RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 OR10J3Q5JRS4 329 aa11.3□□□□□ -0.6
PHF3-209ENST00000509330 PRR9Q5T870 116 aa11.3□□□□□ -0.6
PHF3-209ENST00000509330 NRN1Q9NPD7 142 aa11.3□□□□□ -0.6
PHF3-209ENST00000509330 C11orf21Q9P2W6 132 aa11.3□□□□□ -0.6
PHF3-209ENST00000509330 FAM209BQ5JX69 171 aa11.29□□□□□ -0.6
PHF3-209ENST00000509330 BORCS7Q96B45 105 aa11.29□□□□□ -0.6
PHF3-209ENST00000509330 TWIST1Q15672 202 aa11.28□□□□□ -0.6
PHF3-209ENST00000509330 AMN1Q8IY45 258 aa11.28□□□□□ -0.6
PHF3-209ENST00000509330 FABP5P3A8MUU1 101 aa11.28□□□□□ -0.6
PHF3-209ENST00000509330 HAX1O00165 279 aa11.28□□□□□ -0.6
PHF3-209ENST00000509330 HSBP1O75506 76 aa11.28□□□□□ -0.6
PHF3-209ENST00000509330 IGKV3-20P01619 116 aa11.28□□□□□ -0.6
PHF3-209ENST00000509330 GPX1P07203 203 aa11.28□□□□□ -0.6
PHF3-209ENST00000509330 BMI1P35226 326 aa11.28□□□□□ -0.6
PHF3-209ENST00000509330 RIGQ13278 110 aa11.28□□□□□ -0.6
PHF3-209ENST00000509330 C9orf139Q6ZV77 190 aa11.28□□□□□ -0.6
PHF3-209ENST00000509330 FER1L6-AS1Q8NA97 138 aa11.28□□□□□ -0.6
PHF3-209ENST00000509330 ATP6V0BQ99437 205 aa11.28□□□□□ -0.6
PHF3-209ENST00000509330 SMPXQ9UHP9 88 aa11.28□□□□□ -0.6
PHF3-209ENST00000509330 LOC102724200A0A096LPH7 203 aaPredicted RBP11.28□□□□□ -0.6
PHF3-209ENST00000509330 PRSS57Q6UWY2 283 aa11.28□□□□□ -0.6
PHF3-209ENST00000509330 YAE1D1Q9NRH1 226 aa11.28□□□□□ -0.6
PHF3-209ENST00000509330 FAM231BA6NCW3 169 aa11.27□□□□□ -0.61
PHF3-209ENST00000509330 SMKR1H3BMG3 65 aa11.27□□□□□ -0.61
PHF3-209ENST00000509330 ZNF324O75467 553 aaPredicted RBP11.27□□□□□ -0.61
PHF3-209ENST00000509330 ZNF575Q86XF7 245 aa11.27□□□□□ -0.61
PHF3-209ENST00000509330 SMR3AQ99954 134 aa11.27□□□□□ -0.61
PHF3-209ENST00000509330 TDRG1Q3Y452 100 aa11.27□□□□□ -0.61
PHF3-209ENST00000509330 NIT1Q86X76 327 aa11.27□□□□□ -0.61
PHF3-209ENST00000509330 NIPBLQ6KC79 2804 aaeCLIP11.26□□□□□ -0.616e-6■■□□□ 14.1
PHF3-209ENST00000509330 IGKV3D-20A0A0C4DH25 116 aa11.26□□□□□ -0.61
PHF3-209ENST00000509330 SOCS3O14543 225 aa11.26□□□□□ -0.61
PHF3-209ENST00000509330 BRI3O95415 125 aa11.26□□□□□ -0.61
PHF3-209ENST00000509330 ZNF688P0C7X2 276 aa11.26□□□□□ -0.61
PHF3-209ENST00000509330 HOXD3P31249 432 aaPredicted RBP11.26□□□□□ -0.61
PHF3-209ENST00000509330 SLURP1P55000 103 aa11.26□□□□□ -0.61
PHF3-209ENST00000509330 KLHDC1Q8N7A1 406 aa11.26□□□□□ -0.61
PHF3-209ENST00000509330 URB1-AS1Q96HZ7 61 aa11.26□□□□□ -0.61
PHF3-209ENST00000509330 LOC389332A0A1B0GUA5 103 aa11.26□□□□□ -0.61
PHF3-209ENST00000509330 S100A12P80511 92 aa11.26□□□□□ -0.61
PHF3-209ENST00000509330 NCR2O95944 276 aa11.25□□□□□ -0.61
PHF3-209ENST00000509330 PAFAH1B2P68402 229 aa11.25□□□□□ -0.61
PHF3-209ENST00000509330 ZNF664Q8N3J9 261 aa11.25□□□□□ -0.61
PHF3-209ENST00000509330 OR10J6PQ8NGY7 276 aa11.25□□□□□ -0.61
PHF3-209ENST00000509330 M0R2Z0 102 aa11.25□□□□□ -0.61
PHF3-209ENST00000509330 ANK3Q12955 4377 aaKnown RBP11.25□□□□□ -0.61
PHF3-209ENST00000509330 A0A1W2PRX2 142 aa11.25□□□□□ -0.61
PHF3-209ENST00000509330 RBAKDNA6NC62 111 aa11.25□□□□□ -0.61
PHF3-209ENST00000509330 ESDP10768 282 aa11.25□□□□□ -0.61
PHF3-209ENST00000509330 AGRNO00468 2067 aa11.24□□□□□ -0.61
PHF3-209ENST00000509330 DNAJC9-AS1A6NH13 148 aa11.24□□□□□ -0.61
PHF3-209ENST00000509330 D6R8Y8 96 aa11.24□□□□□ -0.61
PHF3-209ENST00000509330 LGALS1P09382 135 aaKnown RBP11.24□□□□□ -0.61
PHF3-209ENST00000509330 ESM1Q9NQ30 184 aa11.24□□□□□ -0.61
PHF3-209ENST00000509330 FXYD7P58549 80 aa11.24□□□□□ -0.61
PHF3-209ENST00000509330 ATOH7Q8N100 152 aa11.24□□□□□ -0.61
PHF3-209ENST00000509330 RNASE4P34096 147 aaKnown RBP11.23□□□□□ -0.61
PHF3-209ENST00000509330 PSMG4Q5JS54 123 aa11.23□□□□□ -0.61
PHF3-209ENST00000509330 C9orf47Q6ZRZ4 202 aa11.23□□□□□ -0.61
PHF3-209ENST00000509330 ARL6IP6Q8N6S5 226 aa11.23□□□□□ -0.61
PHF3-209ENST00000509330 UFC1Q9Y3C8 167 aa11.23□□□□□ -0.61
PHF3-209ENST00000509330 HIVEP2P31629 2446 aa11.23□□□□□ -0.61
PHF3-209ENST00000509330 H0Y8G0 127 aa11.23□□□□□ -0.61
PHF3-209ENST00000509330 OR10AG1Q8NH19 301 aa11.23□□□□□ -0.61
PHF3-209ENST00000509330 FBLL1A6NHQ2 334 aaKnown RBP11.22□□□□□ -0.61
PHF3-209ENST00000509330 GAS8-AS1O95177 125 aa11.22□□□□□ -0.61
PHF3-209ENST00000509330 ELANEP08246 267 aa11.22□□□□□ -0.61
PHF3-209ENST00000509330 COX8CQ7Z4L0 72 aa11.22□□□□□ -0.61
PHF3-209ENST00000509330 OR8A1Q8NGG7 326 aa11.22□□□□□ -0.61
PHF3-209ENST00000509330 MS4A6AQ9H2W1 248 aa11.22□□□□□ -0.61
PHF3-209ENST00000509330 H3BVH4 76 aa11.22□□□□□ -0.61
PHF3-209ENST00000509330 KLF5Q13887 457 aaPredicted RBP11.22□□□□□ -0.61
PHF3-209ENST00000509330 TCTEX1D4Q5JR98 221 aa11.22□□□□□ -0.61
PHF3-209ENST00000509330 Q6AWC8 147 aa11.22□□□□□ -0.61
PHF3-209ENST00000509330 LINC00173Q6ZV60 143 aa11.22□□□□□ -0.61
PHF3-209ENST00000509330 OR11H1Q8NG94 326 aa11.22□□□□□ -0.61
PHF3-209ENST00000509330 IGLC6P0CF74 106 aa11.22□□□□□ -0.61
PHF3-209ENST00000509330 MRPL53Q96EL3 112 aaKnown RBP11.22□□□□□ -0.61
PHF3-209ENST00000509330 PAM16Q9Y3D7 125 aa11.22□□□□□ -0.61
PHF3-209ENST00000509330 C3orf79P0CE67 100 aa11.21□□□□□ -0.61
PHF3-209ENST00000509330 KRTAP1-1Q07627 177 aa11.21□□□□□ -0.61
PHF3-209ENST00000509330 Q6ZSV7 163 aa11.21□□□□□ -0.61
PHF3-209ENST00000509330 DCANP1Q8TF63 244 aa11.21□□□□□ -0.61
PHF3-209ENST00000509330 MCRIP2Q9BUT9 160 aaKnown RBP11.21□□□□□ -0.61
PHF3-209ENST00000509330 LINC01559Q495D7 138 aa11.21□□□□□ -0.62
PHF3-209ENST00000509330 UBE2E2Q96LR5 201 aa11.21□□□□□ -0.62
PHF3-209ENST00000509330 TSTD3H0UI37 97 aa11.2□□□□□ -0.62
PHF3-209ENST00000509330 ZFAND2AQ8N6M9 145 aa11.2□□□□□ -0.62
PHF3-209ENST00000509330 KLHL30-AS1Q8NEE0 82 aa11.2□□□□□ -0.62
PHF3-209ENST00000509330 RPS20P60866 119 aaKnown RBP11.2□□□□□ -0.62
PHF3-209ENST00000509330 SRSF2Q01130 221 aaKnown RBP11.2□□□□□ -0.62
PHF3-209ENST00000509330 MRPL51Q4U2R6 128 aaKnown RBP11.2□□□□□ -0.62
PHF3-209ENST00000509330 ZNF580Q9UK33 172 aa11.2□□□□□ -0.62
PHF3-209ENST00000509330 K7EMT4 169 aa11.19□□□□□ -0.62
PHF3-209ENST00000509330 OVOL1O14753 267 aa11.19□□□□□ -0.62
PHF3-209ENST00000509330 LINC00614P0C842 121 aa11.19□□□□□ -0.62
PHF3-209ENST00000509330 EVI2AP22794 236 aa11.19□□□□□ -0.62
PHF3-209ENST00000509330 TRAV12-2A0A075B6T6 113 aa11.19□□□□□ -0.62
PHF3-209ENST00000509330 IGHV1-24A0A0C4DH33 117 aa11.19□□□□□ -0.62
PHF3-209ENST00000509330 GATA1P15976 413 aaPredicted RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms