RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 C5orf51A6NDU8 294 aa6.65□□□□□ -1.34
SNF8-207ENST00000509995 CD3DP04234 171 aa6.65□□□□□ -1.34
SNF8-207ENST00000509995 SCGB2B2Q4G0G5 96 aa6.65□□□□□ -1.34
SNF8-207ENST00000509995 TMEM78Q5T7P6 136 aa6.65□□□□□ -1.34
SNF8-207ENST00000509995 ZNF546Q86UE3 836 aa6.65□□□□□ -1.34
SNF8-207ENST00000509995 CYB561D1Q8N8Q1 229 aa6.65□□□□□ -1.34
SNF8-207ENST00000509995 CHCHD7Q9BUK0 85 aa6.65□□□□□ -1.34
SNF8-207ENST00000509995 SHPKQ9UHJ6 478 aa6.65□□□□□ -1.34
SNF8-207ENST00000509995 IGKV2-40A0A087WW87 121 aaPredicted RBP6.64□□□□□ -1.35
SNF8-207ENST00000509995 A0A087WX48 190 aa6.64□□□□□ -1.35
SNF8-207ENST00000509995 IGHV3-73A0A0B4J1V6 119 aa6.64□□□□□ -1.35
SNF8-207ENST00000509995 K7EPK0 472 aa6.64□□□□□ -1.35
SNF8-207ENST00000509995 IGKV2D-40P01614 121 aaPredicted RBP6.64□□□□□ -1.35
SNF8-207ENST00000509995 TBPP20226 339 aa6.64□□□□□ -1.35
SNF8-207ENST00000509995 RPP30P78346 268 aaKnown RBP6.64□□□□□ -1.35
SNF8-207ENST00000509995 PXDC1Q5TGL8 231 aa6.64□□□□□ -1.35
SNF8-207ENST00000509995 LYZL2Q7Z4W2 148 aa6.64□□□□□ -1.35
SNF8-207ENST00000509995 OR51S1Q8NGJ8 323 aa6.64□□□□□ -1.35
SNF8-207ENST00000509995 ZNF492Q9P255 531 aa6.64□□□□□ -1.35
SNF8-207ENST00000509995 GAGE12JA6NER3 117 aa6.63□□□□□ -1.35
SNF8-207ENST00000509995 CIDEAO60543 219 aa6.63□□□□□ -1.35
SNF8-207ENST00000509995 MGST1P10620 155 aaKnown RBP6.63□□□□□ -1.35
SNF8-207ENST00000509995 CACNG7P62955 275 aa6.63□□□□□ -1.35
SNF8-207ENST00000509995 GAGE1Q13065 139 aa6.63□□□□□ -1.35
SNF8-207ENST00000509995 GAGE4Q13068 117 aa6.63□□□□□ -1.35
SNF8-207ENST00000509995 GAGE5Q13069 117 aa6.63□□□□□ -1.35
SNF8-207ENST00000509995 GAGE13Q4V321 117 aa6.63□□□□□ -1.35
SNF8-207ENST00000509995 CFAP126Q5VTH2 177 aa6.63□□□□□ -1.35
SNF8-207ENST00000509995 ENHOQ6UWT2 76 aa6.63□□□□□ -1.35
SNF8-207ENST00000509995 FAM159AQ6UWV7 190 aa6.63□□□□□ -1.35
SNF8-207ENST00000509995 CIB3Q96Q77 187 aaPredicted RBP6.63□□□□□ -1.35
SNF8-207ENST00000509995 PRELID1Q9Y255 219 aa6.63□□□□□ -1.35
SNF8-207ENST00000509995 TRBV7-9A0A0J9YWB2 115 aa6.62□□□□□ -1.35
SNF8-207ENST00000509995 LOC100506127A0A0U1RQW1 187 aa6.62□□□□□ -1.35
SNF8-207ENST00000509995 PGPA6NDG6 321 aa6.62□□□□□ -1.35
SNF8-207ENST00000509995 H3BP45 60 aa6.62□□□□□ -1.35
SNF8-207ENST00000509995 COX7A2P2O60397 106 aa6.62□□□□□ -1.35
SNF8-207ENST00000509995 CRPP02741 224 aa6.62□□□□□ -1.35
SNF8-207ENST00000509995 HIST1H1EP10412 219 aaKnown RBP6.62□□□□□ -1.35
SNF8-207ENST00000509995 INPP1P49441 399 aa6.62□□□□□ -1.35
SNF8-207ENST00000509995 SLC38A11Q08AI6 406 aa6.62□□□□□ -1.35
SNF8-207ENST00000509995 ZNF266Q14584 549 aa6.62□□□□□ -1.35
SNF8-207ENST00000509995 SURF2Q15527 256 aaPredicted RBP6.62□□□□□ -1.35
SNF8-207ENST00000509995 SPANXN5Q5MJ07 72 aa6.62□□□□□ -1.35
SNF8-207ENST00000509995 Q6AWC8 147 aa6.62□□□□□ -1.35
SNF8-207ENST00000509995 VCXQ9H320 206 aa6.62□□□□□ -1.35
SNF8-207ENST00000509995 TRBV19A0A075B6N1 114 aa6.61□□□□□ -1.35
SNF8-207ENST00000509995 MUC21A0A0G2JKD1 596 aa6.61□□□□□ -1.35
SNF8-207ENST00000509995 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.61□□□□□ -1.35
SNF8-207ENST00000509995 MED6O75586 246 aa6.61□□□□□ -1.35
SNF8-207ENST00000509995 SMIM18P0DKX4 95 aa6.61□□□□□ -1.35
SNF8-207ENST00000509995 SRSF3P84103 164 aaKnown RBP6.61□□□□□ -1.35
SNF8-207ENST00000509995 KCNIP4Q6PIL6 250 aa6.61□□□□□ -1.35
SNF8-207ENST00000509995 CLRN3Q8NCR9 226 aa6.61□□□□□ -1.35
SNF8-207ENST00000509995 LYPD6BQ8NI32 183 aa6.61□□□□□ -1.35
SNF8-207ENST00000509995 NAGKQ9UJ70 344 aa6.61□□□□□ -1.35
SNF8-207ENST00000509995 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.6□□□□□ -1.35
SNF8-207ENST00000509995 SMIM31A0A1B0GVY4 71 aa6.6□□□□□ -1.35
SNF8-207ENST00000509995 WRBO00258 174 aa6.6□□□□□ -1.35
SNF8-207ENST00000509995 AGPAT2O15120 278 aa6.6□□□□□ -1.35
SNF8-207ENST00000509995 NDUFB4O95168 129 aa6.6□□□□□ -1.35
SNF8-207ENST00000509995 ZNF138P52744 262 aa6.6□□□□□ -1.35
SNF8-207ENST00000509995 DMRTA1Q5VZB9 504 aa6.6□□□□□ -1.35
SNF8-207ENST00000509995 C10orf113Q5VZT2 155 aa6.6□□□□□ -1.35
SNF8-207ENST00000509995 Q6ZRP5 223 aa6.6□□□□□ -1.35
SNF8-207ENST00000509995 CROCCP3Q8IVE0 287 aa6.6□□□□□ -1.35
SNF8-207ENST00000509995 EXOC3-AS1Q8N2X6 119 aa6.6□□□□□ -1.35
SNF8-207ENST00000509995 PRR26Q8N8Z3 221 aa6.6□□□□□ -1.35
SNF8-207ENST00000509995 RAB2BQ8WUD1 216 aa6.6□□□□□ -1.35
SNF8-207ENST00000509995 STRAPQ9Y3F4 350 aaKnown RBP6.6□□□□□ -1.35
SNF8-207ENST00000509995 hDV102S1A0JD36 115 aa6.59□□□□□ -1.35
SNF8-207ENST00000509995 GOSR2O14653 212 aa6.59□□□□□ -1.35
SNF8-207ENST00000509995 GNRH2O43555 120 aa6.59□□□□□ -1.35
SNF8-207ENST00000509995 SYNGR2O43760 224 aa6.59□□□□□ -1.35
SNF8-207ENST00000509995 TCRBP04435 133 aa6.59□□□□□ -1.35
SNF8-207ENST00000509995 MAJINQ3KP22 176 aa6.59□□□□□ -1.35
SNF8-207ENST00000509995 ZNF876PQ49A33 203 aa6.59□□□□□ -1.35
SNF8-207ENST00000509995 C20orf85Q9H1P6 137 aa6.59□□□□□ -1.35
SNF8-207ENST00000509995 SLC39A9Q9NUM3 307 aa6.59□□□□□ -1.35
SNF8-207ENST00000509995 BLOC1S6Q9UL45 172 aa6.59□□□□□ -1.35
SNF8-207ENST00000509995 GPR132Q9UNW8 380 aa6.59□□□□□ -1.35
SNF8-207ENST00000509995 KCNIP3Q9Y2W7 256 aa6.59□□□□□ -1.35
SNF8-207ENST00000509995 RAB3DO95716 219 aa6.58□□□□□ -1.36
SNF8-207ENST00000509995 SLPIP03973 132 aa6.58□□□□□ -1.36
SNF8-207ENST00000509995 TYMSP04818 313 aa6.58□□□□□ -1.36
SNF8-207ENST00000509995 RRAS2P62070 204 aaPredicted RBP6.58□□□□□ -1.36
SNF8-207ENST00000509995 PDE6HQ13956 83 aa6.58□□□□□ -1.36
SNF8-207ENST00000509995 MIAQ16674 131 aa6.58□□□□□ -1.36
SNF8-207ENST00000509995 FAAP20Q6NZ36 180 aa6.58□□□□□ -1.36
SNF8-207ENST00000509995 STPG4Q8N801 248 aa6.58□□□□□ -1.36
SNF8-207ENST00000509995 C15orf54Q8N8G6 183 aa6.58□□□□□ -1.36
SNF8-207ENST00000509995 TMEM75Q8N9X5 138 aa6.58□□□□□ -1.36
SNF8-207ENST00000509995 LINC00479Q96M42 142 aa6.58□□□□□ -1.36
SNF8-207ENST00000509995 ATP5SQ99766 215 aa6.58□□□□□ -1.36
SNF8-207ENST00000509995 NPVFQ9HCQ7 196 aa6.58□□□□□ -1.36
SNF8-207ENST00000509995 Q9UF83 564 aa6.58□□□□□ -1.36
SNF8-207ENST00000509995 CTDSPLO15194 276 aa6.57□□□□□ -1.36
SNF8-207ENST00000509995 APOA1P02647 267 aa6.57□□□□□ -1.36
SNF8-207ENST00000509995 LINC01547P58512 204 aaPredicted RBP6.57□□□□□ -1.36
SNF8-207ENST00000509995 SRPXP78539 464 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms