RNA–Protein interactions for RNA: ENST00000509368.6

PDE4D-218, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-218ENST00000509368 HLA-DQB1P01920 261 aa1.43□□□□□ -2.18
PDE4D-218ENST00000509368 CCL1P22362 96 aa1.43□□□□□ -2.18
PDE4D-218ENST00000509368 RPL22P35268 128 aaKnown RBP1.43□□□□□ -2.18
PDE4D-218ENST00000509368 NEDD8Q15843 81 aa1.43□□□□□ -2.18
PDE4D-218ENST00000509368 RTL8BQ17RB0 113 aa1.43□□□□□ -2.18
PDE4D-218ENST00000509368 IQCJQ1A5X6 159 aa1.43□□□□□ -2.18
PDE4D-218ENST00000509368 VMA21Q3ZAQ7 101 aa1.43□□□□□ -2.18
PDE4D-218ENST00000509368 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.43□□□□□ -2.18
PDE4D-218ENST00000509368 BCL2L15Q5TBC7 163 aa1.43□□□□□ -2.18
PDE4D-218ENST00000509368 C1orf140Q5VVS0 124 aa1.43□□□□□ -2.18
PDE4D-218ENST00000509368 Q5XG85 94 aa1.43□□□□□ -2.18
PDE4D-218ENST00000509368 TMEM14EPQ6UXP3 125 aa1.43□□□□□ -2.18
PDE4D-218ENST00000509368 TIFABQ6ZNK6 161 aa1.43□□□□□ -2.18
PDE4D-218ENST00000509368 FAM19A3Q7Z5A8 133 aa1.43□□□□□ -2.18
PDE4D-218ENST00000509368 AMN1Q8IY45 258 aa1.43□□□□□ -2.18
PDE4D-218ENST00000509368 ST20-AS1Q8NBB2 130 aa1.43□□□□□ -2.18
PDE4D-218ENST00000509368 ATP6V0E2Q8NHE4 81 aa1.43□□□□□ -2.18
PDE4D-218ENST00000509368 SLC25A44Q96H78 314 aaPredicted RBP1.43□□□□□ -2.18
PDE4D-218ENST00000509368 SDF2Q99470 211 aa1.43□□□□□ -2.18
PDE4D-218ENST00000509368 DPY30Q9C005 99 aa1.43□□□□□ -2.18
PDE4D-218ENST00000509368 ZNF436Q9C0F3 470 aaPredicted RBP1.43□□□□□ -2.18
PDE4D-218ENST00000509368 AICDAQ9GZX7 198 aa1.43□□□□□ -2.18
PDE4D-218ENST00000509368 NAA60Q9H7X0 242 aa1.43□□□□□ -2.18
PDE4D-218ENST00000509368 RABAC1Q9UI14 185 aa1.43□□□□□ -2.18
PDE4D-218ENST00000509368 MRPS16Q9Y3D3 137 aaKnown RBP1.43□□□□□ -2.18
PDE4D-218ENST00000509368 DOCK4Q8N1I0 1966 aa1.43□□□□□ -2.18
PDE4D-218ENST00000509368 CACNA1DQ01668 2161 aa1.43□□□□□ -2.18
PDE4D-218ENST00000509368 SHANK1Q9Y566 2161 aa1.43□□□□□ -2.18
PDE4D-218ENST00000509368 A0A0D9SG52 128 aa1.43□□□□□ -2.18
PDE4D-218ENST00000509368 BBIP1A8MTZ0 92 aa1.43□□□□□ -2.18
PDE4D-218ENST00000509368 CLDN25C9JDP6 229 aa1.43□□□□□ -2.18
PDE4D-218ENST00000509368 TMEM262E9PQX1 116 aa1.43□□□□□ -2.18
PDE4D-218ENST00000509368 PANO1I0J062 215 aa1.43□□□□□ -2.18
PDE4D-218ENST00000509368 J3QQQ9 107 aa1.43□□□□□ -2.18
PDE4D-218ENST00000509368 HRASP01112 189 aa1.43□□□□□ -2.18
PDE4D-218ENST00000509368 LINC00869P0C866 280 aa1.43□□□□□ -2.18
PDE4D-218ENST00000509368 CRYBB3P26998 211 aa1.43□□□□□ -2.18
PDE4D-218ENST00000509368 KRTAP10-12P60413 245 aa1.43□□□□□ -2.18
PDE4D-218ENST00000509368 KLRD1Q13241 179 aa1.43□□□□□ -2.18
PDE4D-218ENST00000509368 HMGN3Q15651 99 aa1.43□□□□□ -2.18
PDE4D-218ENST00000509368 ABCA11PQ4W5N1 156 aa1.43□□□□□ -2.18
PDE4D-218ENST00000509368 TMEM155Q4W5P6 130 aa1.43□□□□□ -2.18
PDE4D-218ENST00000509368 C22orf39Q6P5X5 142 aa1.43□□□□□ -2.18
PDE4D-218ENST00000509368 RASL11AQ6T310 242 aa1.43□□□□□ -2.18
PDE4D-218ENST00000509368 KTN1-AS1Q86SY8 53 aa1.43□□□□□ -2.18
PDE4D-218ENST00000509368 C1orf174Q8IYL3 243 aa1.43□□□□□ -2.18
PDE4D-218ENST00000509368 MIR7-3HGQ8N6C7 128 aa1.43□□□□□ -2.18
PDE4D-218ENST00000509368 OR5D16Q8NGK9 328 aa1.43□□□□□ -2.18
PDE4D-218ENST00000509368 OR5AK2Q8NH90 309 aa1.43□□□□□ -2.18
PDE4D-218ENST00000509368 CYYR1Q96J86 154 aa1.43□□□□□ -2.18
PDE4D-218ENST00000509368 YPEL2Q96QA6 119 aa1.43□□□□□ -2.18
PDE4D-218ENST00000509368 REG4Q9BYZ8 158 aa1.43□□□□□ -2.18
PDE4D-218ENST00000509368 ZNF331Q9NQX6 463 aaPredicted RBP1.43□□□□□ -2.18
PDE4D-218ENST00000509368 TNFSF18Q9UNG2 199 aa1.43□□□□□ -2.18
PDE4D-218ENST00000509368 ZNF706Q9Y5V0 76 aaPredicted RBP1.43□□□□□ -2.18
PDE4D-218ENST00000509368 PXMP4Q9Y6I8 212 aa1.43□□□□□ -2.18
PDE4D-218ENST00000509368 SDK2Q58EX2 2172 aa1.43□□□□□ -2.18
PDE4D-218ENST00000509368 MTORP42345 2549 aa1.42□□□□□ -2.18
PDE4D-218ENST00000509368 TRAV9-1A0A075B6T8 112 aa1.42□□□□□ -2.18
PDE4D-218ENST00000509368 LOC102725191A0A1B0GVB3 256 aa1.42□□□□□ -2.18
PDE4D-218ENST00000509368 FNDC10F2Z333 226 aa1.42□□□□□ -2.18
PDE4D-218ENST00000509368 UBE2L6O14933 153 aa1.42□□□□□ -2.18
PDE4D-218ENST00000509368 REG1AP05451 166 aa1.42□□□□□ -2.18
PDE4D-218ENST00000509368 SEC11BP0C7V7 166 aa1.42□□□□□ -2.18
PDE4D-218ENST00000509368 S100A7P31151 101 aa1.42□□□□□ -2.18
PDE4D-218ENST00000509368 GABARAPL2P60520 117 aa1.42□□□□□ -2.18
PDE4D-218ENST00000509368 MRPS36P82909 103 aaKnown RBP1.42□□□□□ -2.18
PDE4D-218ENST00000509368 ASB16-AS1Q495Z4 193 aa1.42□□□□□ -2.18
PDE4D-218ENST00000509368 SLC25A34Q6PIV7 304 aa1.42□□□□□ -2.18
PDE4D-218ENST00000509368 Q6ZQT7 251 aa1.42□□□□□ -2.18
PDE4D-218ENST00000509368 PHF5AQ7RTV0 110 aaKnown RBP1.42□□□□□ -2.18
PDE4D-218ENST00000509368 OR8D4Q8NGM9 314 aa1.42□□□□□ -2.18
PDE4D-218ENST00000509368 ITLN2Q8WWU7 325 aaPredicted RBP1.42□□□□□ -2.18
PDE4D-218ENST00000509368 IGF2BP2-AS1Q96M15 143 aa1.42□□□□□ -2.18
PDE4D-218ENST00000509368 CCL13Q99616 98 aa1.42□□□□□ -2.18
PDE4D-218ENST00000509368 WDR61Q9GZS3 305 aaKnown RBP1.42□□□□□ -2.18
PDE4D-218ENST00000509368 ZNF286AQ9HBT8 521 aa1.42□□□□□ -2.18
PDE4D-218ENST00000509368 ASF1BQ9NVP2 202 aa1.42□□□□□ -2.18
PDE4D-218ENST00000509368 FUT9Q9Y231 359 aa1.42□□□□□ -2.18
PDE4D-218ENST00000509368 POLEQ07864 2286 aa1.42□□□□□ -2.18
PDE4D-218ENST00000509368 ZFC3H1O60293 1989 aaKnown RBP1.42□□□□□ -2.18
PDE4D-218ENST00000509368 TACC2O95359 2948 aa1.42□□□□□ -2.18
PDE4D-218ENST00000509368 RP1P56715 2156 aa1.42□□□□□ -2.18
PDE4D-218ENST00000509368 ANKHD1Q8IWZ3 2542 aaKnown RBP1.42□□□□□ -2.18
PDE4D-218ENST00000509368 DHRS12A0PJE2 317 aa1.42□□□□□ -2.18
PDE4D-218ENST00000509368 OR2T8A6NH00 312 aa1.42□□□□□ -2.18
PDE4D-218ENST00000509368 ZNF850A8MQ14 1090 aa1.42□□□□□ -2.18
PDE4D-218ENST00000509368 C11orf94C9JXX5 98 aa1.42□□□□□ -2.18
PDE4D-218ENST00000509368 ZNF670-ZNF695F2Z2N8 137 aa1.42□□□□□ -2.18
PDE4D-218ENST00000509368 RER1O15258 196 aa1.42□□□□□ -2.18
PDE4D-218ENST00000509368 NDUFB3O43676 98 aa1.42□□□□□ -2.18
PDE4D-218ENST00000509368 CD2P06729 351 aa1.42□□□□□ -2.18
PDE4D-218ENST00000509368 KRTAP1-4P0C5Y4 121 aa1.42□□□□□ -2.18
PDE4D-218ENST00000509368 IGHV3-30-3P0DP02 117 aa1.42□□□□□ -2.18
PDE4D-218ENST00000509368 COX6B1P14854 86 aa1.42□□□□□ -2.18
PDE4D-218ENST00000509368 NFYBP25208 207 aa1.42□□□□□ -2.18
PDE4D-218ENST00000509368 DEFA1P59665 94 aa1.42□□□□□ -2.18
PDE4D-218ENST00000509368 DEFA3P59666 94 aa1.42□□□□□ -2.18
PDE4D-218ENST00000509368 LSM3P62310 102 aaKnown RBP1.42□□□□□ -2.18
PDE4D-218ENST00000509368 HIST1H4AP62805 103 aaKnown RBP1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms