RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 NDUFS6O75380 124 aaKnown RBP4.03□□□□□ -1.76
HMGB1P44-201ENST00000508597 IFNA1P01562 189 aa4.03□□□□□ -1.76
HMGB1P44-201ENST00000508597 AMBPP02760 352 aa4.03□□□□□ -1.76
HMGB1P44-201ENST00000508597 APOC4P55056 127 aa4.03□□□□□ -1.76
HMGB1P44-201ENST00000508597 RANP62826 216 aaKnown RBP4.03□□□□□ -1.76
HMGB1P44-201ENST00000508597 DEFA6Q01524 100 aa4.03□□□□□ -1.76
HMGB1P44-201ENST00000508597 PAPPA-AS1Q5QFB9 102 aa4.03□□□□□ -1.76
HMGB1P44-201ENST00000508597 LINC00322Q6ZN03 302 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P44-201ENST00000508597 FAM24BQ8N5W8 94 aa4.03□□□□□ -1.76
HMGB1P44-201ENST00000508597 DEFB125Q8N687 156 aa4.03□□□□□ -1.76
HMGB1P44-201ENST00000508597 ZNF738Q8NE65 137 aa4.03□□□□□ -1.76
HMGB1P44-201ENST00000508597 OR8A1Q8NGG7 326 aa4.03□□□□□ -1.76
HMGB1P44-201ENST00000508597 OR10J6PQ8NGY7 276 aa4.03□□□□□ -1.76
HMGB1P44-201ENST00000508597 CMTM2Q8TAZ6 248 aa4.03□□□□□ -1.76
HMGB1P44-201ENST00000508597 MRAPQ8TCY5 172 aa4.03□□□□□ -1.76
HMGB1P44-201ENST00000508597 BLNKQ8WV28 456 aa4.03□□□□□ -1.76
HMGB1P44-201ENST00000508597 RPUSD4Q96CM3 377 aaKnown RBP4.03□□□□□ -1.76
HMGB1P44-201ENST00000508597 LINC00477Q96M19 166 aa4.03□□□□□ -1.76
HMGB1P44-201ENST00000508597 ODF3Q96PU9 254 aa4.03□□□□□ -1.76
HMGB1P44-201ENST00000508597 C1QTNF4Q9BXJ3 329 aa4.03□□□□□ -1.76
HMGB1P44-201ENST00000508597 Q9H3A6 140 aa4.03□□□□□ -1.76
HMGB1P44-201ENST00000508597 SRD5A3Q9H8P0 318 aa4.03□□□□□ -1.76
HMGB1P44-201ENST00000508597 MANBALQ9NQG1 85 aa4.03□□□□□ -1.76
HMGB1P44-201ENST00000508597 UBQLN2Q9UHD9 624 aa4.03□□□□□ -1.76
HMGB1P44-201ENST00000508597 SELENOKQ9Y6D0 94 aa4.03□□□□□ -1.76
HMGB1P44-201ENST00000508597 hDV102S1A0JD36 115 aa4.02□□□□□ -1.77
HMGB1P44-201ENST00000508597 PGPA6NDG6 321 aa4.02□□□□□ -1.77
HMGB1P44-201ENST00000508597 SLC17A3O00476 420 aa4.02□□□□□ -1.77
HMGB1P44-201ENST00000508597 HMGB3O15347 200 aaKnown RBP4.02□□□□□ -1.77
HMGB1P44-201ENST00000508597 S100A9P06702 114 aaKnown RBP4.02□□□□□ -1.77
HMGB1P44-201ENST00000508597 NMBP08949 121 aa4.02□□□□□ -1.77
HMGB1P44-201ENST00000508597 TSPOP30536 169 aa4.02□□□□□ -1.77
HMGB1P44-201ENST00000508597 DEFB121Q5J5C9 76 aa4.02□□□□□ -1.77
HMGB1P44-201ENST00000508597 ACTL10Q5JWF8 245 aa4.02□□□□□ -1.77
HMGB1P44-201ENST00000508597 ALKAL2Q6UX46 152 aa4.02□□□□□ -1.77
HMGB1P44-201ENST00000508597 ZNF767PQ75MW2 155 aa4.02□□□□□ -1.77
HMGB1P44-201ENST00000508597 SSX7Q7RTT5 188 aa4.02□□□□□ -1.77
HMGB1P44-201ENST00000508597 TRPT1Q86TN4 253 aaKnown RBP4.02□□□□□ -1.77
HMGB1P44-201ENST00000508597 APRG1Q8IVJ8 170 aa4.02□□□□□ -1.77
HMGB1P44-201ENST00000508597 IQCF2Q8IXL9 164 aa4.02□□□□□ -1.77
HMGB1P44-201ENST00000508597 C5orf17Q8NAS9 161 aa4.02□□□□□ -1.77
HMGB1P44-201ENST00000508597 ZNF680Q8NEM1 530 aa4.02□□□□□ -1.77
HMGB1P44-201ENST00000508597 LYPD6BQ8NI32 183 aa4.02□□□□□ -1.77
HMGB1P44-201ENST00000508597 HIST1H2BAQ96A08 127 aa4.02□□□□□ -1.77
HMGB1P44-201ENST00000508597 B9D2Q9BPU9 175 aa4.02□□□□□ -1.77
HMGB1P44-201ENST00000508597 CSTL1Q9H114 145 aa4.02□□□□□ -1.77
HMGB1P44-201ENST00000508597 TP53TG1Q9Y2A0 90 aa4.02□□□□□ -1.77
HMGB1P44-201ENST00000508597 LENEPQ9Y5L5 61 aa4.02□□□□□ -1.77
HMGB1P44-201ENST00000508597 MEGF8Q7Z7M0 2845 aa4.01□□□□□ -1.77
HMGB1P44-201ENST00000508597 RBMY1BA6NDE4 496 aaKnown RBP4.01□□□□□ -1.77
HMGB1P44-201ENST00000508597 RBMY1EA6NEQ0 496 aaKnown RBP4.01□□□□□ -1.77
HMGB1P44-201ENST00000508597 FAM74A7A6NL05 159 aa4.01□□□□□ -1.77
HMGB1P44-201ENST00000508597 H3BTX0 84 aa4.01□□□□□ -1.77
HMGB1P44-201ENST00000508597 RBMY1DP0C7P1 496 aaKnown RBP4.01□□□□□ -1.77
HMGB1P44-201ENST00000508597 FRMD6-AS1P0C7T7 363 aa4.01□□□□□ -1.77
HMGB1P44-201ENST00000508597 CNN1P51911 297 aaKnown RBP4.01□□□□□ -1.77
HMGB1P44-201ENST00000508597 FGF8P55075 233 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P44-201ENST00000508597 RAB14P61106 215 aa4.01□□□□□ -1.77
HMGB1P44-201ENST00000508597 TMEM78Q5T7P6 136 aa4.01□□□□□ -1.77
HMGB1P44-201ENST00000508597 WDR73Q6P4I2 378 aa4.01□□□□□ -1.77
HMGB1P44-201ENST00000508597 EXOC3-AS1Q8N2X6 119 aa4.01□□□□□ -1.77
HMGB1P44-201ENST00000508597 RNF182Q8N6D2 247 aa4.01□□□□□ -1.77
HMGB1P44-201ENST00000508597 C20orf144Q9BQM9 153 aa4.01□□□□□ -1.77
HMGB1P44-201ENST00000508597 ATG101Q9BSB4 218 aa4.01□□□□□ -1.77
HMGB1P44-201ENST00000508597 EPDR1Q9UM22 224 aa4.01□□□□□ -1.77
HMGB1P44-201ENST00000508597 NBEAL2Q6ZNJ1 2754 aa4□□□□□ -1.77
HMGB1P44-201ENST00000508597 TRBV6-1A0A0K0K1D8 114 aa4□□□□□ -1.77
HMGB1P44-201ENST00000508597 KNCNA6PVL3 124 aa4□□□□□ -1.77
HMGB1P44-201ENST00000508597 ZNF705FA8MVS1 300 aaPredicted RBP4□□□□□ -1.77
HMGB1P44-201ENST00000508597 GGTLC3B5MD39 225 aa4□□□□□ -1.77
HMGB1P44-201ENST00000508597 M0R3E3 92 aa4□□□□□ -1.77
HMGB1P44-201ENST00000508597 PDE6DO43924 150 aa4□□□□□ -1.77
HMGB1P44-201ENST00000508597 PRB2P02812 416 aaPredicted RBP4□□□□□ -1.77
HMGB1P44-201ENST00000508597 TCRAP04437 139 aa4□□□□□ -1.77
HMGB1P44-201ENST00000508597 SNRPCP09234 159 aaKnown RBP4□□□□□ -1.77
HMGB1P44-201ENST00000508597 CRISP2P16562 243 aa4□□□□□ -1.77
HMGB1P44-201ENST00000508597 HLA-DMBP28068 263 aa4□□□□□ -1.77
HMGB1P44-201ENST00000508597 LEPP41159 167 aa4□□□□□ -1.77
HMGB1P44-201ENST00000508597 CDKN1BP46527 198 aa4□□□□□ -1.77
HMGB1P44-201ENST00000508597 HIST1H1AQ02539 215 aaPredicted RBP4□□□□□ -1.77
HMGB1P44-201ENST00000508597 HAGHQ16775 308 aa4□□□□□ -1.77
HMGB1P44-201ENST00000508597 SAPCD1Q5SSQ6 148 aa4□□□□□ -1.77
HMGB1P44-201ENST00000508597 CST9LP1Q5W188 147 aa4□□□□□ -1.77
HMGB1P44-201ENST00000508597 CYB561D1Q8N8Q1 229 aa4□□□□□ -1.77
HMGB1P44-201ENST00000508597 TMEM75Q8N9X5 138 aa4□□□□□ -1.77
HMGB1P44-201ENST00000508597 OR4B1Q8NGF8 309 aa4□□□□□ -1.77
HMGB1P44-201ENST00000508597 ZNF479Q96JC4 524 aa4□□□□□ -1.77
HMGB1P44-201ENST00000508597 WFDC10AQ9H1F0 79 aa4□□□□□ -1.77
HMGB1P44-201ENST00000508597 SMDT1Q9H4I9 107 aa4□□□□□ -1.77
HMGB1P44-201ENST00000508597 ZNF492Q9P255 531 aa4□□□□□ -1.77
HMGB1P44-201ENST00000508597 GNG13Q9P2W3 67 aa4□□□□□ -1.77
HMGB1P44-201ENST00000508597 VAX2Q9UIW0 290 aa4□□□□□ -1.77
HMGB1P44-201ENST00000508597 PRKDCP78527 4128 aaKnown RBP4□□□□□ -1.77
HMGB1P44-201ENST00000508597 IGLV5-37A0A075B6J1 123 aa3.99□□□□□ -1.77
HMGB1P44-201ENST00000508597 SMIM9A6NGZ8 99 aa3.99□□□□□ -1.77
HMGB1P44-201ENST00000508597 KRTAP29-1A8MX34 341 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P44-201ENST00000508597 C11orf94C9JXX5 98 aa3.99□□□□□ -1.77
HMGB1P44-201ENST00000508597 PRAC2D3DTV9 90 aa3.99□□□□□ -1.77
HMGB1P44-201ENST00000508597 F6UB75 175 aa3.99□□□□□ -1.77
HMGB1P44-201ENST00000508597 PEX7O00628 323 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms