RNA–Protein interactions for RNA: ENST00000508895.5

SNCA-211, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SNCA, Length 905 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-211ENST00000508895 TRBV7-9A0A0J9YWB2 115 aa6.18□□□□□ -1.42
SNCA-211ENST00000508895 SERTM2A0A1B0GWG4 89 aa6.18□□□□□ -1.42
SNCA-211ENST00000508895 C7orf71A4D174 169 aa6.18□□□□□ -1.42
SNCA-211ENST00000508895 NUPR2A6NF83 97 aa6.18□□□□□ -1.42
SNCA-211ENST00000508895 PEX7O00628 323 aa6.18□□□□□ -1.42
SNCA-211ENST00000508895 LY6G6CO95867 125 aa6.18□□□□□ -1.42
SNCA-211ENST00000508895 Q6ZQT7 251 aa6.18□□□□□ -1.42
SNCA-211ENST00000508895 Q86TA4 180 aa6.18□□□□□ -1.42
SNCA-211ENST00000508895 TMEM256Q8N2U0 113 aa6.18□□□□□ -1.42
SNCA-211ENST00000508895 TMEM75Q8N9X5 138 aa6.18□□□□□ -1.42
SNCA-211ENST00000508895 TVP23CQ96ET8 276 aa6.18□□□□□ -1.42
SNCA-211ENST00000508895 SGK494Q96LW2 274 aa6.18□□□□□ -1.42
SNCA-211ENST00000508895 EPDR1Q9UM22 224 aa6.18□□□□□ -1.42
SNCA-211ENST00000508895 TRAV12-3A0A0B4J271 114 aa6.17□□□□□ -1.42
SNCA-211ENST00000508895 SCO2A0A1W2PP80 73 aa6.17□□□□□ -1.42
SNCA-211ENST00000508895 PLAC8L1A1L4L8 177 aa6.17□□□□□ -1.42
SNCA-211ENST00000508895 ZNF705GA8MUZ8 300 aaPredicted RBP6.17□□□□□ -1.42
SNCA-211ENST00000508895 F6UZH7 168 aa6.17□□□□□ -1.42
SNCA-211ENST00000508895 IFNA7P01567 189 aa6.17□□□□□ -1.42
SNCA-211ENST00000508895 HBE1P02100 147 aa6.17□□□□□ -1.42
SNCA-211ENST00000508895 AZU1P20160 251 aa6.17□□□□□ -1.42
SNCA-211ENST00000508895 CST9LP1Q5W188 147 aa6.17□□□□□ -1.42
SNCA-211ENST00000508895 LYPD6BQ8NI32 183 aa6.17□□□□□ -1.42
SNCA-211ENST00000508895 LINC00479Q96M42 142 aa6.17□□□□□ -1.42
SNCA-211ENST00000508895 C20orf144Q9BQM9 153 aa6.17□□□□□ -1.42
SNCA-211ENST00000508895 TCEAL7Q9BRU2 100 aa6.17□□□□□ -1.42
SNCA-211ENST00000508895 TMEM208Q9BTX3 173 aa6.17□□□□□ -1.42
SNCA-211ENST00000508895 NKX6-2Q9C056 277 aaPredicted RBP6.17□□□□□ -1.42
SNCA-211ENST00000508895 MANBALQ9NQG1 85 aa6.17□□□□□ -1.42
SNCA-211ENST00000508895 GNG13Q9P2W3 67 aa6.17□□□□□ -1.42
SNCA-211ENST00000508895 LENEPQ9Y5L5 61 aa6.17□□□□□ -1.42
SNCA-211ENST00000508895 FAT2Q9NYQ8 4349 aa6.16□□□□□ -1.42
SNCA-211ENST00000508895 TRAV34A0A0B4J273 112 aa6.16□□□□□ -1.42
SNCA-211ENST00000508895 LOC102723971A0A1B0GUV8 181 aa6.16□□□□□ -1.42
SNCA-211ENST00000508895 SMIM9A6NGZ8 99 aa6.16□□□□□ -1.42
SNCA-211ENST00000508895 C11orf94C9JXX5 98 aa6.16□□□□□ -1.42
SNCA-211ENST00000508895 H7BYZ3 331 aa6.16□□□□□ -1.42
SNCA-211ENST00000508895 ZNF324O75467 553 aaPredicted RBP6.16□□□□□ -1.42
SNCA-211ENST00000508895 GPX1P07203 203 aa6.16□□□□□ -1.42
SNCA-211ENST00000508895 NMBP08949 121 aa6.16□□□□□ -1.42
SNCA-211ENST00000508895 BCL2P10415 239 aa6.16□□□□□ -1.42
SNCA-211ENST00000508895 PPT1P50897 306 aa6.16□□□□□ -1.42
SNCA-211ENST00000508895 EMP1P54849 157 aa6.16□□□□□ -1.42
SNCA-211ENST00000508895 FLI1Q01543 452 aaPredicted RBP6.16□□□□□ -1.42
SNCA-211ENST00000508895 Q6AWC8 147 aa6.16□□□□□ -1.42
SNCA-211ENST00000508895 C2CD4CQ8TF44 421 aa6.16□□□□□ -1.42
SNCA-211ENST00000508895 HIST1H2BAQ96A08 127 aa6.16□□□□□ -1.42
SNCA-211ENST00000508895 C8orf49Q96NF6 230 aa6.16□□□□□ -1.42
SNCA-211ENST00000508895 PSG8Q9UQ74 426 aa6.16□□□□□ -1.42
SNCA-211ENST00000508895 DNAH2Q9P225 4427 aa6.15□□□□□ -1.42
SNCA-211ENST00000508895 DNAH17Q9UFH2 4485 aa6.15□□□□□ -1.42
SNCA-211ENST00000508895 IGLL5B9A064 214 aa6.15□□□□□ -1.42
SNCA-211ENST00000508895 K7EQM0 130 aa6.15□□□□□ -1.42
SNCA-211ENST00000508895 RNASE4P34096 147 aaKnown RBP6.15□□□□□ -1.42
SNCA-211ENST00000508895 AKR1C3P42330 323 aa6.15□□□□□ -1.42
SNCA-211ENST00000508895 TAS2R60P59551 318 aa6.15□□□□□ -1.42
SNCA-211ENST00000508895 RRN3P1Q2M238 152 aa6.15□□□□□ -1.42
SNCA-211ENST00000508895 TEX261Q6UWH6 196 aa6.15□□□□□ -1.42
SNCA-211ENST00000508895 PRNTQ86SH4 94 aa6.15□□□□□ -1.42
SNCA-211ENST00000508895 RNASE8Q8TDE3 154 aaKnown RBP6.15□□□□□ -1.42
SNCA-211ENST00000508895 TMEM263Q8WUH6 116 aaKnown RBP6.15□□□□□ -1.42
SNCA-211ENST00000508895 C11orf52Q96A22 123 aa6.15□□□□□ -1.42
SNCA-211ENST00000508895 LINC01587Q99440 93 aa6.15□□□□□ -1.42
SNCA-211ENST00000508895 NIPSNAP3BQ9BS92 247 aa6.15□□□□□ -1.42
SNCA-211ENST00000508895 TREM1Q9NP99 234 aa6.15□□□□□ -1.42
SNCA-211ENST00000508895 FBLL1A6NHQ2 334 aaKnown RBP6.14□□□□□ -1.43
SNCA-211ENST00000508895 TEX46H3BTG2 121 aa6.14□□□□□ -1.43
SNCA-211ENST00000508895 IFNA1P01562 189 aa6.14□□□□□ -1.43
SNCA-211ENST00000508895 HTN1P15515 57 aa6.14□□□□□ -1.43
SNCA-211ENST00000508895 ZNF80P51504 273 aaPredicted RBP6.14□□□□□ -1.43
SNCA-211ENST00000508895 BLOC1S1P78537 153 aa6.14□□□□□ -1.43
SNCA-211ENST00000508895 MEF2BQ02080 365 aaPredicted RBP6.14□□□□□ -1.43
SNCA-211ENST00000508895 FAM222AQ5U5X8 452 aa6.14□□□□□ -1.43
SNCA-211ENST00000508895 C11orf72Q8NBR9 251 aa6.14□□□□□ -1.43
SNCA-211ENST00000508895 ZNF680Q8NEM1 530 aa6.14□□□□□ -1.43
SNCA-211ENST00000508895 PCNPQ8WW12 178 aaKnown RBP6.14□□□□□ -1.43
SNCA-211ENST00000508895 C16orf74Q96GX8 76 aa6.14□□□□□ -1.43
SNCA-211ENST00000508895 FMC1Q96HJ9 113 aa6.14□□□□□ -1.43
SNCA-211ENST00000508895 PYGO2Q9BRQ0 406 aa6.14□□□□□ -1.43
SNCA-211ENST00000508895 LINC00467Q9BRT7 94 aa6.14□□□□□ -1.43
SNCA-211ENST00000508895 NDFIP1Q9BT67 221 aa6.14□□□□□ -1.43
SNCA-211ENST00000508895 DERL1Q9BUN8 251 aa6.14□□□□□ -1.43
SNCA-211ENST00000508895 DKK2Q9UBU2 259 aa6.14□□□□□ -1.43
SNCA-211ENST00000508895 KLF12Q9Y4X4 402 aa6.14□□□□□ -1.43
SNCA-211ENST00000508895 IGHV4-4A0A075B6R2 117 aa6.13□□□□□ -1.43
SNCA-211ENST00000508895 TRBV6-1A0A0K0K1D8 114 aa6.13□□□□□ -1.43
SNCA-211ENST00000508895 TMEM189A5PLL7 270 aa6.13□□□□□ -1.43
SNCA-211ENST00000508895 GCGP01275 180 aa6.13□□□□□ -1.43
SNCA-211ENST00000508895 LTAP01374 205 aa6.13□□□□□ -1.43
SNCA-211ENST00000508895 UBE2G1P62253 170 aa6.13□□□□□ -1.43
SNCA-211ENST00000508895 TMEM183BQ1AE95 376 aa6.13□□□□□ -1.43
SNCA-211ENST00000508895 MUC21Q5SSG8 566 aa6.13□□□□□ -1.43
SNCA-211ENST00000508895 ZC2HC1AQ96GY0 325 aa6.13□□□□□ -1.43
SNCA-211ENST00000508895 C11orf21Q9P2W6 132 aa6.13□□□□□ -1.43
SNCA-211ENST00000508895 TP53TG3Q9ULZ0 132 aa6.13□□□□□ -1.43
SNCA-211ENST00000508895 KLK5Q9Y337 293 aaPredicted RBP6.13□□□□□ -1.43
SNCA-211ENST00000508895 IGHV1OR15-1A0A075B7D0 117 aa6.12□□□□□ -1.43
SNCA-211ENST00000508895 DEFB131BA0A096LNP1 70 aa6.12□□□□□ -1.43
SNCA-211ENST00000508895 TRAV21A0A0B4J279 112 aa6.12□□□□□ -1.43
SNCA-211ENST00000508895 RGS13O14921 159 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms