RNA–Protein interactions for RNA: ENST00000508382.1

SGCA-206, Transcript of sarcoglycan alpha, humanhuman

TSL 5

Gene SGCA, Length 410 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-206ENST00000508382 FRMD6-AS1P0C7T7 363 aa10.21□□□□□ -0.77
SGCA-206ENST00000508382 CDX1P47902 265 aaPredicted RBP10.21□□□□□ -0.77
SGCA-206ENST00000508382 ACTL10Q5JWF8 245 aa10.21□□□□□ -0.77
SGCA-206ENST00000508382 LCN12Q6JVE5 192 aa10.21□□□□□ -0.77
SGCA-206ENST00000508382 UNQ9165/PRO28630Q6UXU0 137 aa10.21□□□□□ -0.77
SGCA-206ENST00000508382 NUDT10Q8NFP7 164 aa10.21□□□□□ -0.77
SGCA-206ENST00000508382 NUDT11Q96G61 164 aa10.21□□□□□ -0.77
SGCA-206ENST00000508382 RAX2Q96IS3 184 aa10.21□□□□□ -0.77
SGCA-206ENST00000508382 C16orf92Q96LL3 132 aa10.21□□□□□ -0.77
SGCA-206ENST00000508382 NRN1Q9NPD7 142 aa10.21□□□□□ -0.77
SGCA-206ENST00000508382 SMPXQ9UHP9 88 aa10.21□□□□□ -0.77
SGCA-206ENST00000508382 ZNF256Q9Y2P7 627 aaPredicted RBP10.21□□□□□ -0.77
SGCA-206ENST00000508382 IZUMO1RA6ND01 250 aa10.2□□□□□ -0.78
SGCA-206ENST00000508382 NPIPB6E9PJ23 425 aa10.2□□□□□ -0.78
SGCA-206ENST00000508382 OVOL1O14753 267 aa10.2□□□□□ -0.78
SGCA-206ENST00000508382 TRGC2P03986 189 aa10.2□□□□□ -0.78
SGCA-206ENST00000508382 ID1P41134 155 aa10.2□□□□□ -0.78
SGCA-206ENST00000508382 RPS20P60866 119 aaKnown RBP10.2□□□□□ -0.78
SGCA-206ENST00000508382 TMEM78Q5T7P6 136 aa10.2□□□□□ -0.78
SGCA-206ENST00000508382 ZFP82Q8N141 532 aa10.2□□□□□ -0.78
SGCA-206ENST00000508382 C4orf3Q8WVX3 66 aa10.2□□□□□ -0.78
SGCA-206ENST00000508382 RHPN1-AS1Q9BWJ2 59 aa10.2□□□□□ -0.78
SGCA-206ENST00000508382 LENEPQ9Y5L5 61 aa10.2□□□□□ -0.78
SGCA-206ENST00000508382 TRAV8-1A0A0A6YYK1 113 aa10.19□□□□□ -0.78
SGCA-206ENST00000508382 IGHV3-66A0A0C4DH42 116 aa10.19□□□□□ -0.78
SGCA-206ENST00000508382 APOHP02749 345 aaPredicted RBP10.19□□□□□ -0.78
SGCA-206ENST00000508382 S100A8P05109 93 aa10.19□□□□□ -0.78
SGCA-206ENST00000508382 SMUG1Q53HV7 270 aa10.19□□□□□ -0.78
SGCA-206ENST00000508382 FAM162BQ5T6X4 162 aa10.19□□□□□ -0.78
SGCA-206ENST00000508382 LCNL1Q6ZST4 164 aa10.19□□□□□ -0.78
SGCA-206ENST00000508382 KLHL30-AS1Q8NEE0 82 aa10.19□□□□□ -0.78
SGCA-206ENST00000508382 TM2D3Q9BRN9 247 aa10.19□□□□□ -0.78
SGCA-206ENST00000508382 GNB1LQ9BYB4 327 aa10.19□□□□□ -0.78
SGCA-206ENST00000508382 ZMAT4Q9H898 229 aa10.19□□□□□ -0.78
SGCA-206ENST00000508382 PPP1R14DQ9NXH3 145 aa10.19□□□□□ -0.78
SGCA-206ENST00000508382 TRAPPC1Q9Y5R8 145 aa10.19□□□□□ -0.78
SGCA-206ENST00000508382 A0A1B0GW15 77 aa10.18□□□□□ -0.78
SGCA-206ENST00000508382 HLA-DQA1P01909 254 aa10.18□□□□□ -0.78
SGCA-206ENST00000508382 DEFB136Q30KP8 78 aa10.18□□□□□ -0.78
SGCA-206ENST00000508382 C9orf66Q5T8R8 295 aa10.18□□□□□ -0.78
SGCA-206ENST00000508382 SGK494Q96LW2 274 aa10.18□□□□□ -0.78
SGCA-206ENST00000508382 PEMTQ9UBM1 199 aa10.18□□□□□ -0.78
SGCA-206ENST00000508382 IGHV3OR16-13A0A075B7E8 117 aa10.17□□□□□ -0.78
SGCA-206ENST00000508382 IGKV2-40A0A087WW87 121 aaPredicted RBP10.17□□□□□ -0.78
SGCA-206ENST00000508382 IGHV3-49A0A0A0MS15 119 aa10.17□□□□□ -0.78
SGCA-206ENST00000508382 IGHV3-74A0A0B4J1X5 117 aa10.17□□□□□ -0.78
SGCA-206ENST00000508382 TRBV7-9A0A0J9YWB2 115 aa10.17□□□□□ -0.78
SGCA-206ENST00000508382 C5orf52A6NGY3 159 aa10.17□□□□□ -0.78
SGCA-206ENST00000508382 UBE2CO00762 179 aa10.17□□□□□ -0.78
SGCA-206ENST00000508382 HIST1H2BKO60814 126 aa10.17□□□□□ -0.78
SGCA-206ENST00000508382 IGKV2D-40P01614 121 aaPredicted RBP10.17□□□□□ -0.78
SGCA-206ENST00000508382 HIST1H2BJP06899 126 aa10.17□□□□□ -0.78
SGCA-206ENST00000508382 HIST1H2BOP23527 126 aa10.17□□□□□ -0.78
SGCA-206ENST00000508382 HIST1H2BBP33778 126 aa10.17□□□□□ -0.78
SGCA-206ENST00000508382 ZNF138P52744 262 aa10.17□□□□□ -0.78
SGCA-206ENST00000508382 HIST1H2BDP58876 126 aa10.17□□□□□ -0.78
SGCA-206ENST00000508382 HIST1H2BCP62807 126 aa10.17□□□□□ -0.78
SGCA-206ENST00000508382 HIST2H2BEQ16778 126 aa10.17□□□□□ -0.78
SGCA-206ENST00000508382 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.17□□□□□ -0.78
SGCA-206ENST00000508382 RBPMS2Q6ZRY4 209 aaKnown RBP10.17□□□□□ -0.78
SGCA-206ENST00000508382 ZNF738Q8NE65 137 aa10.17□□□□□ -0.78
SGCA-206ENST00000508382 OR2D3Q8NGH3 330 aa10.17□□□□□ -0.78
SGCA-206ENST00000508382 OR10J6PQ8NGY7 276 aa10.17□□□□□ -0.78
SGCA-206ENST00000508382 HIST1H2BHQ93079 126 aa10.17□□□□□ -0.78
SGCA-206ENST00000508382 BORCS7Q96B45 105 aa10.17□□□□□ -0.78
SGCA-206ENST00000508382 ZC2HC1AQ96GY0 325 aa10.17□□□□□ -0.78
SGCA-206ENST00000508382 HIST1H2BNQ99877 126 aa10.17□□□□□ -0.78
SGCA-206ENST00000508382 HIST1H2BMQ99879 126 aa10.17□□□□□ -0.78
SGCA-206ENST00000508382 TRAV8-2A0A0B4J237 113 aa10.16□□□□□ -0.78
SGCA-206ENST00000508382 LINC01619G3V211 115 aa10.16□□□□□ -0.78
SGCA-206ENST00000508382 CCL24O00175 119 aa10.16□□□□□ -0.78
SGCA-206ENST00000508382 TRGC1P0CF51 173 aa10.16□□□□□ -0.78
SGCA-206ENST00000508382 RPL11P62913 178 aaKnown RBP10.16□□□□□ -0.78
SGCA-206ENST00000508382 C9orf47Q6ZRZ4 202 aa10.16□□□□□ -0.78
SGCA-206ENST00000508382 TCF24Q7RTU0 167 aa10.16□□□□□ -0.78
SGCA-206ENST00000508382 FRZBQ92765 325 aa10.16□□□□□ -0.78
SGCA-206ENST00000508382 NEU1Q99519 415 aa10.16□□□□□ -0.78
SGCA-206ENST00000508382 IGHV4OR15-8A0A075B7B6 117 aa10.15□□□□□ -0.78
SGCA-206ENST00000508382 A0A087WW49 117 aa10.15□□□□□ -0.78
SGCA-206ENST00000508382 TMEM213A2RRL7 107 aa10.15□□□□□ -0.78
SGCA-206ENST00000508382 HIGD1CA8MV81 97 aa10.15□□□□□ -0.78
SGCA-206ENST00000508382 SOCS3O14543 225 aa10.15□□□□□ -0.78
SGCA-206ENST00000508382 PHOX2AO14813 284 aa10.15□□□□□ -0.78
SGCA-206ENST00000508382 TCL1AP56279 114 aa10.15□□□□□ -0.78
SGCA-206ENST00000508382 PAFAH1B2P68402 229 aa10.15□□□□□ -0.78
SGCA-206ENST00000508382 TM4SF20Q53R12 229 aa10.15□□□□□ -0.78
SGCA-206ENST00000508382 LINC00477Q96M19 166 aa10.15□□□□□ -0.78
SGCA-206ENST00000508382 VPS13DQ5THJ4 4388 aa10.14□□□□□ -0.79
SGCA-206ENST00000508382 TRAV2A0A0B4J234 112 aa10.14□□□□□ -0.79
SGCA-206ENST00000508382 SNURFLB1AK76 121 aa10.14□□□□□ -0.79
SGCA-206ENST00000508382 FOXA3P55318 350 aaPredicted RBP10.14□□□□□ -0.79
SGCA-206ENST00000508382 SNRPEP62304 92 aaKnown RBP10.14□□□□□ -0.79
SGCA-206ENST00000508382 SNRPD3P62318 126 aaKnown RBP10.14□□□□□ -0.79
SGCA-206ENST00000508382 HBBP68871 147 aa10.14□□□□□ -0.79
SGCA-206ENST00000508382 HIST1H1AQ02539 215 aaPredicted RBP10.14□□□□□ -0.79
SGCA-206ENST00000508382 FABP9Q0Z7S8 132 aa10.14□□□□□ -0.79
SGCA-206ENST00000508382 KLF5Q13887 457 aaPredicted RBP10.14□□□□□ -0.79
SGCA-206ENST00000508382 COA6Q5JTJ3 125 aaKnown RBP10.14□□□□□ -0.79
SGCA-206ENST00000508382 NUP35Q8NFH5 326 aa10.14□□□□□ -0.79
SGCA-206ENST00000508382 TMEM189A5PLL7 270 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms