RNA–Protein interactions for RNA: ENST00000510331.1

LSM6-206, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-206ENST00000510331 TNFSF18Q9UNG2 199 aa12.97□□□□□ -0.33
LSM6-206ENST00000510331 KLF12Q9Y4X4 402 aa12.97□□□□□ -0.33
LSM6-206ENST00000510331 TRGV1A0A0A0MS02 117 aa12.96□□□□□ -0.33
LSM6-206ENST00000510331 A0A0J9YY99 117 aa12.96□□□□□ -0.33
LSM6-206ENST00000510331 RPL7L1Q6DKI1 246 aaKnown RBP12.96□□□□□ -0.33
LSM6-206ENST00000510331 GOLT1AQ6ZVE7 132 aa12.96□□□□□ -0.33
LSM6-206ENST00000510331 CMTM2Q8TAZ6 248 aa12.96□□□□□ -0.33
LSM6-206ENST00000510331 RXFP4Q8TDU9 374 aa12.96□□□□□ -0.33
LSM6-206ENST00000510331 ATG101Q9BSB4 218 aa12.96□□□□□ -0.33
LSM6-206ENST00000510331 MUC4Q99102 2169 aa12.96□□□□□ -0.34
LSM6-206ENST00000510331 PGPA6NDG6 321 aa12.95□□□□□ -0.34
LSM6-206ENST00000510331 STAG3L2P0CL84 134 aa12.95□□□□□ -0.34
LSM6-206ENST00000510331 STAG3L3P0CL85 134 aa12.95□□□□□ -0.34
LSM6-206ENST00000510331 LGALS9BQ3B8N2 356 aa12.95□□□□□ -0.34
LSM6-206ENST00000510331 MUC21Q5SSG8 566 aa12.95□□□□□ -0.34
LSM6-206ENST00000510331 IBA57Q5T440 356 aaKnown RBP12.95□□□□□ -0.34
LSM6-206ENST00000510331 Q6ZR54 194 aa12.95□□□□□ -0.34
LSM6-206ENST00000510331 SSX7Q7RTT5 188 aa12.95□□□□□ -0.34
LSM6-206ENST00000510331 INO80EQ8NBZ0 244 aaPredicted RBP12.95□□□□□ -0.34
LSM6-206ENST00000510331 RAB24Q969Q5 203 aa12.95□□□□□ -0.34
LSM6-206ENST00000510331 ARPC5LQ9BPX5 153 aa12.95□□□□□ -0.34
LSM6-206ENST00000510331 PKHD1P08F94 4074 aa12.94□□□□□ -0.34
LSM6-206ENST00000510331 TRGV2A0A075B6R0 118 aa12.94□□□□□ -0.34
LSM6-206ENST00000510331 TRAV8-1A0A0A6YYK1 113 aa12.94□□□□□ -0.34
LSM6-206ENST00000510331 RTL8CO15255 209 aa12.94□□□□□ -0.34
LSM6-206ENST00000510331 FAM74A1Q5RGS3 127 aa12.94□□□□□ -0.34
LSM6-206ENST00000510331 GNPNAT1Q96EK6 184 aaPredicted RBP12.94□□□□□ -0.34
LSM6-206ENST00000510331 MRPL16Q9NX20 251 aaKnown RBP12.94□□□□□ -0.34
LSM6-206ENST00000510331 F6UZH7 168 aa12.93□□□□□ -0.34
LSM6-206ENST00000510331 SPINK4O60575 86 aa12.93□□□□□ -0.34
LSM6-206ENST00000510331 GCHFRP30047 84 aa12.93□□□□□ -0.34
LSM6-206ENST00000510331 Q6AWC8 147 aa12.93□□□□□ -0.34
LSM6-206ENST00000510331 TMED6Q8WW62 240 aa12.93□□□□□ -0.34
LSM6-206ENST00000510331 LINC00588Q9Y4M8 146 aa12.93□□□□□ -0.34
LSM6-206ENST00000510331 FAM3BP58499 235 aaPredicted RBP12.92□□□□□ -0.34
LSM6-206ENST00000510331 ZNF415Q09FC8 603 aa12.92□□□□□ -0.34
LSM6-206ENST00000510331 LINC00336Q6ZUF6 198 aa12.92□□□□□ -0.34
LSM6-206ENST00000510331 LENEPQ9Y5L5 61 aa12.92□□□□□ -0.34
LSM6-206ENST00000510331 BORCS7-ASMTA0A0B4J1R7 106 aa12.91□□□□□ -0.34
LSM6-206ENST00000510331 SMLR1H3BR10 107 aa12.91□□□□□ -0.34
LSM6-206ENST00000510331 MBP02144 154 aa12.91□□□□□ -0.34
LSM6-206ENST00000510331 SERF2P84101 59 aa12.91□□□□□ -0.34
LSM6-206ENST00000510331 ZNRF2Q8NHG8 242 aa12.91□□□□□ -0.34
LSM6-206ENST00000510331 TVP23CQ96ET8 276 aa12.91□□□□□ -0.34
LSM6-206ENST00000510331 C18orf15Q96N68 181 aa12.91□□□□□ -0.34
LSM6-206ENST00000510331 NAGKQ9UJ70 344 aa12.91□□□□□ -0.34
LSM6-206ENST00000510331 HERC2O95714 4834 aa12.91□□□□□ -0.34
LSM6-206ENST00000510331 GGTLC3B5MD39 225 aa12.9□□□□□ -0.34
LSM6-206ENST00000510331 ARPC5O15511 151 aa12.9□□□□□ -0.34
LSM6-206ENST00000510331 IGHV3-53P01767 116 aa12.9□□□□□ -0.34
LSM6-206ENST00000510331 CCL18P55774 89 aa12.9□□□□□ -0.34
LSM6-206ENST00000510331 ZNF726P1Q15940 193 aa12.9□□□□□ -0.34
LSM6-206ENST00000510331 TMEM183BQ1AE95 376 aa12.9□□□□□ -0.34
LSM6-206ENST00000510331 TMEM183AQ8IXX5 376 aa12.9□□□□□ -0.34
LSM6-206ENST00000510331 SUN5Q8TC36 379 aa12.9□□□□□ -0.34
LSM6-206ENST00000510331 ST6GAL2Q96JF0 529 aa12.9□□□□□ -0.34
LSM6-206ENST00000510331 SGK494Q96LW2 274 aa12.9□□□□□ -0.34
LSM6-206ENST00000510331 MDFICQ9P1T7 246 aa12.9□□□□□ -0.34
LSM6-206ENST00000510331 KIAA1109Q2LD37 5005 aa12.89□□□□□ -0.35
LSM6-206ENST00000510331 IQCF2Q8IXL9 164 aa12.89□□□□□ -0.35
LSM6-206ENST00000510331 C5orf17Q8NAS9 161 aa12.89□□□□□ -0.35
LSM6-206ENST00000510331 VSIG2Q96IQ7 327 aa12.89□□□□□ -0.35
LSM6-206ENST00000510331 ACTR3CQ9C0K3 210 aaPredicted RBP12.89□□□□□ -0.35
LSM6-206ENST00000510331 A0A1B0GVY2 172 aa12.88□□□□□ -0.35
LSM6-206ENST00000510331 PRSS29PA6NIE9 313 aa12.88□□□□□ -0.35
LSM6-206ENST00000510331 CXorf1O96002 111 aa12.88□□□□□ -0.35
LSM6-206ENST00000510331 TCRAP04437 139 aa12.88□□□□□ -0.35
LSM6-206ENST00000510331 ARL6IP6Q8N6S5 226 aa12.88□□□□□ -0.35
LSM6-206ENST00000510331 PKD1P98161 4303 aa12.88□□□□□ -0.35
LSM6-206ENST00000510331 TRGV11A0A075B6L2 103 aa12.87□□□□□ -0.35
LSM6-206ENST00000510331 H3BNG1 76 aa12.87□□□□□ -0.35
LSM6-206ENST00000510331 FAM159AQ6UWV7 190 aa12.87□□□□□ -0.35
LSM6-206ENST00000510331 TREM1Q9NP99 234 aa12.87□□□□□ -0.35
LSM6-206ENST00000510331 TMEM167BQ9NRX6 74 aa12.87□□□□□ -0.35
LSM6-206ENST00000510331 NBDYA0A0U1RRE5 68 aa12.86□□□□□ -0.35
LSM6-206ENST00000510331 C8orf49Q96NF6 230 aa12.86□□□□□ -0.35
LSM6-206ENST00000510331 CYTL1Q9NRR1 136 aa12.86□□□□□ -0.35
LSM6-206ENST00000510331 DNAH11Q96DT5 4516 aa12.86□□□□□ -0.35
LSM6-206ENST00000510331 A0A096LPF7 62 aa12.85□□□□□ -0.35
LSM6-206ENST00000510331 CTXND1A0A1B0GTU2 59 aa12.85□□□□□ -0.35
LSM6-206ENST00000510331 SERTM2A0A1B0GWG4 89 aa12.85□□□□□ -0.35
LSM6-206ENST00000510331 TDRG1Q3Y452 100 aa12.85□□□□□ -0.35
LSM6-206ENST00000510331 C1orf134Q5TEV5 83 aa12.85□□□□□ -0.35
LSM6-206ENST00000510331 DYNC1H1Q14204 4646 aaKnown RBP12.85□□□□□ -0.35
LSM6-206ENST00000510331 TRAV21A0A0B4J279 112 aa12.84□□□□□ -0.35
LSM6-206ENST00000510331 IGLV2-11P01706 119 aa12.84□□□□□ -0.35
LSM6-206ENST00000510331 TYMSP04818 313 aa12.84□□□□□ -0.35
LSM6-206ENST00000510331 FGF8P55075 233 aaPredicted RBP12.84□□□□□ -0.35
LSM6-206ENST00000510331 SUMO1P63165 101 aaKnown RBP12.84□□□□□ -0.35
LSM6-206ENST00000510331 ESRGQ1W209 222 aa12.84□□□□□ -0.35
LSM6-206ENST00000510331 AKR1C8PQ5T2L2 129 aa12.84□□□□□ -0.35
LSM6-206ENST00000510331 NDFIP1Q9BT67 221 aa12.84□□□□□ -0.35
LSM6-206ENST00000510331 IGHV3-16A0A0C4DH30 117 aa12.83□□□□□ -0.36
LSM6-206ENST00000510331 GNRH2O43555 120 aa12.83□□□□□ -0.36
LSM6-206ENST00000510331 SFTA3P0C7M3 94 aa12.83□□□□□ -0.36
LSM6-206ENST00000510331 ZNF80P51504 273 aaPredicted RBP12.83□□□□□ -0.36
LSM6-206ENST00000510331 UBE2G2P60604 165 aa12.83□□□□□ -0.36
LSM6-206ENST00000510331 SOHLH1Q5JUK2 328 aa12.83□□□□□ -0.36
LSM6-206ENST00000510331 CYB561D1Q8N8Q1 229 aa12.83□□□□□ -0.36
LSM6-206ENST00000510331 KRTAP1-5Q9BYS1 174 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms