -0.4
CLMAT3-201ENST00000510576 CELSR2Q9HCU4 2923 aa12.57□□□□□ -0.4
CLMAT3-201ENST00000510576 K7EMT4 169 aa12.57□□□□□ -0.4
CLMAT3-201ENST00000510576 PSMB8P28062 276 aa12.57□□□□□ -0.4
CLMAT3-201ENST00000510576 CACNG7P62955 275 aa12.57□□□□□ -0.4
CLMAT3-201ENST00000510576 Q6ZQT7 251 aa12.57□□□□□ -0.4
CLMAT3-201ENST00000510576 MAPK1IP1LQ8NDC0 245 aa12.57□□□□□ -0.4
CLMAT3-201ENST00000510576 OR8A1Q8NGG7 326 aa12.57□□□□□ -0.4
CLMAT3-201ENST00000510576 SMPXQ9UHP9 88 aa12.57□□□□□ -0.4
CLMAT3-201ENST00000510576 IGKV3-7A0A075B6H7 116 aa12.56□□□□□ -0.4
CLMAT3-201ENST00000510576 J3KRW8 73 aa12.56□□□□□ -0.4
CLMAT3-201ENST00000510576 SNAI2O43623 268 aa12.56□□□□□ -0.4
CLMAT3-201ENST00000510576 ZFAND2AQ8N6M9 145 aa12.56□□□□□ -0.4
CLMAT3-201ENST00000510576 PMCHL2Q9BQD1 86 aa12.56□□□□□ -0.4
CLMAT3-201ENST00000510576 ANKRD17O75179 2603 aaKnown RBP12.56□□□□□ -0.4
CLMAT3-201ENST00000510576 TRAV21A0A0B4J279 112 aa12.56□□□□□ -0.4
CLMAT3-201ENST00000510576 TMEM89A2RUT3 159 aa12.56□□□□□ -0.4
CLMAT3-201ENST00000510576 TNFRSF6BO95407 300 aa12.56□□□□□ -0.4
CLMAT3-201ENST00000510576 SPANXN1Q5VSR9 72 aa12.56□□□□□ -0.4
CLMAT3-201ENST00000510576 MS4A6AQ9H2W1 248 aa12.56□□□□□ -0.4
CLMAT3-201ENST00000510576 IGHV4-4A0A075B6R2 117 aa12.55□□□□□ -0.4
CLMAT3-201ENST00000510576 RNF223E7ERA6 249 aa12.55□□□□□ -0.4
CLMAT3-201ENST00000510576 H3BVH4 76 aa12.55□□□□□ -0.4
CLMAT3-201ENST00000510576 NXT2Q9NPJ8 142 aaKnown RBP12.55□□□□□ -0.4
CLMAT3-201ENST00000510576 GAS8-AS1O95177 125 aa12.54□□□□□ -0.4
CLMAT3-201ENST00000510576 EVI2AP22794 236 aa12.54□□□□□ -0.4
CLMAT3-201ENST00000510576 FXYD7P58549 80 aa12.54□□□□□ -0.4
CLMAT3-201ENST00000510576 DEFB1P60022 68 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms