RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 DNAJC30Q96LL9 226 aa2.35□□□□□ -2.03
NEDD4-208ENST00000508342 NCOA6Q14686 2063 aaPredicted RBP2.35□□□□□ -2.03
NEDD4-208ENST00000508342 USP34Q70CQ2 3546 aa2.35□□□□□ -2.03
NEDD4-208ENST00000508342 LINC01549A6NIU2 74 aa2.35□□□□□ -2.03
NEDD4-208ENST00000508342 C17orf98A8MV24 154 aa2.35□□□□□ -2.03
NEDD4-208ENST00000508342 H3BMM0 161 aa2.35□□□□□ -2.03
NEDD4-208ENST00000508342 PAX9P55771 341 aa2.35□□□□□ -2.03
NEDD4-208ENST00000508342 SEC61GP60059 68 aa2.35□□□□□ -2.03
NEDD4-208ENST00000508342 INSL4Q14641 139 aa2.35□□□□□ -2.03
NEDD4-208ENST00000508342 UBE2WQ96B02 151 aa2.35□□□□□ -2.03
NEDD4-208ENST00000508342 KLHDC3Q9BQ90 382 aa2.35□□□□□ -2.03
NEDD4-208ENST00000508342 Q9H3A6 140 aa2.35□□□□□ -2.03
NEDD4-208ENST00000508342 ZNRD1Q9P1U0 126 aa2.35□□□□□ -2.03
NEDD4-208ENST00000508342 A0A087X002 238 aa2.35□□□□□ -2.03
NEDD4-208ENST00000508342 LRCOL1A6NCL2 159 aa2.35□□□□□ -2.03
NEDD4-208ENST00000508342 F2Z2F3 143 aa2.35□□□□□ -2.03
NEDD4-208ENST00000508342 VCYO14598 125 aa2.35□□□□□ -2.03
NEDD4-208ENST00000508342 RS1O15537 224 aa2.35□□□□□ -2.03
NEDD4-208ENST00000508342 NDUFS5O43920 106 aa2.35□□□□□ -2.03
NEDD4-208ENST00000508342 PFN1P07737 140 aaKnown RBP2.35□□□□□ -2.03
NEDD4-208ENST00000508342 AZU1P20160 251 aa2.35□□□□□ -2.03
NEDD4-208ENST00000508342 ZNF134P52741 427 aa2.35□□□□□ -2.03
NEDD4-208ENST00000508342 GFI1BQ5VTD9 330 aa2.35□□□□□ -2.03
NEDD4-208ENST00000508342 RASL10AQ92737 203 aa2.35□□□□□ -2.03
NEDD4-208ENST00000508342 AMELYQ99218 206 aa2.35□□□□□ -2.03
NEDD4-208ENST00000508342 RFNGQ9Y644 331 aa2.35□□□□□ -2.03
NEDD4-208ENST00000508342 ATRQ13535 2644 aa2.35□□□□□ -2.03
NEDD4-208ENST00000508342 TMEM89A2RUT3 159 aa2.34□□□□□ -2.03
NEDD4-208ENST00000508342 NUPR2A6NF83 97 aa2.34□□□□□ -2.03
NEDD4-208ENST00000508342 C15orf62A8K5M9 175 aa2.34□□□□□ -2.03
NEDD4-208ENST00000508342 ATP5G1P05496 136 aa2.34□□□□□ -2.03
NEDD4-208ENST00000508342 CCL1P22362 96 aa2.34□□□□□ -2.03
NEDD4-208ENST00000508342 CBLN1P23435 193 aa2.34□□□□□ -2.03
NEDD4-208ENST00000508342 ATP5G3P48201 142 aa2.34□□□□□ -2.03
NEDD4-208ENST00000508342 MEF2BQ02080 365 aaPredicted RBP2.34□□□□□ -2.03
NEDD4-208ENST00000508342 ORMDL3Q8N138 153 aa2.34□□□□□ -2.03
NEDD4-208ENST00000508342 FAM24BQ8N5W8 94 aa2.34□□□□□ -2.03
NEDD4-208ENST00000508342 ZNF414Q96IQ9 312 aa2.34□□□□□ -2.03
NEDD4-208ENST00000508342 ST6GAL2Q96JF0 529 aa2.34□□□□□ -2.03
NEDD4-208ENST00000508342 FUT9Q9Y231 359 aa2.34□□□□□ -2.03
NEDD4-208ENST00000508342 KLF12Q9Y4X4 402 aa2.34□□□□□ -2.03
NEDD4-208ENST00000508342 A0A096LPF7 62 aa2.34□□□□□ -2.03
NEDD4-208ENST00000508342 NDUFA4O00483 81 aa2.34□□□□□ -2.03
NEDD4-208ENST00000508342 FAM19A5Q7Z5A7 132 aaPredicted RBP2.34□□□□□ -2.03
NEDD4-208ENST00000508342 PCNTO95613 3336 aa2.34□□□□□ -2.03
NEDD4-208ENST00000508342 A0A0J9YY99 117 aa2.34□□□□□ -2.03
NEDD4-208ENST00000508342 A0A1B0GW64 132 aa2.34□□□□□ -2.03
NEDD4-208ENST00000508342 GAGE12JA6NER3 117 aa2.34□□□□□ -2.03
NEDD4-208ENST00000508342 FXYD1O00168 92 aa2.34□□□□□ -2.03
NEDD4-208ENST00000508342 LGALS1P09382 135 aaKnown RBP2.34□□□□□ -2.03
NEDD4-208ENST00000508342 ZNF138P52744 262 aa2.34□□□□□ -2.03
NEDD4-208ENST00000508342 GAGE4Q13068 117 aa2.34□□□□□ -2.03
NEDD4-208ENST00000508342 GAGE5Q13069 117 aa2.34□□□□□ -2.03
NEDD4-208ENST00000508342 GAGE13Q4V321 117 aa2.34□□□□□ -2.03
NEDD4-208ENST00000508342 SH2D6Q7Z4S9 175 aa2.34□□□□□ -2.03
NEDD4-208ENST00000508342 PLPPR1Q8TBJ4 325 aa2.34□□□□□ -2.03
NEDD4-208ENST00000508342 FMC1Q96HJ9 113 aa2.34□□□□□ -2.03
NEDD4-208ENST00000508342 RND3P61587 244 aa2.34□□□□□ -2.04
NEDD4-208ENST00000508342 SPINK13Q1W4C9 94 aa2.34□□□□□ -2.04
NEDD4-208ENST00000508342 TEX43Q6ZNM6 134 aa2.34□□□□□ -2.04
NEDD4-208ENST00000508342 C9orf62Q8N4C0 152 aa2.34□□□□□ -2.04
NEDD4-208ENST00000508342 ZNF114Q8NC26 417 aa2.34□□□□□ -2.04
NEDD4-208ENST00000508342 C11orf45Q8TAV5 145 aa2.34□□□□□ -2.04
NEDD4-208ENST00000508342 OTORQ9NRC9 128 aa2.34□□□□□ -2.04
NEDD4-208ENST00000508342 TMEM14BQ9NUH8 114 aa2.34□□□□□ -2.04
NEDD4-208ENST00000508342 SIGLEC8Q9NYZ4 499 aa2.34□□□□□ -2.04
NEDD4-208ENST00000508342 IGLV3-9A0A075B6K5 115 aa2.34□□□□□ -2.04
NEDD4-208ENST00000508342 IGHV4OR15-8A0A075B7B6 117 aa2.34□□□□□ -2.04
NEDD4-208ENST00000508342 A0A087WW49 117 aa2.34□□□□□ -2.04
NEDD4-208ENST00000508342 TRAV5A0A0B4J249 113 aa2.34□□□□□ -2.04
NEDD4-208ENST00000508342 F6UB75 175 aa2.34□□□□□ -2.04
NEDD4-208ENST00000508342 F8VVB4 439 aa2.34□□□□□ -2.04
NEDD4-208ENST00000508342 F8VWA3 439 aa2.34□□□□□ -2.04
NEDD4-208ENST00000508342 TNFRSF13BO14836 293 aaPredicted RBP2.34□□□□□ -2.04
NEDD4-208ENST00000508342 BUB3O43684 328 aa2.34□□□□□ -2.04
NEDD4-208ENST00000508342 GATA1P15976 413 aaPredicted RBP2.34□□□□□ -2.04
NEDD4-208ENST00000508342 SUPT4H1P63272 117 aaKnown RBP2.34□□□□□ -2.04
NEDD4-208ENST00000508342 ORMDL2Q53FV1 153 aa2.34□□□□□ -2.04
NEDD4-208ENST00000508342 AMTNQ6UX39 209 aa2.34□□□□□ -2.04
NEDD4-208ENST00000508342 Q6ZR03 302 aa2.34□□□□□ -2.04
NEDD4-208ENST00000508342 SLC25A2Q9BXI2 301 aa2.34□□□□□ -2.04
NEDD4-208ENST00000508342 ANKRD11Q6UB99 2663 aaPredicted RBP2.33□□□□□ -2.04
NEDD4-208ENST00000508342 H0YJW9 148 aa2.33□□□□□ -2.04
NEDD4-208ENST00000508342 GCHFRP30047 84 aa2.33□□□□□ -2.04
NEDD4-208ENST00000508342 RBMY1FQ15415 496 aaKnown RBP2.33□□□□□ -2.04
NEDD4-208ENST00000508342 C10orf91Q5T1B1 145 aa2.33□□□□□ -2.04
NEDD4-208ENST00000508342 C5orf56Q8N8D9 126 aa2.33□□□□□ -2.04
NEDD4-208ENST00000508342 C16orf95Q9H693 158 aa2.33□□□□□ -2.04
NEDD4-208ENST00000508342 FBLN5Q9UBX5 448 aa2.33□□□□□ -2.04
NEDD4-208ENST00000508342 C5orf63A6NC05 138 aa2.33□□□□□ -2.04
NEDD4-208ENST00000508342 M0R2N4 97 aa2.33□□□□□ -2.04
NEDD4-208ENST00000508342 NDUFA3O95167 84 aa2.33□□□□□ -2.04
NEDD4-208ENST00000508342 NPSP0C0P6 89 aa2.33□□□□□ -2.04
NEDD4-208ENST00000508342 BCL2P10415 239 aa2.33□□□□□ -2.04
NEDD4-208ENST00000508342 GZMMP51124 257 aa2.33□□□□□ -2.04
NEDD4-208ENST00000508342 PLP1P60201 277 aa2.33□□□□□ -2.04
NEDD4-208ENST00000508342 HERV-K104P63124 156 aa2.33□□□□□ -2.04
NEDD4-208ENST00000508342 UBE2V1Q13404 147 aa2.33□□□□□ -2.04
NEDD4-208ENST00000508342 ZNF79Q15937 498 aa2.33□□□□□ -2.04
NEDD4-208ENST00000508342 C14orf177Q52M58 125 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms