RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 TM4SF20Q53R12 229 aa7.01□□□□□ -1.29
HTT-205ENST00000509043 Q71RC1 249 aaPredicted RBP7.01□□□□□ -1.29
HTT-205ENST00000509043 MRPL52Q86TS9 123 aaKnown RBP7.01□□□□□ -1.29
HTT-205ENST00000509043 OR8A1Q8NGG7 326 aa7.01□□□□□ -1.29
HTT-205ENST00000509043 C20orf144Q9BQM9 153 aa7.01□□□□□ -1.29
HTT-205ENST00000509043 AP5S1Q9NUS5 200 aa7.01□□□□□ -1.29
HTT-205ENST00000509043 HSPB8Q9UJY1 196 aa7.01□□□□□ -1.29
HTT-205ENST00000509043 ANKRD17O75179 2603 aaKnown RBP7.01□□□□□ -1.29
HTT-205ENST00000509043 TRAV2A0A0B4J234 112 aa7□□□□□ -1.29
HTT-205ENST00000509043 TMEM213A2RRL7 107 aa7□□□□□ -1.29
HTT-205ENST00000509043 CRXO43186 299 aaPredicted RBP7□□□□□ -1.29
HTT-205ENST00000509043 RPLP1P05386 114 aaKnown RBP7□□□□□ -1.29
HTT-205ENST00000509043 C3orf79P0CE67 100 aa7□□□□□ -1.29
HTT-205ENST00000509043 BTF3P20290 206 aaKnown RBP7□□□□□ -1.29
HTT-205ENST00000509043 SNRPD3P62318 126 aaKnown RBP7□□□□□ -1.29
HTT-205ENST00000509043 TMEM95Q3KNT9 176 aa7□□□□□ -1.29
HTT-205ENST00000509043 FA2HQ7L5A8 372 aa7□□□□□ -1.29
HTT-205ENST00000509043 C20orf173Q96LM9 149 aa7□□□□□ -1.29
HTT-205ENST00000509043 NDUFAF3Q9BU61 184 aa7□□□□□ -1.29
HTT-205ENST00000509043 VAMP8Q9BV40 100 aa7□□□□□ -1.29
HTT-205ENST00000509043 FAM208BQ5VWN6 2430 aa7□□□□□ -1.29
HTT-205ENST00000509043 ASH1LQ9NR48 2969 aaKnown RBP6.99□□□□□ -1.29
HTT-205ENST00000509043 IGKV3D-20A0A0C4DH25 116 aa6.99□□□□□ -1.29
HTT-205ENST00000509043 LEPROTL1O95214 131 aa6.99□□□□□ -1.29
HTT-205ENST00000509043 CKS2P33552 79 aa6.99□□□□□ -1.29
HTT-205ENST00000509043 LEPP41159 167 aa6.99□□□□□ -1.29
HTT-205ENST00000509043 ZNF575Q86XF7 245 aa6.99□□□□□ -1.29
HTT-205ENST00000509043 FAM19A2Q8N3H0 131 aa6.99□□□□□ -1.29
HTT-205ENST00000509043 ZFAND2AQ8N6M9 145 aa6.99□□□□□ -1.29
HTT-205ENST00000509043 KLHDC1Q8N7A1 406 aa6.99□□□□□ -1.29
HTT-205ENST00000509043 OR10AG1Q8NH19 301 aa6.99□□□□□ -1.29
HTT-205ENST00000509043 PRSS3P2Q8NHM4 247 aa6.99□□□□□ -1.29
HTT-205ENST00000509043 DCANP1Q8TF63 244 aa6.99□□□□□ -1.29
HTT-205ENST00000509043 URB1-AS1Q96HZ7 61 aa6.99□□□□□ -1.29
HTT-205ENST00000509043 PRELID3AQ96N28 172 aa6.99□□□□□ -1.29
HTT-205ENST00000509043 TMEM70Q9BUB7 260 aa6.99□□□□□ -1.29
HTT-205ENST00000509043 CR1P17927 2039 aa6.99□□□□□ -1.29
HTT-205ENST00000509043 EPG5Q9HCE0 2579 aa6.98□□□□□ -1.29
HTT-205ENST00000509043 IGHV1-24A0A0C4DH33 117 aa6.98□□□□□ -1.29
HTT-205ENST00000509043 C2orf70A6NJV1 201 aa6.98□□□□□ -1.29
HTT-205ENST00000509043 D6R8Y8 96 aa6.98□□□□□ -1.29
HTT-205ENST00000509043 CD5LO43866 347 aa6.98□□□□□ -1.29
HTT-205ENST00000509043 DUSP14O95147 198 aaKnown RBP6.98□□□□□ -1.29
HTT-205ENST00000509043 HOXD3P31249 432 aaPredicted RBP6.98□□□□□ -1.29
HTT-205ENST00000509043 MRPL51Q4U2R6 128 aaKnown RBP6.98□□□□□ -1.29
HTT-205ENST00000509043 PET117Q6UWS5 81 aa6.98□□□□□ -1.29
HTT-205ENST00000509043 LCNL1Q6ZST4 164 aa6.98□□□□□ -1.29
HTT-205ENST00000509043 AMN1Q8IY45 258 aa6.98□□□□□ -1.29
HTT-205ENST00000509043 DEFB125Q8N687 156 aa6.98□□□□□ -1.29
HTT-205ENST00000509043 Q8N976 141 aa6.98□□□□□ -1.29
HTT-205ENST00000509043 C4orf3Q8WVX3 66 aa6.98□□□□□ -1.29
HTT-205ENST00000509043 MS4A6AQ9H2W1 248 aa6.98□□□□□ -1.29
HTT-205ENST00000509043 PRO1933Q9H354 126 aa6.98□□□□□ -1.29
HTT-205ENST00000509043 PEMTQ9UBM1 199 aa6.98□□□□□ -1.29
HTT-205ENST00000509043 NAV2Q8IVL1 2488 aa6.98□□□□□ -1.29
HTT-205ENST00000509043 LINC01546A6NGU7 62 aa6.97□□□□□ -1.29
HTT-205ENST00000509043 PRSS47A8MTI9 375 aa6.97□□□□□ -1.29
HTT-205ENST00000509043 KLLNB2CW77 178 aa6.97□□□□□ -1.29
HTT-205ENST00000509043 LINC01619G3V211 115 aa6.97□□□□□ -1.29
HTT-205ENST00000509043 K7EQG2 157 aa6.97□□□□□ -1.29
HTT-205ENST00000509043 TCF21O43680 179 aa6.97□□□□□ -1.29
HTT-205ENST00000509043 TSPOP30536 169 aa6.97□□□□□ -1.29
HTT-205ENST00000509043 FBN2P35556 2912 aa6.97□□□□□ -1.29
HTT-205ENST00000509043 ASIPP42127 132 aa6.97□□□□□ -1.29
HTT-205ENST00000509043 SPATA12Q7Z6I5 190 aa6.97□□□□□ -1.29
HTT-205ENST00000509043 WFDC11Q8NEX6 87 aa6.97□□□□□ -1.29
HTT-205ENST00000509043 MRAP2Q96G30 205 aa6.97□□□□□ -1.29
HTT-205ENST00000509043 MAP1LC3CQ9BXW4 147 aa6.97□□□□□ -1.29
HTT-205ENST00000509043 MAP1LC3AQ9H492 121 aa6.97□□□□□ -1.29
HTT-205ENST00000509043 NXT2Q9NPJ8 142 aaKnown RBP6.97□□□□□ -1.29
HTT-205ENST00000509043 TMEM160Q9NX00 188 aa6.97□□□□□ -1.29
HTT-205ENST00000509043 USP9YO00507 2555 aaPredicted RBP6.96□□□□□ -1.29
HTT-205ENST00000509043 IGHV4OR15-8A0A075B7B6 117 aa6.96□□□□□ -1.3
HTT-205ENST00000509043 A0A087WW49 117 aa6.96□□□□□ -1.3
HTT-205ENST00000509043 PPP1R17O96001 155 aa6.96□□□□□ -1.3
HTT-205ENST00000509043 SYNJ2BPP57105 145 aa6.96□□□□□ -1.3
HTT-205ENST00000509043 SPANXN1Q5VSR9 72 aa6.96□□□□□ -1.3
HTT-205ENST00000509043 EBLN2Q6P2I7 272 aa6.96□□□□□ -1.3
HTT-205ENST00000509043 RNF185Q96GF1 192 aa6.96□□□□□ -1.3
HTT-205ENST00000509043 MIEN1Q9BRT3 115 aa6.96□□□□□ -1.3
HTT-205ENST00000509043 SIGLEC8Q9NYZ4 499 aa6.96□□□□□ -1.3
HTT-205ENST00000509043 C11orf21Q9P2W6 132 aa6.96□□□□□ -1.3
HTT-205ENST00000509043 UTP20O75691 2785 aaKnown RBP6.96□□□□□ -1.3
HTT-205ENST00000509043 TRAV9-2A0A087WT02 112 aa6.95□□□□□ -1.3
HTT-205ENST00000509043 A0A0J9YX75 114 aa6.95□□□□□ -1.3
HTT-205ENST00000509043 SYS1-DBNDD2H3BUS1 97 aa6.95□□□□□ -1.3
HTT-205ENST00000509043 S100A4P26447 101 aaKnown RBP6.95□□□□□ -1.3
HTT-205ENST00000509043 PSMG4Q5JS54 123 aa6.95□□□□□ -1.3
HTT-205ENST00000509043 C10orf99Q6UWK7 81 aa6.95□□□□□ -1.3
HTT-205ENST00000509043 FOXI2Q6ZQN5 318 aa6.95□□□□□ -1.3
HTT-205ENST00000509043 DPF1Q92782 380 aa6.95□□□□□ -1.3
HTT-205ENST00000509043 C14orf144Q96I85 54 aa6.95□□□□□ -1.3
HTT-205ENST00000509043 SCRT2Q9NQ03 307 aa6.95□□□□□ -1.3
HTT-205ENST00000509043 PTPN13Q12923 2485 aa6.95□□□□□ -1.3
HTT-205ENST00000509043 CREBBPQ92793 2442 aa6.94□□□□□ -1.3
HTT-205ENST00000509043 DNAJC9-AS1A6NH13 148 aa6.94□□□□□ -1.3
HTT-205ENST00000509043 K7EMI3 77 aa6.94□□□□□ -1.3
HTT-205ENST00000509043 NXPH4O95158 308 aa6.94□□□□□ -1.3
HTT-205ENST00000509043 HBDP02042 147 aa6.94□□□□□ -1.3
HTT-205ENST00000509043 CSN3P07498 182 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms