RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 LSM2Q9Y333 95 aaKnown RBP1.29□□□□□ -2.2
DEPDC1B-204ENST00000509006 RGS12O14924 1447 aa1.29□□□□□ -2.2
DEPDC1B-204ENST00000509006 CNTLNQ9NXG0 1405 aa1.29□□□□□ -2.2
DEPDC1B-204ENST00000509006 CFTRP13569 1480 aa1.29□□□□□ -2.2
DEPDC1B-204ENST00000509006 FRMPD1Q5SYB0 1578 aa1.29□□□□□ -2.2
DEPDC1B-204ENST00000509006 WDR90Q96KV7 1748 aa1.29□□□□□ -2.2
DEPDC1B-204ENST00000509006 SHANK3Q9BYB0 1731 aa1.29□□□□□ -2.2
DEPDC1B-204ENST00000509006 CCDC88AQ3V6T2 1871 aa1.29□□□□□ -2.2
DEPDC1B-204ENST00000509006 MYO16Q9Y6X6 1858 aa1.29□□□□□ -2.2
DEPDC1B-204ENST00000509006 SCN8AQ9UQD0 1980 aa1.28□□□□□ -2.2
DEPDC1B-204ENST00000509006 TRAV30A0A087WSZ9 112 aa1.28□□□□□ -2.2
DEPDC1B-204ENST00000509006 TRGV4A0A0C4DH28 118 aa1.28□□□□□ -2.2
DEPDC1B-204ENST00000509006 LOC107984156A0A0G2JMH3 177 aa1.28□□□□□ -2.2
DEPDC1B-204ENST00000509006 A6NIN4 97 aa1.28□□□□□ -2.2
DEPDC1B-204ENST00000509006 M0R143 59 aa1.28□□□□□ -2.2
DEPDC1B-204ENST00000509006 GEMIN2O14893 280 aaKnown RBP1.28□□□□□ -2.2
DEPDC1B-204ENST00000509006 IGLV1-51P01701 117 aa1.28□□□□□ -2.2
DEPDC1B-204ENST00000509006 RNASE2P10153 161 aaKnown RBP1.28□□□□□ -2.2
DEPDC1B-204ENST00000509006 COX7CP15954 63 aa1.28□□□□□ -2.2
DEPDC1B-204ENST00000509006 FAM74A1Q5RGS3 127 aa1.28□□□□□ -2.2
DEPDC1B-204ENST00000509006 RPL7L1Q6DKI1 246 aaKnown RBP1.28□□□□□ -2.2
DEPDC1B-204ENST00000509006 MRPL54Q6P161 138 aaKnown RBP1.28□□□□□ -2.2
DEPDC1B-204ENST00000509006 ARL17AQ8IVW1 177 aa1.28□□□□□ -2.2
DEPDC1B-204ENST00000509006 CLECL1Q8IZS7 167 aa1.28□□□□□ -2.2
DEPDC1B-204ENST00000509006 DYNLRB2Q8TF09 96 aa1.28□□□□□ -2.2
DEPDC1B-204ENST00000509006 PPDPFLQ8WWR9 84 aa1.28□□□□□ -2.2
DEPDC1B-204ENST00000509006 SEC11CQ9BY50 192 aa1.28□□□□□ -2.2
DEPDC1B-204ENST00000509006 AGPAT4-IT1Q9H0P7 198 aa1.28□□□□□ -2.2
DEPDC1B-204ENST00000509006 ORMDL1Q9P0S3 153 aa1.28□□□□□ -2.2
DEPDC1B-204ENST00000509006 CRCT1Q9UGL9 99 aa1.28□□□□□ -2.2
DEPDC1B-204ENST00000509006 SERP1Q9Y6X1 66 aa1.28□□□□□ -2.2
DEPDC1B-204ENST00000509006 DAPK1P53355 1430 aa1.28□□□□□ -2.2
DEPDC1B-204ENST00000509006 MYOM2P54296 1465 aa1.28□□□□□ -2.2
DEPDC1B-204ENST00000509006 MYLKQ15746 1914 aa1.28□□□□□ -2.2
DEPDC1B-204ENST00000509006 SCN9AQ15858 1988 aa1.28□□□□□ -2.2
DEPDC1B-204ENST00000509006 MYH7P12883 1935 aa1.27□□□□□ -2.21
DEPDC1B-204ENST00000509006 MYO5AQ9Y4I1 1855 aaKnown RBP1.27□□□□□ -2.21
DEPDC1B-204ENST00000509006 SYNJ1O43426 1573 aa1.27□□□□□ -2.21
DEPDC1B-204ENST00000509006 A2ML1A8K2U0 1454 aa1.27□□□□□ -2.21
DEPDC1B-204ENST00000509006 MBD5Q9P267 1494 aa1.27□□□□□ -2.21
DEPDC1B-204ENST00000509006 ERBINQ96RT1 1412 aa1.27□□□□□ -2.21
DEPDC1B-204ENST00000509006 IGKV3D-11A0A0A0MRZ8 115 aa1.27□□□□□ -2.21
DEPDC1B-204ENST00000509006 PVALEFA0A1B0GWK0 134 aa1.27□□□□□ -2.21
DEPDC1B-204ENST00000509006 C2orf70A6NJV1 201 aa1.27□□□□□ -2.21
DEPDC1B-204ENST00000509006 F8W1H4 67 aa1.27□□□□□ -2.21
DEPDC1B-204ENST00000509006 H3BRM9 83 aa1.27□□□□□ -2.21
DEPDC1B-204ENST00000509006 H3BRN7 92 aa1.27□□□□□ -2.21
DEPDC1B-204ENST00000509006 KLF7O75840 302 aaPredicted RBP1.27□□□□□ -2.21
DEPDC1B-204ENST00000509006 NDUFB6O95139 128 aa1.27□□□□□ -2.21
DEPDC1B-204ENST00000509006 IGKV1-17P01599 117 aa1.27□□□□□ -2.21
DEPDC1B-204ENST00000509006 IL5P05113 134 aa1.27□□□□□ -2.21
DEPDC1B-204ENST00000509006 POLR2JP52435 117 aaKnown RBP1.27□□□□□ -2.21
DEPDC1B-204ENST00000509006 GNG2P59768 71 aa1.27□□□□□ -2.21
DEPDC1B-204ENST00000509006 PKIAP61925 76 aa1.27□□□□□ -2.21
DEPDC1B-204ENST00000509006 Q1T7F1 81 aa1.27□□□□□ -2.21
DEPDC1B-204ENST00000509006 C1orf137Q5JT78 98 aa1.27□□□□□ -2.21
DEPDC1B-204ENST00000509006 Q6AWC8 147 aa1.27□□□□□ -2.21
DEPDC1B-204ENST00000509006 LINC00299Q6ZSB3 139 aa1.27□□□□□ -2.21
DEPDC1B-204ENST00000509006 ZNF833PQ6ZTB9 187 aa1.27□□□□□ -2.21
DEPDC1B-204ENST00000509006 SLC25A26Q70HW3 274 aa1.27□□□□□ -2.21
DEPDC1B-204ENST00000509006 LINC00269Q8N2A0 174 aa1.27□□□□□ -2.21
DEPDC1B-204ENST00000509006 AQP10Q96PS8 301 aa1.27□□□□□ -2.21
DEPDC1B-204ENST00000509006 MRPL57Q9BQC6 102 aaKnown RBP1.27□□□□□ -2.21
DEPDC1B-204ENST00000509006 TIMM21Q9BVV7 248 aa1.27□□□□□ -2.21
DEPDC1B-204ENST00000509006 AP4S1Q9Y587 144 aa1.27□□□□□ -2.21
DEPDC1B-204ENST00000509006 CHCHD2Q9Y6H1 151 aaPredicted RBP1.27□□□□□ -2.21
DEPDC1B-204ENST00000509006 MALRD1Q5VYJ5 2156 aa1.27□□□□□ -2.21
DEPDC1B-204ENST00000509006 DISP1Q96F81 1524 aa1.26□□□□□ -2.21
DEPDC1B-204ENST00000509006 IGKV1D-17A0A075B6S4 117 aa1.26□□□□□ -2.21
DEPDC1B-204ENST00000509006 IGLV3-32A0A0A0MS00 114 aa1.26□□□□□ -2.21
DEPDC1B-204ENST00000509006 A0A1W2PNN7 141 aa1.26□□□□□ -2.21
DEPDC1B-204ENST00000509006 A0A1W2PRS3 328 aa1.26□□□□□ -2.21
DEPDC1B-204ENST00000509006 FAM24AA6NFZ4 105 aa1.26□□□□□ -2.21
DEPDC1B-204ENST00000509006 MCRIP1C9JLW8 97 aa1.26□□□□□ -2.21
DEPDC1B-204ENST00000509006 C5orf67F2Z3F1 127 aa1.26□□□□□ -2.21
DEPDC1B-204ENST00000509006 IFITM1P13164 125 aa1.26□□□□□ -2.21
DEPDC1B-204ENST00000509006 ADCYAP1P18509 176 aa1.26□□□□□ -2.21
DEPDC1B-204ENST00000509006 HSD52Q0P140 79 aa1.26□□□□□ -2.21
DEPDC1B-204ENST00000509006 MIR22HGQ0VDD5 57 aa1.26□□□□□ -2.21
DEPDC1B-204ENST00000509006 UNQ5815/PRO19632Q6UWF5 114 aa1.26□□□□□ -2.21
DEPDC1B-204ENST00000509006 FOXI2Q6ZQN5 318 aa1.26□□□□□ -2.21
DEPDC1B-204ENST00000509006 NDUFA11Q86Y39 141 aa1.26□□□□□ -2.21
DEPDC1B-204ENST00000509006 C4orf33Q8N1A6 199 aa1.26□□□□□ -2.21
DEPDC1B-204ENST00000509006 Q8N2B8 174 aa1.26□□□□□ -2.21
DEPDC1B-204ENST00000509006 C5orf17Q8NAS9 161 aa1.26□□□□□ -2.21
DEPDC1B-204ENST00000509006 TMEM242Q9NWH2 141 aa1.26□□□□□ -2.21
DEPDC1B-204ENST00000509006 KLK9Q9UKQ9 250 aa1.26□□□□□ -2.21
DEPDC1B-204ENST00000509006 HEATR5AQ86XA9 2040 aa1.26□□□□□ -2.21
DEPDC1B-204ENST00000509006 TRPM6Q9BX84 2022 aa1.26□□□□□ -2.21
DEPDC1B-204ENST00000509006 PTPRBP23467 1997 aa1.26□□□□□ -2.21
DEPDC1B-204ENST00000509006 CPAMD8Q8IZJ3 1885 aa1.26□□□□□ -2.21
DEPDC1B-204ENST00000509006 POLEQ07864 2286 aa1.26□□□□□ -2.21
DEPDC1B-204ENST00000509006 SEC16AO15027 2179 aa1.25□□□□□ -2.21
DEPDC1B-204ENST00000509006 NSD3Q9BZ95 1437 aa1.25□□□□□ -2.21
DEPDC1B-204ENST00000509006 MYH9P35579 1960 aaKnown RBP1.25□□□□□ -2.21
DEPDC1B-204ENST00000509006 A0A0G2JQZ4 141 aa1.25□□□□□ -2.21
DEPDC1B-204ENST00000509006 IGHV3-33P01772 117 aa1.25□□□□□ -2.21
DEPDC1B-204ENST00000509006 ATP5EP56381 51 aaPredicted RBP1.25□□□□□ -2.21
DEPDC1B-204ENST00000509006 NPC2P61916 151 aa1.25□□□□□ -2.21
DEPDC1B-204ENST00000509006 RHOHQ15669 191 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms