RNA–Protein interactions for RNA: ENST00000508625.1

PDS5A-208, Transcript of PDS5 cohesin associated factor A, humanhuman

TSL 3

Gene PDS5A, Length 351 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5A-208ENST00000508625 NDUFA11Q86Y39 141 aa-0.67□□□□□ -2.52
PDS5A-208ENST00000508625 TRAPPC5Q8IUR0 188 aa-0.67□□□□□ -2.52
PDS5A-208ENST00000508625 TMEM86BQ8N661 226 aa-0.67□□□□□ -2.52
PDS5A-208ENST00000508625 TMEM229BQ8NBD8 167 aa-0.67□□□□□ -2.52
PDS5A-208ENST00000508625 OR8J3Q8NGG0 315 aa-0.67□□□□□ -2.52
PDS5A-208ENST00000508625 OR5AK2Q8NH90 309 aa-0.67□□□□□ -2.52
PDS5A-208ENST00000508625 DNAJB3Q8WWF6 145 aa-0.67□□□□□ -2.52
PDS5A-208ENST00000508625 TMEM141Q96I45 108 aa-0.67□□□□□ -2.52
PDS5A-208ENST00000508625 OR51I1Q9H343 314 aa-0.67□□□□□ -2.52
PDS5A-208ENST00000508625 UCK1Q9HA47 277 aa-0.67□□□□□ -2.52
PDS5A-208ENST00000508625 PLEKHJ1Q9NW61 149 aa-0.67□□□□□ -2.52
PDS5A-208ENST00000508625 CMTM6Q9NX76 183 aa-0.67□□□□□ -2.52
PDS5A-208ENST00000508625 USE1Q9NZ43 259 aa-0.67□□□□□ -2.52
PDS5A-208ENST00000508625 TPRKBQ9Y3C4 175 aa-0.67□□□□□ -2.52
PDS5A-208ENST00000508625 PIK3C2GO75747 1445 aa-0.67□□□□□ -2.52
PDS5A-208ENST00000508625 MYH10P35580 1976 aa-0.67□□□□□ -2.52
PDS5A-208ENST00000508625 ESPL1Q14674 2120 aa-0.67□□□□□ -2.52
PDS5A-208ENST00000508625 ZCCHC6Q5VYS8 1495 aaKnown RBP-0.67□□□□□ -2.52
PDS5A-208ENST00000508625 ZNF142P52746 1687 aaPredicted RBP-0.68□□□□□ -2.52
PDS5A-208ENST00000508625 USP54Q70EL1 1684 aa-0.68□□□□□ -2.52
PDS5A-208ENST00000508625 CHD8Q9HCK8 2581 aa-0.68□□□□□ -2.52
PDS5A-208ENST00000508625 TRAV2A0A0B4J234 112 aa-0.68□□□□□ -2.52
PDS5A-208ENST00000508625 TRBV10-1A0A0K0K1A3 114 aa-0.68□□□□□ -2.52
PDS5A-208ENST00000508625 EVPLLA8MZ36 301 aa-0.68□□□□□ -2.52
PDS5A-208ENST00000508625 APOC4-APOC2K7ER74 178 aa-0.68□□□□□ -2.52
PDS5A-208ENST00000508625 TMEM256-PLSCR3K7ERE1 68 aa-0.68□□□□□ -2.52
PDS5A-208ENST00000508625 OR2H2O95918 312 aa-0.68□□□□□ -2.52
PDS5A-208ENST00000508625 TNFP01375 233 aa-0.68□□□□□ -2.52
PDS5A-208ENST00000508625 IFNA7P01567 189 aa-0.68□□□□□ -2.52
PDS5A-208ENST00000508625 TRACP01848 142 aa-0.68□□□□□ -2.52
PDS5A-208ENST00000508625 MT1AP04731 61 aa-0.68□□□□□ -2.52
PDS5A-208ENST00000508625 CCKP06307 115 aa-0.68□□□□□ -2.52
PDS5A-208ENST00000508625 SAA1P0DJI8 122 aaPredicted RBP-0.68□□□□□ -2.52
PDS5A-208ENST00000508625 PTPRGP23470 1445 aa-0.68□□□□□ -2.52
PDS5A-208ENST00000508625 LCN1P31025 176 aa-0.68□□□□□ -2.52
PDS5A-208ENST00000508625 NDUFA6P56556 154 aa-0.68□□□□□ -2.52
PDS5A-208ENST00000508625 ELOF1P60002 83 aaKnown RBP-0.68□□□□□ -2.52
PDS5A-208ENST00000508625 DCDP81605 110 aaKnown RBP-0.68□□□□□ -2.52
PDS5A-208ENST00000508625 SSBP1Q04837 148 aaKnown RBP-0.68□□□□□ -2.52
PDS5A-208ENST00000508625 LYPD5Q6UWN5 251 aa-0.68□□□□□ -2.52
PDS5A-208ENST00000508625 FAM9CQ8IZT9 166 aa-0.68□□□□□ -2.52
PDS5A-208ENST00000508625 FAM216BQ8N7L0 139 aa-0.68□□□□□ -2.52
PDS5A-208ENST00000508625 PPDPFLQ8WWR9 84 aa-0.68□□□□□ -2.52
PDS5A-208ENST00000508625 AP3S1Q92572 193 aa-0.68□□□□□ -2.52
PDS5A-208ENST00000508625 TEP1Q99973 2627 aaKnown RBP-0.68□□□□□ -2.52
PDS5A-208ENST00000508625 CHMP4BQ9H444 224 aaKnown RBP-0.68□□□□□ -2.52
PDS5A-208ENST00000508625 FGFR1OP2Q9NVK5 253 aa-0.68□□□□□ -2.52
PDS5A-208ENST00000508625 RABL2BQ9UNT1 228 aa-0.68□□□□□ -2.52
PDS5A-208ENST00000508625 MPC1Q9Y5U8 109 aa-0.68□□□□□ -2.52
PDS5A-208ENST00000508625 HECW1Q76N89 1606 aa-0.68□□□□□ -2.52
PDS5A-208ENST00000508625 WDR7Q9Y4E6 1490 aa-0.68□□□□□ -2.52
PDS5A-208ENST00000508625 EVC2Q86UK5 1308 aa-0.68□□□□□ -2.52
PDS5A-208ENST00000508625 SPTA1P02549 2419 aa-0.68□□□□□ -2.52
PDS5A-208ENST00000508625 KIF1BO60333 1816 aa-0.68□□□□□ -2.52
PDS5A-208ENST00000508625 C2CD3Q4AC94 2353 aa-0.69□□□□□ -2.52
PDS5A-208ENST00000508625 ZNF609O15014 1411 aa-0.69□□□□□ -2.52
PDS5A-208ENST00000508625 LOC107984640A0A0U1RRK4 108 aa-0.69□□□□□ -2.52
PDS5A-208ENST00000508625 IQCF5A8MTL0 148 aa-0.69□□□□□ -2.52
PDS5A-208ENST00000508625 ZNF670-ZNF695F2Z2N8 137 aa-0.69□□□□□ -2.52
PDS5A-208ENST00000508625 H0YJX3 145 aa-0.69□□□□□ -2.52
PDS5A-208ENST00000508625 M0QZ92 97 aa-0.69□□□□□ -2.52
PDS5A-208ENST00000508625 RER1O15258 196 aa-0.69□□□□□ -2.52
PDS5A-208ENST00000508625 CHP2O43745 196 aa-0.69□□□□□ -2.52
PDS5A-208ENST00000508625 CALUO43852 315 aaPredicted RBP-0.69□□□□□ -2.52
PDS5A-208ENST00000508625 CNIH1O95406 144 aa-0.69□□□□□ -2.52
PDS5A-208ENST00000508625 SERPINA1P01009 418 aa-0.69□□□□□ -2.52
PDS5A-208ENST00000508625 IFNA14P01570 189 aa-0.69□□□□□ -2.52
PDS5A-208ENST00000508625 IFNA6P05013 189 aa-0.69□□□□□ -2.52
PDS5A-208ENST00000508625 S100A9P06702 114 aaKnown RBP-0.69□□□□□ -2.52
PDS5A-208ENST00000508625 CRHP06850 196 aa-0.69□□□□□ -2.52
PDS5A-208ENST00000508625 TPM2P07951 284 aa-0.69□□□□□ -2.52
PDS5A-208ENST00000508625 HIST1H1EP10412 219 aaKnown RBP-0.69□□□□□ -2.52
PDS5A-208ENST00000508625 BCL2P10415 239 aa-0.69□□□□□ -2.52
PDS5A-208ENST00000508625 FABP4P15090 132 aa-0.69□□□□□ -2.52
PDS5A-208ENST00000508625 S100A3P33764 101 aa-0.69□□□□□ -2.52
PDS5A-208ENST00000508625 RPL35P42766 123 aaKnown RBP-0.69□□□□□ -2.52
PDS5A-208ENST00000508625 CAPZBP47756 277 aa-0.69□□□□□ -2.52
PDS5A-208ENST00000508625 TAS2R41P59536 307 aa-0.69□□□□□ -2.52
PDS5A-208ENST00000508625 IMPG1Q17R60 797 aa-0.69□□□□□ -2.52
PDS5A-208ENST00000508625 SLC48A1Q6P1K1 146 aa-0.69□□□□□ -2.52
PDS5A-208ENST00000508625 SPAG11AQ6PDA7 123 aa-0.69□□□□□ -2.52
PDS5A-208ENST00000508625 FAM151BQ6UXP7 276 aa-0.69□□□□□ -2.52
PDS5A-208ENST00000508625 IFT20Q8IY31 132 aa-0.69□□□□□ -2.52
PDS5A-208ENST00000508625 STAG3L4Q8TBR4 150 aa-0.69□□□□□ -2.52
PDS5A-208ENST00000508625 PPP1R2P1Q96PQ5 205 aa-0.69□□□□□ -2.52
PDS5A-208ENST00000508625 PBDC1Q9BVG4 233 aa-0.69□□□□□ -2.52
PDS5A-208ENST00000508625 TRIM4Q9C037 500 aa-0.69□□□□□ -2.52
PDS5A-208ENST00000508625 OR2H1Q9GZK4 316 aa-0.69□□□□□ -2.52
PDS5A-208ENST00000508625 AGPAT4-IT1Q9H0P7 198 aa-0.69□□□□□ -2.52
PDS5A-208ENST00000508625 LINC00472Q9H8W2 130 aa-0.69□□□□□ -2.52
PDS5A-208ENST00000508625 IMP3Q9NV31 184 aaKnown RBP-0.69□□□□□ -2.52
PDS5A-208ENST00000508625 WDR97A6NE52 1622 aa-0.69□□□□□ -2.52
PDS5A-208ENST00000508625 CSPG4Q6UVK1 2322 aa-0.69□□□□□ -2.52
PDS5A-208ENST00000508625 DNAH2Q9P225 4427 aa-0.69□□□□□ -2.52
PDS5A-208ENST00000508625 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.69□□□□□ -2.52
PDS5A-208ENST00000508625 HELZP42694 1942 aaKnown RBP-0.7□□□□□ -2.52
PDS5A-208ENST00000508625 RYR2Q92736 4967 aa-0.7□□□□□ -2.52
PDS5A-208ENST00000508625 UHRF1BP1Q6BDS2 1440 aa-0.7□□□□□ -2.52
PDS5A-208ENST00000508625 CD109Q6YHK3 1445 aa-0.7□□□□□ -2.52
PDS5A-208ENST00000508625 FGD6Q6ZV73 1430 aa-0.7□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms