RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 LINC00477Q96M19 166 aa10.76□□□□□ -0.69
CXCL1-202ENST00000509101 IGHV1OR15-1A0A075B7D0 117 aa10.75□□□□□ -0.69
CXCL1-202ENST00000509101 IGKV2-40A0A087WW87 121 aaPredicted RBP10.75□□□□□ -0.69
CXCL1-202ENST00000509101 IGKV2D-40P01614 121 aaPredicted RBP10.75□□□□□ -0.69
CXCL1-202ENST00000509101 GYPEP15421 78 aa10.75□□□□□ -0.69
CXCL1-202ENST00000509101 CRISP2P16562 243 aa10.75□□□□□ -0.69
CXCL1-202ENST00000509101 BCAP31P51572 246 aa10.75□□□□□ -0.69
CXCL1-202ENST00000509101 ZNF415Q09FC8 603 aa10.75□□□□□ -0.69
CXCL1-202ENST00000509101 NTN5Q8WTR8 489 aaPredicted RBP10.75□□□□□ -0.69
CXCL1-202ENST00000509101 PFDN5Q99471 154 aa10.75□□□□□ -0.69
CXCL1-202ENST00000509101 MRPL32Q9BYC8 188 aaKnown RBP10.75□□□□□ -0.69
CXCL1-202ENST00000509101 IGSF23A1L1A6 192 aa10.74□□□□□ -0.69
CXCL1-202ENST00000509101 LRCOL1A6NCL2 159 aa10.74□□□□□ -0.69
CXCL1-202ENST00000509101 CST7O76096 145 aa10.74□□□□□ -0.69
CXCL1-202ENST00000509101 NDUFB4O95168 129 aa10.74□□□□□ -0.69
CXCL1-202ENST00000509101 CAV2P51636 162 aa10.74□□□□□ -0.69
CXCL1-202ENST00000509101 RAB31Q13636 194 aa10.74□□□□□ -0.69
CXCL1-202ENST00000509101 EXOC3-AS1Q8N2X6 119 aa10.74□□□□□ -0.69
CXCL1-202ENST00000509101 C10orf126Q8N4M7 172 aa10.74□□□□□ -0.69
CXCL1-202ENST00000509101 ZFAND2AQ8N6M9 145 aa10.74□□□□□ -0.69
CXCL1-202ENST00000509101 ZNF479Q96JC4 524 aa10.74□□□□□ -0.69
CXCL1-202ENST00000509101 FAM30AQ9NZY2 134 aa10.74□□□□□ -0.69
CXCL1-202ENST00000509101 PRELID1Q9Y255 219 aa10.74□□□□□ -0.69
CXCL1-202ENST00000509101 HMCN2Q8NDA2 5059 aa10.74□□□□□ -0.69
CXCL1-202ENST00000509101 H0YIZ8 118 aa10.73□□□□□ -0.69
CXCL1-202ENST00000509101 PYYP10082 97 aa10.73□□□□□ -0.69
CXCL1-202ENST00000509101 H2BFSP57053 126 aa10.73□□□□□ -0.69
CXCL1-202ENST00000509101 TMEM78Q5T7P6 136 aa10.73□□□□□ -0.69
CXCL1-202ENST00000509101 C9orf47Q6ZRZ4 202 aa10.73□□□□□ -0.69
CXCL1-202ENST00000509101 TMEM252Q8N6L7 170 aa10.73□□□□□ -0.69
CXCL1-202ENST00000509101 BLNKQ8WV28 456 aa10.73□□□□□ -0.69
CXCL1-202ENST00000509101 LYRM2Q9NU23 88 aaPredicted RBP10.73□□□□□ -0.69
CXCL1-202ENST00000509101 TIMM9Q9Y5J7 89 aa10.73□□□□□ -0.69
CXCL1-202ENST00000509101 PVALBP20472 110 aaPredicted RBP10.72□□□□□ -0.69
CXCL1-202ENST00000509101 LRRC37A5PQ49AS3 106 aa10.72□□□□□ -0.69
CXCL1-202ENST00000509101 Q8N814 137 aa10.72□□□□□ -0.69
CXCL1-202ENST00000509101 NMES1Q9C002 83 aa10.72□□□□□ -0.69
CXCL1-202ENST00000509101 OR5AC2Q9NZP5 309 aa10.72□□□□□ -0.69
CXCL1-202ENST00000509101 UBE2L5PA0A1B0GUS4 154 aa10.71□□□□□ -0.69
CXCL1-202ENST00000509101 KRTAP29-1A8MX34 341 aaPredicted RBP10.71□□□□□ -0.69
CXCL1-202ENST00000509101 SSNA1O43805 119 aa10.71□□□□□ -0.69
CXCL1-202ENST00000509101 ORM1P02763 201 aa10.71□□□□□ -0.69
CXCL1-202ENST00000509101 NMBP08949 121 aa10.71□□□□□ -0.69
CXCL1-202ENST00000509101 HIST1H1EP10412 219 aaKnown RBP10.71□□□□□ -0.69
CXCL1-202ENST00000509101 PDE6HQ13956 83 aa10.71□□□□□ -0.69
CXCL1-202ENST00000509101 FAM122CQ6P4D5 195 aa10.71□□□□□ -0.69
CXCL1-202ENST00000509101 OR10G4Q8NGN3 311 aa10.71□□□□□ -0.69
CXCL1-202ENST00000509101 Q8TAT8 98 aa10.71□□□□□ -0.69
CXCL1-202ENST00000509101 TXNDC17Q9BRA2 123 aa10.71□□□□□ -0.69
CXCL1-202ENST00000509101 AAMDCQ9H7C9 122 aa10.71□□□□□ -0.69
CXCL1-202ENST00000509101 SLC39A9Q9NUM3 307 aa10.71□□□□□ -0.69
CXCL1-202ENST00000509101 UQCC1Q9NVA1 299 aa10.71□□□□□ -0.69
CXCL1-202ENST00000509101 TMEM14CQ9P0S9 112 aa10.71□□□□□ -0.69
CXCL1-202ENST00000509101 WDR83OSQ9Y284 106 aa10.71□□□□□ -0.69
CXCL1-202ENST00000509101 LRP1Q07954 4544 aaKnown RBP10.7□□□□□ -0.7
CXCL1-202ENST00000509101 PLA2G1BP04054 148 aaKnown RBP10.7□□□□□ -0.7
CXCL1-202ENST00000509101 SULT1A1P50225 295 aa10.7□□□□□ -0.7
CXCL1-202ENST00000509101 BAXQ07812 192 aa10.7□□□□□ -0.7
CXCL1-202ENST00000509101 MUC21Q5SSG8 566 aa10.7□□□□□ -0.7
CXCL1-202ENST00000509101 IQCF2Q8IXL9 164 aa10.7□□□□□ -0.7
CXCL1-202ENST00000509101 Q9HAA7 133 aa10.7□□□□□ -0.7
CXCL1-202ENST00000509101 ZNF492Q9P255 531 aa10.7□□□□□ -0.7
CXCL1-202ENST00000509101 ALG5Q9Y673 324 aa10.7□□□□□ -0.7
CXCL1-202ENST00000509101 UBR4Q5T4S7 5183 aa10.7□□□□□ -0.7
CXCL1-202ENST00000509101 LOC100131303A0A0U1RQF7 123 aa10.69□□□□□ -0.7
CXCL1-202ENST00000509101 C9JCJ5 164 aa10.69□□□□□ -0.7
CXCL1-202ENST00000509101 PTTG1O95997 202 aa10.69□□□□□ -0.7
CXCL1-202ENST00000509101 RPL29P47914 159 aaKnown RBP10.69□□□□□ -0.7
CXCL1-202ENST00000509101 NHLH2Q02577 135 aa10.69□□□□□ -0.7
CXCL1-202ENST00000509101 VWC2Q2TAL6 325 aa10.69□□□□□ -0.7
CXCL1-202ENST00000509101 LINC00528Q8N1L1 170 aa10.69□□□□□ -0.7
CXCL1-202ENST00000509101 IGHV3-38A0A0C4DH36 116 aa10.68□□□□□ -0.7
CXCL1-202ENST00000509101 PPP1R1CQ8WVI7 109 aa10.68□□□□□ -0.7
CXCL1-202ENST00000509101 S100A11P31949 105 aa10.67□□□□□ -0.7
CXCL1-202ENST00000509101 PPT1P50897 306 aa10.67□□□□□ -0.7
CXCL1-202ENST00000509101 ZNF138P52744 262 aa10.67□□□□□ -0.7
CXCL1-202ENST00000509101 CYCSP99999 105 aaKnown RBP10.67□□□□□ -0.7
CXCL1-202ENST00000509101 TMEM183BQ1AE95 376 aa10.67□□□□□ -0.7
CXCL1-202ENST00000509101 GCSAMLQ5JQS6 135 aa10.67□□□□□ -0.7
CXCL1-202ENST00000509101 STX12Q86Y82 276 aa10.67□□□□□ -0.7
CXCL1-202ENST00000509101 TMEM183AQ8IXX5 376 aa10.67□□□□□ -0.7
CXCL1-202ENST00000509101 NHLRC2Q8NBF2 726 aa10.67□□□□□ -0.7
CXCL1-202ENST00000509101 SLC25A31Q9H0C2 315 aa10.67□□□□□ -0.7
CXCL1-202ENST00000509101 IBA57-AS1B1ANH7 110 aa10.66□□□□□ -0.7
CXCL1-202ENST00000509101 MPC2O95563 127 aa10.66□□□□□ -0.7
CXCL1-202ENST00000509101 FGF7P21781 194 aa10.66□□□□□ -0.7
CXCL1-202ENST00000509101 LINC01556Q5JQF7 62 aa10.66□□□□□ -0.7
CXCL1-202ENST00000509101 DEFB104AQ8WTQ1 72 aa10.66□□□□□ -0.7
CXCL1-202ENST00000509101 RASL10AQ92737 203 aa10.66□□□□□ -0.7
CXCL1-202ENST00000509101 SLC25A2Q9BXI2 301 aa10.66□□□□□ -0.7
CXCL1-202ENST00000509101 FAT3Q8TDW7 4589 aa10.66□□□□□ -0.7
CXCL1-202ENST00000509101 TRAV4A0A0B4J268 109 aa10.65□□□□□ -0.7
CXCL1-202ENST00000509101 C1QBP02746 253 aa10.65□□□□□ -0.7
CXCL1-202ENST00000509101 HBG1P69891 147 aa10.65□□□□□ -0.7
CXCL1-202ENST00000509101 HBG2P69892 147 aa10.65□□□□□ -0.7
CXCL1-202ENST00000509101 ATP6V1FQ16864 119 aa10.65□□□□□ -0.7
CXCL1-202ENST00000509101 SYT8Q8NBV8 401 aa10.65□□□□□ -0.7
CXCL1-202ENST00000509101 OR4C5Q8NGB2 326 aa10.65□□□□□ -0.7
CXCL1-202ENST00000509101 OR5C1Q8NGR4 320 aa10.65□□□□□ -0.7
CXCL1-202ENST00000509101 SPXQ9BT56 116 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms