RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 K7EN84 100 aa8.41□□□□□ -1.06
NEK1-206ENST00000510533 GAGE7O76087 117 aa8.41□□□□□ -1.06
NEK1-206ENST00000510533 GAGE12FP0CL80 117 aa8.41□□□□□ -1.06
NEK1-206ENST00000510533 GAGE12GP0CL81 117 aa8.41□□□□□ -1.06
NEK1-206ENST00000510533 GAGE12IP0CL82 117 aa8.41□□□□□ -1.06
NEK1-206ENST00000510533 POU2AF1Q16633 256 aa8.41□□□□□ -1.06
NEK1-206ENST00000510533 TCF20Q9UGU0 1960 aaKnown RBP8.41□□□□□ -1.06
NEK1-206ENST00000510533 ZSWIM8A7E2V4 1837 aa8.41□□□□□ -1.06
NEK1-206ENST00000510533 GAGE6Q13070 117 aa8.4□□□□□ -1.06
NEK1-206ENST00000510533 DIAPH2-AS1Q14236 149 aa8.4□□□□□ -1.06
NEK1-206ENST00000510533 DOCK11Q5JSL3 2073 aa8.4□□□□□ -1.06
NEK1-206ENST00000510533 CADP27708 2225 aa8.4□□□□□ -1.06
NEK1-206ENST00000510533 YLPM1P49750 1951 aaKnown RBP8.4□□□□□ -1.06
NEK1-206ENST00000510533 K7ERJ3 54 aa8.4□□□□□ -1.06
NEK1-206ENST00000510533 IGFL3Q6UXB1 125 aa8.4□□□□□ -1.06
NEK1-206ENST00000510533 NXPH4O95158 308 aa8.4□□□□□ -1.06
NEK1-206ENST00000510533 SRSF2Q01130 221 aaKnown RBP8.4□□□□□ -1.06
NEK1-206ENST00000510533 DKK2Q9UBU2 259 aa8.4□□□□□ -1.06
NEK1-206ENST00000510533 LY6G6EA0A0G2JKS1 128 aa8.4□□□□□ -1.07
NEK1-206ENST00000510533 LYPD6BQ8NI32 183 aa8.4□□□□□ -1.07
NEK1-206ENST00000510533 CARD19Q96LW7 228 aa8.4□□□□□ -1.07
NEK1-206ENST00000510533 U3KQA8 63 aa8.4□□□□□ -1.07
NEK1-206ENST00000510533 ACACAQ13085 2346 aa8.4□□□□□ -1.07
NEK1-206ENST00000510533 H3BMG7 143 aa8.39□□□□□ -1.07
NEK1-206ENST00000510533 IFITM1P13164 125 aa8.39□□□□□ -1.07
NEK1-206ENST00000510533 K7ENP7 123 aa8.39□□□□□ -1.07
NEK1-206ENST00000510533 HLA-DMBP28068 263 aa8.39□□□□□ -1.07
NEK1-206ENST00000510533 ZNF491Q8N8L2 437 aa8.39□□□□□ -1.07
NEK1-206ENST00000510533 NKAPP1Q8N9T2 125 aa8.39□□□□□ -1.07
NEK1-206ENST00000510533 TMEM126AQ9H061 195 aa8.39□□□□□ -1.07
NEK1-206ENST00000510533 ARFGEF3Q5TH69 2177 aa8.39□□□□□ -1.07
NEK1-206ENST00000510533 GAGE12HA6NDE8 117 aa8.39□□□□□ -1.07
NEK1-206ENST00000510533 HERVK_113P63121 156 aa8.39□□□□□ -1.07
NEK1-206ENST00000510533 HAMPP81172 84 aa8.39□□□□□ -1.07
NEK1-206ENST00000510533 WIPF2Q8TF74 440 aaPredicted RBP8.39□□□□□ -1.07
NEK1-206ENST00000510533 TRAV13-2A0A0B4J235 113 aa8.39□□□□□ -1.07
NEK1-206ENST00000510533 IGHV7-4-1A0A0J9YVY3 117 aa8.39□□□□□ -1.07
NEK1-206ENST00000510533 KLF5Q13887 457 aaPredicted RBP8.39□□□□□ -1.07
NEK1-206ENST00000510533 DOCK10Q96BY6 2186 aa8.38□□□□□ -1.07
NEK1-206ENST00000510533 CRLF1O75462 422 aa8.38□□□□□ -1.07
NEK1-206ENST00000510533 SCRT2Q9NQ03 307 aa8.38□□□□□ -1.07
NEK1-206ENST00000510533 C12orf74Q32Q52 190 aa8.38□□□□□ -1.07
NEK1-206ENST00000510533 SUMO4Q6EEV6 95 aa8.38□□□□□ -1.07
NEK1-206ENST00000510533 ZNF747Q9BV97 191 aa8.38□□□□□ -1.07
NEK1-206ENST00000510533 TRPM7Q96QT4 1865 aa8.38□□□□□ -1.07
NEK1-206ENST00000510533 NCOR1O75376 2440 aa8.38□□□□□ -1.07
NEK1-206ENST00000510533 MAPK1IP1LQ8NDC0 245 aa8.38□□□□□ -1.07
NEK1-206ENST00000510533 PKDREJQ9NTG1 2253 aa8.38□□□□□ -1.07
NEK1-206ENST00000510533 WNK2Q9Y3S1 2297 aa8.37□□□□□ -1.07
NEK1-206ENST00000510533 FAM120AOSQ5T036 256 aa8.37□□□□□ -1.07
NEK1-206ENST00000510533 SP5Q6BEB4 398 aaPredicted RBP8.37□□□□□ -1.07
NEK1-206ENST00000510533 KAAG1Q9UBP8 84 aa8.37□□□□□ -1.07
NEK1-206ENST00000510533 AMTNQ6UX39 209 aa8.37□□□□□ -1.07
NEK1-206ENST00000510533 C17orf77Q96MU5 243 aa8.37□□□□□ -1.07
NEK1-206ENST00000510533 ZNF493Q6ZR52 646 aa8.37□□□□□ -1.07
NEK1-206ENST00000510533 BOD1L2Q8IYS8 172 aa8.37□□□□□ -1.07
NEK1-206ENST00000510533 COL4A6Q14031 1691 aa8.37□□□□□ -1.07
NEK1-206ENST00000510533 TRAV25A0A0B4J276 109 aa8.36□□□□□ -1.07
NEK1-206ENST00000510533 IGLC7A0M8Q6 106 aa8.36□□□□□ -1.07
NEK1-206ENST00000510533 PRSS29PA6NIE9 313 aa8.36□□□□□ -1.07
NEK1-206ENST00000510533 DYNAPQ8N1N2 210 aa8.36□□□□□ -1.07
NEK1-206ENST00000510533 C8orf31Q8N9H6 132 aa8.36□□□□□ -1.07
NEK1-206ENST00000510533 Q8NFD4 153 aa8.36□□□□□ -1.07
NEK1-206ENST00000510533 MRPL53Q96EL3 112 aaKnown RBP8.36□□□□□ -1.07
NEK1-206ENST00000510533 EGR2P11161 476 aaPredicted RBP8.36□□□□□ -1.07
NEK1-206ENST00000510533 DSCR8Q96T75 97 aa8.36□□□□□ -1.07
NEK1-206ENST00000510533 COL6A6A6NMZ7 2263 aa8.36□□□□□ -1.07
NEK1-206ENST00000510533 ATP6V0BQ99437 205 aa8.36□□□□□ -1.07
NEK1-206ENST00000510533 K7EMI3 77 aa8.35□□□□□ -1.07
NEK1-206ENST00000510533 J3QLI3 93 aa8.35□□□□□ -1.07
NEK1-206ENST00000510533 RNASE13Q5GAN3 156 aaKnown RBP8.35□□□□□ -1.07
NEK1-206ENST00000510533 C3orf56Q8N813 242 aa8.35□□□□□ -1.07
NEK1-206ENST00000510533 FAM215AQ9Y5M1 114 aa8.35□□□□□ -1.07
NEK1-206ENST00000510533 THSD7BQ9C0I4 1608 aa8.35□□□□□ -1.07
NEK1-206ENST00000510533 H3BUA1 57 aa8.35□□□□□ -1.07
NEK1-206ENST00000510533 RHOHQ15669 191 aa8.35□□□□□ -1.07
NEK1-206ENST00000510533 CFHR4Q92496 578 aa8.35□□□□□ -1.07
NEK1-206ENST00000510533 AGPAT4-IT1Q9H0P7 198 aa8.35□□□□□ -1.07
NEK1-206ENST00000510533 TRACP01848 142 aa8.35□□□□□ -1.07
NEK1-206ENST00000510533 NTN5Q8WTR8 489 aaPredicted RBP8.35□□□□□ -1.07
NEK1-206ENST00000510533 RBAKDNA6NC62 111 aa8.35□□□□□ -1.07
NEK1-206ENST00000510533 ELANEP08246 267 aa8.35□□□□□ -1.07
NEK1-206ENST00000510533 CFC1BP0CG36 223 aa8.35□□□□□ -1.07
NEK1-206ENST00000510533 CFC1P0CG37 223 aa8.35□□□□□ -1.07
NEK1-206ENST00000510533 HOXD3P31249 432 aaPredicted RBP8.35□□□□□ -1.07
NEK1-206ENST00000510533 CR1LQ2VPA4 569 aa8.35□□□□□ -1.07
NEK1-206ENST00000510533 FNDC1Q4ZHG4 1894 aaPredicted RBP8.34□□□□□ -1.07
NEK1-206ENST00000510533 APOC4P55056 127 aa8.34□□□□□ -1.07
NEK1-206ENST00000510533 ANKRD29Q8N6D5 301 aa8.34□□□□□ -1.07
NEK1-206ENST00000510533 Q96MF0 132 aa8.34□□□□□ -1.07
NEK1-206ENST00000510533 USF3Q68DE3 2245 aa8.34□□□□□ -1.07
NEK1-206ENST00000510533 PLXNA4Q9HCM2 1894 aa8.34□□□□□ -1.07
NEK1-206ENST00000510533 KIR2DL5BA0A0G2JN68 375 aa8.34□□□□□ -1.07
NEK1-206ENST00000510533 KIR2DL5BA0A0G2JPC4 375 aa8.34□□□□□ -1.07
NEK1-206ENST00000510533 GNRH2O43555 120 aa8.34□□□□□ -1.07
NEK1-206ENST00000510533 KIR2DL5AQ8N109 375 aa8.34□□□□□ -1.07
NEK1-206ENST00000510533 FOXE3Q13461 319 aa8.34□□□□□ -1.07
NEK1-206ENST00000510533 FOXI2Q6ZQN5 318 aa8.34□□□□□ -1.07
NEK1-206ENST00000510533 DOCK8Q8NF50 2099 aa8.34□□□□□ -1.07
NEK1-206ENST00000510533 DOCK9Q9BZ29 2069 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms