RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 DNAH5Q8TE73 4624 aa12.44□□□□□ -0.42
TPM3-220ENST00000509601 TRGV1A0A0A0MS02 117 aa12.43□□□□□ -0.42
TPM3-220ENST00000509601 RGS13O14921 159 aa12.43□□□□□ -0.42
TPM3-220ENST00000509601 ZNF266Q14584 549 aa12.43□□□□□ -0.42
TPM3-220ENST00000509601 ACOT6Q3I5F7 207 aaPredicted RBP12.43□□□□□ -0.42
TPM3-220ENST00000509601 SOHLH1Q5JUK2 328 aa12.43□□□□□ -0.42
TPM3-220ENST00000509601 IBA57Q5T440 356 aaKnown RBP12.43□□□□□ -0.42
TPM3-220ENST00000509601 TRGV2A0A075B6R0 118 aa12.42□□□□□ -0.42
TPM3-220ENST00000509601 PGPA6NDG6 321 aa12.42□□□□□ -0.42
TPM3-220ENST00000509601 RAB2AP61019 212 aa12.42□□□□□ -0.42
TPM3-220ENST00000509601 Q5BKY6 102 aa12.42□□□□□ -0.42
TPM3-220ENST00000509601 Q9H8V8 135 aa12.42□□□□□ -0.42
TPM3-220ENST00000509601 OTORQ9NRC9 128 aa12.42□□□□□ -0.42
TPM3-220ENST00000509601 PTTG1O95997 202 aa12.41□□□□□ -0.42
TPM3-220ENST00000509601 HYLS1Q96M11 299 aa12.41□□□□□ -0.42
TPM3-220ENST00000509601 A0A096LPF7 62 aa12.4□□□□□ -0.42
TPM3-220ENST00000509601 A0A1W2PPV4 95 aa12.4□□□□□ -0.42
TPM3-220ENST00000509601 Q6AWC8 147 aa12.4□□□□□ -0.42
TPM3-220ENST00000509601 PQLC2Q6ZP29 291 aa12.4□□□□□ -0.42
TPM3-220ENST00000509601 OR10G4Q8NGN3 311 aa12.4□□□□□ -0.42
TPM3-220ENST00000509601 OR10G9Q8NGN4 311 aa12.4□□□□□ -0.42
TPM3-220ENST00000509601 OR10G7Q8NGN6 311 aa12.4□□□□□ -0.42
TPM3-220ENST00000509601 TMED6Q8WW62 240 aa12.4□□□□□ -0.42
TPM3-220ENST00000509601 KRTAP17-1Q9BYP8 105 aa12.4□□□□□ -0.42
TPM3-220ENST00000509601 MED28Q9H204 178 aa12.4□□□□□ -0.42
TPM3-220ENST00000509601 LENEPQ9Y5L5 61 aa12.4□□□□□ -0.42
TPM3-220ENST00000509601 PCLOQ9Y6V0 5065 aa12.39□□□□□ -0.43
TPM3-220ENST00000509601 MUC21Q5SSG8 566 aa12.39□□□□□ -0.43
TPM3-220ENST00000509601 C6orf223Q8N319 242 aa12.39□□□□□ -0.43
TPM3-220ENST00000509601 ST6GAL2Q96JF0 529 aa12.39□□□□□ -0.43
TPM3-220ENST00000509601 AQP10Q96PS8 301 aa12.39□□□□□ -0.43
TPM3-220ENST00000509601 UPK3BQ9BT76 320 aa12.39□□□□□ -0.43
TPM3-220ENST00000509601 MRPL16Q9NX20 251 aaKnown RBP12.39□□□□□ -0.43
TPM3-220ENST00000509601 MDFICQ9P1T7 246 aa12.39□□□□□ -0.43
TPM3-220ENST00000509601 HSPG2P98160 4391 aa12.39□□□□□ -0.43
TPM3-220ENST00000509601 HMGB3O15347 200 aaKnown RBP12.38□□□□□ -0.43
TPM3-220ENST00000509601 TNP2Q05952 138 aa12.38□□□□□ -0.43
TPM3-220ENST00000509601 ARL6IP6Q8N6S5 226 aa12.38□□□□□ -0.43
TPM3-220ENST00000509601 OR2G3Q8NGZ4 309 aa12.38□□□□□ -0.43
TPM3-220ENST00000509601 TVP23CQ96ET8 276 aa12.38□□□□□ -0.43
TPM3-220ENST00000509601 ARPC5LQ9BPX5 153 aa12.38□□□□□ -0.43
TPM3-220ENST00000509601 IGHV3-53P01767 116 aa12.37□□□□□ -0.43
TPM3-220ENST00000509601 FHL2Q14192 279 aa12.37□□□□□ -0.43
TPM3-220ENST00000509601 HSD17B11Q8NBQ5 300 aa12.37□□□□□ -0.43
TPM3-220ENST00000509601 SUN5Q8TC36 379 aa12.37□□□□□ -0.43
TPM3-220ENST00000509601 KRTAP1-5Q9BYS1 174 aa12.37□□□□□ -0.43
TPM3-220ENST00000509601 MRPS16Q9Y3D3 137 aaKnown RBP12.37□□□□□ -0.43
TPM3-220ENST00000509601 STAG3L2P0CL84 134 aa12.36□□□□□ -0.43
TPM3-220ENST00000509601 STAG3L3P0CL85 134 aa12.36□□□□□ -0.43
TPM3-220ENST00000509601 ATP6V0CP27449 155 aa12.36□□□□□ -0.43
TPM3-220ENST00000509601 GOLT1AQ6ZVE7 132 aa12.36□□□□□ -0.43
TPM3-220ENST00000509601 CMTM2Q8TAZ6 248 aa12.36□□□□□ -0.43
TPM3-220ENST00000509601 PSMG3Q9BT73 122 aaPredicted RBP12.36□□□□□ -0.43
TPM3-220ENST00000509601 APOBP04114 4563 aaKnown RBP12.36□□□□□ -0.43
TPM3-220ENST00000509601 ARL14EPLP0DKL9 152 aa12.35□□□□□ -0.43
TPM3-220ENST00000509601 MED14OSP0DP75 135 aa12.35□□□□□ -0.43
TPM3-220ENST00000509601 CDC34P49427 236 aaPredicted RBP12.35□□□□□ -0.43
TPM3-220ENST00000509601 GNG5P63218 68 aa12.35□□□□□ -0.43
TPM3-220ENST00000509601 ZNF415Q09FC8 603 aa12.35□□□□□ -0.43
TPM3-220ENST00000509601 FAM74A1Q5RGS3 127 aa12.35□□□□□ -0.43
TPM3-220ENST00000509601 RAB24Q969Q5 203 aa12.35□□□□□ -0.43
TPM3-220ENST00000509601 RPH3ALQ9UNE2 315 aa12.35□□□□□ -0.43
TPM3-220ENST00000509601 TRAV8-1A0A0A6YYK1 113 aa12.34□□□□□ -0.43
TPM3-220ENST00000509601 PAX4O43316 350 aa12.34□□□□□ -0.43
TPM3-220ENST00000509601 GNRH2O43555 120 aa12.34□□□□□ -0.43
TPM3-220ENST00000509601 GIPP09681 153 aaPredicted RBP12.34□□□□□ -0.43
TPM3-220ENST00000509601 CRYBA4P53673 196 aa12.34□□□□□ -0.43
TPM3-220ENST00000509601 TMEM183BQ1AE95 376 aa12.34□□□□□ -0.43
TPM3-220ENST00000509601 TDRG1Q3Y452 100 aa12.34□□□□□ -0.43
TPM3-220ENST00000509601 FAM159AQ6UWV7 190 aa12.34□□□□□ -0.43
TPM3-220ENST00000509601 TMEM183AQ8IXX5 376 aa12.34□□□□□ -0.43
TPM3-220ENST00000509601 RASL10AQ92737 203 aa12.34□□□□□ -0.43
TPM3-220ENST00000509601 PRO0255Q9UI72 69 aa12.34□□□□□ -0.43
TPM3-220ENST00000509601 SERF2P84101 59 aa12.33□□□□□ -0.44
TPM3-220ENST00000509601 ZNF575Q86XF7 245 aa12.33□□□□□ -0.44
TPM3-220ENST00000509601 SGK494Q96LW2 274 aa12.33□□□□□ -0.44
TPM3-220ENST00000509601 SPXQ9BT56 116 aa12.33□□□□□ -0.44
TPM3-220ENST00000509601 SH3BGRL3Q9H299 93 aa12.33□□□□□ -0.44
TPM3-220ENST00000509601 HHLA3Q9XRX5 114 aa12.33□□□□□ -0.44
TPM3-220ENST00000509601 ABCA13Q86UQ4 5058 aa12.32□□□□□ -0.44
TPM3-220ENST00000509601 RNF222A6NCQ9 220 aa12.32□□□□□ -0.44
TPM3-220ENST00000509601 GCHFRP30047 84 aa12.32□□□□□ -0.44
TPM3-220ENST00000509601 SLAQ13239 276 aa12.32□□□□□ -0.44
TPM3-220ENST00000509601 IQCF2Q8IXL9 164 aa12.32□□□□□ -0.44
TPM3-220ENST00000509601 ASB13Q8WXK3 278 aa12.32□□□□□ -0.44
TPM3-220ENST00000509601 ZNF479Q96JC4 524 aa12.32□□□□□ -0.44
TPM3-220ENST00000509601 C8orf49Q96NF6 230 aa12.32□□□□□ -0.44
TPM3-220ENST00000509601 TREM1Q9NP99 234 aa12.32□□□□□ -0.44
TPM3-220ENST00000509601 TNFSF18Q9UNG2 199 aa12.32□□□□□ -0.44
TPM3-220ENST00000509601 TRGV11A0A075B6L2 103 aa12.31□□□□□ -0.44
TPM3-220ENST00000509601 IGHV3-16A0A0C4DH30 117 aa12.31□□□□□ -0.44
TPM3-220ENST00000509601 A0A1W2PPQ1 181 aa12.31□□□□□ -0.44
TPM3-220ENST00000509601 MBP02144 154 aa12.31□□□□□ -0.44
TPM3-220ENST00000509601 SFTA3P0C7M3 94 aa12.31□□□□□ -0.44
TPM3-220ENST00000509601 RPL7L1Q6DKI1 246 aaKnown RBP12.31□□□□□ -0.44
TPM3-220ENST00000509601 TRAV21A0A0B4J279 112 aa12.3□□□□□ -0.44
TPM3-220ENST00000509601 F6UZH7 168 aa12.3□□□□□ -0.44
TPM3-220ENST00000509601 G3V3Q6 166 aa12.3□□□□□ -0.44
TPM3-220ENST00000509601 TCRAP04437 139 aa12.3□□□□□ -0.44
TPM3-220ENST00000509601 TTC32Q5I0X7 151 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 156.4 ms