RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 K7EP34 96 aa11.71□□□□□ -0.53
USP38-202ENST00000510377 EFNA4P52798 201 aa11.71□□□□□ -0.53
USP38-202ENST00000510377 CD300EQ496F6 205 aaPredicted RBP11.71□□□□□ -0.53
USP38-202ENST00000510377 RNASE4P34096 147 aaKnown RBP11.71□□□□□ -0.53
USP38-202ENST00000510377 TEX22C9J3V5 150 aa11.71□□□□□ -0.54
USP38-202ENST00000510377 THBDP07204 575 aa11.71□□□□□ -0.54
USP38-202ENST00000510377 LAGE3Q14657 143 aa11.71□□□□□ -0.54
USP38-202ENST00000510377 ETDBQ3ZM63 59 aa11.71□□□□□ -0.54
USP38-202ENST00000510377 MRPL35Q9NZE8 188 aaKnown RBP11.71□□□□□ -0.54
USP38-202ENST00000510377 A0A1W2PPM0 123 aa11.7□□□□□ -0.54
USP38-202ENST00000510377 SRSF1Q07955 248 aaKnown RBP eCLIP11.7□□□□□ -0.54
USP38-202ENST00000510377 IGFL2Q6UWQ7 119 aa11.7□□□□□ -0.54
USP38-202ENST00000510377 BEX4Q9NWD9 120 aaPredicted RBP11.7□□□□□ -0.54
USP38-202ENST00000510377 DSPP15924 2871 aaKnown RBP11.7□□□□□ -0.54
USP38-202ENST00000510377 C2CD3Q4AC94 2353 aa11.7□□□□□ -0.54
USP38-202ENST00000510377 TMEM238LA0A1B0GVL6 79 aa11.7□□□□□ -0.54
USP38-202ENST00000510377 A6NJY4 79 aa11.7□□□□□ -0.54
USP38-202ENST00000510377 SORL1Q92673 2214 aa11.7□□□□□ -0.54
USP38-202ENST00000510377 CRYGCP07315 174 aa11.7□□□□□ -0.54
USP38-202ENST00000510377 ATP5J2P56134 94 aa11.7□□□□□ -0.54
USP38-202ENST00000510377 PDE6HQ13956 83 aa11.7□□□□□ -0.54
USP38-202ENST00000510377 RAB9AP51151 201 aa11.69□□□□□ -0.54
USP38-202ENST00000510377 C14orf178Q8N769 122 aaPredicted RBP11.69□□□□□ -0.54
USP38-202ENST00000510377 SIGMAR1Q99720 223 aa11.69□□□□□ -0.54
USP38-202ENST00000510377 ZNF815PA8K554 130 aa11.69□□□□□ -0.54
USP38-202ENST00000510377 G3V318 75 aa11.69□□□□□ -0.54
USP38-202ENST00000510377 CHTOPQ9Y3Y2 248 aaKnown RBP11.69□□□□□ -0.54
USP38-202ENST00000510377 SPTBN5Q9NRC6 3674 aaKnown RBP11.69□□□□□ -0.54
USP38-202ENST00000510377 PRSS2P07478 247 aa11.68□□□□□ -0.54
USP38-202ENST00000510377 ASIPP42127 132 aa11.68□□□□□ -0.54
USP38-202ENST00000510377 DYNAPQ8N1N2 210 aa11.68□□□□□ -0.54
USP38-202ENST00000510377 NPIPB6E9PJ23 425 aa11.68□□□□□ -0.54
USP38-202ENST00000510377 C3orf36Q3SXR2 165 aa11.68□□□□□ -0.54
USP38-202ENST00000510377 GAGE13Q4V321 117 aa11.68□□□□□ -0.54
USP38-202ENST00000510377 ZNF562Q6V9R5 426 aa11.68□□□□□ -0.54
USP38-202ENST00000510377 DTX2Q86UW9 622 aa11.68□□□□□ -0.54
USP38-202ENST00000510377 RNF5Q99942 180 aa11.68□□□□□ -0.54
USP38-202ENST00000510377 ZNF256Q9Y2P7 627 aaPredicted RBP11.68□□□□□ -0.54
USP38-202ENST00000510377 GRNP28799 593 aaKnown RBP11.68□□□□□ -0.54
USP38-202ENST00000510377 MYCNOSP40205 109 aa11.68□□□□□ -0.54
USP38-202ENST00000510377 SLC50A1Q9BRV3 221 aa11.68□□□□□ -0.54
USP38-202ENST00000510377 FXYD2P54710 66 aa11.67□□□□□ -0.54
USP38-202ENST00000510377 LYRM7Q5U5X0 104 aa11.67□□□□□ -0.54
USP38-202ENST00000510377 HIVEP3Q5T1R4 2406 aa11.67□□□□□ -0.54
USP38-202ENST00000510377 H3BMG7 143 aa11.67□□□□□ -0.54
USP38-202ENST00000510377 CLEC2AQ6UVW9 174 aa11.67□□□□□ -0.54
USP38-202ENST00000510377 INS-IGF2F8WCM5 200 aa11.67□□□□□ -0.54
USP38-202ENST00000510377 KAAG1Q9UBP8 84 aa11.67□□□□□ -0.54
USP38-202ENST00000510377 PRB1P04280 392 aa11.66□□□□□ -0.54
USP38-202ENST00000510377 TSSC4Q9Y5U2 329 aaPredicted RBP11.66□□□□□ -0.54
USP38-202ENST00000510377 USP9YO00507 2555 aaPredicted RBP11.66□□□□□ -0.54
USP38-202ENST00000510377 TEX48A0A1B0GUV7 120 aa11.66□□□□□ -0.54
USP38-202ENST00000510377 LINC00574Q9H8X3 128 aa11.66□□□□□ -0.54
USP38-202ENST00000510377 FLNBO75369 2602 aaKnown RBP11.66□□□□□ -0.54
USP38-202ENST00000510377 IGHV3-64A0A075B6Q5 118 aa11.66□□□□□ -0.54
USP38-202ENST00000510377 SHISA9B4DS77 424 aa11.66□□□□□ -0.54
USP38-202ENST00000510377 CRIP1P50238 77 aa11.66□□□□□ -0.54
USP38-202ENST00000510377 NEGR1Q7Z3B1 354 aa11.66□□□□□ -0.54
USP38-202ENST00000510377 PRAC2D3DTV9 90 aa11.65□□□□□ -0.54
USP38-202ENST00000510377 HOXA3O43365 443 aaPredicted RBP11.65□□□□□ -0.54
USP38-202ENST00000510377 IGLV1-47P01700 117 aa11.65□□□□□ -0.54
USP38-202ENST00000510377 ZNF56Q15929 161 aa11.65□□□□□ -0.54
USP38-202ENST00000510377 JMJD1CQ15652 2540 aa11.65□□□□□ -0.54
USP38-202ENST00000510377 FAM159AQ6UWV7 190 aa11.65□□□□□ -0.55
USP38-202ENST00000510377 IGFL3Q6UXB1 125 aa11.65□□□□□ -0.55
USP38-202ENST00000510377 CSTL1Q9H114 145 aa11.65□□□□□ -0.55
USP38-202ENST00000510377 C7orf69Q9H7B7 122 aa11.65□□□□□ -0.55
USP38-202ENST00000510377 KIR2DL4Q99706 377 aa11.64□□□□□ -0.55
USP38-202ENST00000510377 MYO9AB2RTY4 2548 aa11.64□□□□□ -0.55
USP38-202ENST00000510377 ATP6V0E1O15342 81 aa11.64□□□□□ -0.55
USP38-202ENST00000510377 LGALS3P17931 250 aaKnown RBP11.64□□□□□ -0.55
USP38-202ENST00000510377 ZNF80P51504 273 aaPredicted RBP11.64□□□□□ -0.55
USP38-202ENST00000510377 CFHR4Q92496 578 aa11.64□□□□□ -0.55
USP38-202ENST00000510377 PGPEP1Q9NXJ5 209 aa11.64□□□□□ -0.55
USP38-202ENST00000510377 SMPXQ9UHP9 88 aa11.64□□□□□ -0.55
USP38-202ENST00000510377 TRBV25-1A0A075B6N4 114 aa11.63□□□□□ -0.55
USP38-202ENST00000510377 PRTN3P24158 256 aa11.63□□□□□ -0.55
USP38-202ENST00000510377 SH2D6Q7Z4S9 175 aa11.63□□□□□ -0.55
USP38-202ENST00000510377 BOD1L2Q8IYS8 172 aa11.63□□□□□ -0.55
USP38-202ENST00000510377 CRXO43186 299 aaPredicted RBP11.63□□□□□ -0.55
USP38-202ENST00000510377 FOXE3Q13461 319 aa11.63□□□□□ -0.55
USP38-202ENST00000510377 A0A1B0GV72 72 aa11.62□□□□□ -0.55
USP38-202ENST00000510377 IGLV2-11P01706 119 aa11.62□□□□□ -0.55
USP38-202ENST00000510377 C8orf31Q8N9H6 132 aa11.62□□□□□ -0.55
USP38-202ENST00000510377 PSMG4Q5JS54 123 aa11.62□□□□□ -0.55
USP38-202ENST00000510377 AGPAT4-IT1Q9H0P7 198 aa11.62□□□□□ -0.55
USP38-202ENST00000510377 PAX8Q06710 450 aa11.62□□□□□ -0.55
USP38-202ENST00000510377 ORMDL2Q53FV1 153 aa11.62□□□□□ -0.55
USP38-202ENST00000510377 C2orf91Q6ZV80 131 aa11.62□□□□□ -0.55
USP38-202ENST00000510377 Q8N8P6 123 aa11.62□□□□□ -0.55
USP38-202ENST00000510377 SRSF8Q9BRL6 282 aaKnown RBP11.62□□□□□ -0.55
USP38-202ENST00000510377 TMEM238C9JI98 176 aa11.62□□□□□ -0.55
USP38-202ENST00000510377 H7C1H1 209 aa11.61□□□□□ -0.55
USP38-202ENST00000510377 BRD3OSQ6XYD6 125 aa11.61□□□□□ -0.55
USP38-202ENST00000510377 PKD1L2Q7Z442 2459 aa11.61□□□□□ -0.55
USP38-202ENST00000510377 CD7P09564 240 aa11.61□□□□□ -0.55
USP38-202ENST00000510377 NACAE9PAV3 2078 aa11.61□□□□□ -0.55
USP38-202ENST00000510377 TRAV21A0A0B4J279 112 aa11.6□□□□□ -0.55
USP38-202ENST00000510377 TNRC6BQ9UPQ9 1833 aaKnown RBP11.6□□□□□ -0.55
USP38-202ENST00000510377 SAA4P35542 130 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms