RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 TECTAO75443 2155 aa3.84□□□□□ -1.79
HMGB3P16-201ENST00000508037 REV3LO60673 3130 aa3.84□□□□□ -1.8
HMGB3P16-201ENST00000508037 IGKV2D-26A0A0A0MRZ7 120 aa3.83□□□□□ -1.8
HMGB3P16-201ENST00000508037 TRBV7-1A0A0A6YYK4 115 aa3.83□□□□□ -1.8
HMGB3P16-201ENST00000508037 TRAV40A0A0B4J280 105 aa3.83□□□□□ -1.8
HMGB3P16-201ENST00000508037 H3BMG7 143 aa3.83□□□□□ -1.8
HMGB3P16-201ENST00000508037 BUB3O43684 328 aa3.83□□□□□ -1.8
HMGB3P16-201ENST00000508037 FOXE3Q13461 319 aa3.83□□□□□ -1.8
HMGB3P16-201ENST00000508037 C9orf47Q6ZRZ4 202 aa3.83□□□□□ -1.8
HMGB3P16-201ENST00000508037 C9orf139Q6ZV77 190 aa3.83□□□□□ -1.8
HMGB3P16-201ENST00000508037 Q71RC1 249 aaPredicted RBP3.83□□□□□ -1.8
HMGB3P16-201ENST00000508037 DYNAPQ8N1N2 210 aa3.83□□□□□ -1.8
HMGB3P16-201ENST00000508037 DEFB123Q8N688 67 aa3.83□□□□□ -1.8
HMGB3P16-201ENST00000508037 Q8N6K4 173 aa3.83□□□□□ -1.8
HMGB3P16-201ENST00000508037 NRACQ8N912 160 aa3.83□□□□□ -1.8
HMGB3P16-201ENST00000508037 Q8TAT8 98 aa3.83□□□□□ -1.8
HMGB3P16-201ENST00000508037 DLX4Q92988 240 aaPredicted RBP3.83□□□□□ -1.8
HMGB3P16-201ENST00000508037 EEF1AKMT3Q96AZ1 226 aa3.83□□□□□ -1.8
HMGB3P16-201ENST00000508037 TOMM6Q96B49 74 aa3.83□□□□□ -1.8
HMGB3P16-201ENST00000508037 SCGB3A1Q96QR1 104 aa3.83□□□□□ -1.8
HMGB3P16-201ENST00000508037 VKORC1Q9BQB6 163 aa3.83□□□□□ -1.8
HMGB3P16-201ENST00000508037 UFC1Q9Y3C8 167 aa3.83□□□□□ -1.8
HMGB3P16-201ENST00000508037 TSSC4Q9Y5U2 329 aaPredicted RBP3.83□□□□□ -1.8
HMGB3P16-201ENST00000508037 SMAD5-AS1Q9Y6J3 95 aa3.83□□□□□ -1.8
HMGB3P16-201ENST00000508037 CADP27708 2225 aa3.83□□□□□ -1.8
HMGB3P16-201ENST00000508037 NAV3Q8IVL0 2385 aa3.83□□□□□ -1.8
HMGB3P16-201ENST00000508037 UNC80Q8N2C7 3258 aa3.83□□□□□ -1.8
HMGB3P16-201ENST00000508037 CDH23Q9H251 3354 aa3.82□□□□□ -1.8
HMGB3P16-201ENST00000508037 TRBV7-3A0A075B6L6 115 aa3.82□□□□□ -1.8
HMGB3P16-201ENST00000508037 TRBV20-1A0A075B6N2 111 aa3.82□□□□□ -1.8
HMGB3P16-201ENST00000508037 IGHV1-69DA0A0B4J2H0 117 aa3.82□□□□□ -1.8
HMGB3P16-201ENST00000508037 TRBV7-9A0A0J9YWB2 115 aa3.82□□□□□ -1.8
HMGB3P16-201ENST00000508037 CENPVL3A0A0U1RRI6 287 aa3.82□□□□□ -1.8
HMGB3P16-201ENST00000508037 K7ERJ3 54 aa3.82□□□□□ -1.8
HMGB3P16-201ENST00000508037 OVOL1O14753 267 aa3.82□□□□□ -1.8
HMGB3P16-201ENST00000508037 APOMO95445 188 aa3.82□□□□□ -1.8
HMGB3P16-201ENST00000508037 IGHG4P01861 327 aa3.82□□□□□ -1.8
HMGB3P16-201ENST00000508037 ASIPP42127 132 aa3.82□□□□□ -1.8
HMGB3P16-201ENST00000508037 RPL32P62910 135 aaKnown RBP3.82□□□□□ -1.8
HMGB3P16-201ENST00000508037 SMAGPQ0VAQ4 97 aa3.82□□□□□ -1.8
HMGB3P16-201ENST00000508037 KLRD1Q13241 179 aa3.82□□□□□ -1.8
HMGB3P16-201ENST00000508037 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.82□□□□□ -1.8
HMGB3P16-201ENST00000508037 VMO1Q7Z5L0 202 aa3.82□□□□□ -1.8
HMGB3P16-201ENST00000508037 LINC00477Q96M19 166 aa3.82□□□□□ -1.8
HMGB3P16-201ENST00000508037 C1QTNF4Q9BXJ3 329 aa3.82□□□□□ -1.8
HMGB3P16-201ENST00000508037 GTSF1LQ9H1H1 148 aa3.82□□□□□ -1.8
HMGB3P16-201ENST00000508037 DPH3P1Q9H4G8 78 aa3.82□□□□□ -1.8
HMGB3P16-201ENST00000508037 MRPL16Q9NX20 251 aaKnown RBP3.82□□□□□ -1.8
HMGB3P16-201ENST00000508037 MSRB1Q9NZV6 116 aa3.82□□□□□ -1.8
HMGB3P16-201ENST00000508037 CYSLTR1Q9Y271 337 aa3.82□□□□□ -1.8
HMGB3P16-201ENST00000508037 URB1O60287 2271 aaKnown RBP3.81□□□□□ -1.8
HMGB3P16-201ENST00000508037 TRAV21A0A0B4J279 112 aa3.81□□□□□ -1.8
HMGB3P16-201ENST00000508037 IGKV3D-20A0A0C4DH25 116 aa3.81□□□□□ -1.8
HMGB3P16-201ENST00000508037 IGHV7-4-1A0A0J9YVY3 117 aa3.81□□□□□ -1.8
HMGB3P16-201ENST00000508037 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.81□□□□□ -1.8
HMGB3P16-201ENST00000508037 TMEM262E9PQX1 116 aa3.81□□□□□ -1.8
HMGB3P16-201ENST00000508037 CKS1BP61024 79 aa3.81□□□□□ -1.8
HMGB3P16-201ENST00000508037 SUMO2P61956 95 aaKnown RBP3.81□□□□□ -1.8
HMGB3P16-201ENST00000508037 ERCC8Q13216 396 aa3.81□□□□□ -1.8
HMGB3P16-201ENST00000508037 SRSF9Q13242 221 aaKnown RBP eCLIP3.81□□□□□ -1.8
HMGB3P16-201ENST00000508037 WFDC2Q14508 124 aa3.81□□□□□ -1.8
HMGB3P16-201ENST00000508037 C15orf32Q32M92 178 aa3.81□□□□□ -1.8
HMGB3P16-201ENST00000508037 ETDBQ3ZM63 59 aa3.81□□□□□ -1.8
HMGB3P16-201ENST00000508037 FBXL19-AS1Q494R0 122 aa3.81□□□□□ -1.8
HMGB3P16-201ENST00000508037 SCGB1D4Q6XE38 83 aa3.81□□□□□ -1.8
HMGB3P16-201ENST00000508037 NEXN-AS1Q8NBZ9 246 aa3.81□□□□□ -1.8
HMGB3P16-201ENST00000508037 OR10J6PQ8NGY7 276 aa3.81□□□□□ -1.8
HMGB3P16-201ENST00000508037 TMEM141Q96I45 108 aa3.81□□□□□ -1.8
HMGB3P16-201ENST00000508037 C16orf92Q96LL3 132 aa3.81□□□□□ -1.8
HMGB3P16-201ENST00000508037 SPAG8Q99932 426 aaPredicted RBP3.81□□□□□ -1.8
HMGB3P16-201ENST00000508037 AGPAT4-IT1Q9H0P7 198 aa3.81□□□□□ -1.8
HMGB3P16-201ENST00000508037 S4R3C0 116 aa3.81□□□□□ -1.8
HMGB3P16-201ENST00000508037 PLCE1Q9P212 2302 aa3.8□□□□□ -1.8
HMGB3P16-201ENST00000508037 IGHV7-81A0A0B4J1V7 117 aa3.8□□□□□ -1.8
HMGB3P16-201ENST00000508037 FAM223BA6NKX1 122 aa3.8□□□□□ -1.8
HMGB3P16-201ENST00000508037 ZNF815PA8K554 130 aa3.8□□□□□ -1.8
HMGB3P16-201ENST00000508037 M0QXV9 152 aa3.8□□□□□ -1.8
HMGB3P16-201ENST00000508037 TRGV3P03979 118 aa3.8□□□□□ -1.8
HMGB3P16-201ENST00000508037 GATA1P15976 413 aaPredicted RBP3.8□□□□□ -1.8
HMGB3P16-201ENST00000508037 S100A4P26447 101 aaKnown RBP3.8□□□□□ -1.8
HMGB3P16-201ENST00000508037 HLA-DMBP28068 263 aa3.8□□□□□ -1.8
HMGB3P16-201ENST00000508037 ATP5G2Q06055 141 aa3.8□□□□□ -1.8
HMGB3P16-201ENST00000508037 FOXI1Q12951 378 aa3.8□□□□□ -1.8
HMGB3P16-201ENST00000508037 CFAP126Q5VTH2 177 aa3.8□□□□□ -1.8
HMGB3P16-201ENST00000508037 CLEC2AQ6UVW9 174 aa3.8□□□□□ -1.8
HMGB3P16-201ENST00000508037 C2orf66Q6UXQ4 117 aa3.8□□□□□ -1.8
HMGB3P16-201ENST00000508037 FAM223AQ8IWN6 122 aa3.8□□□□□ -1.8
HMGB3P16-201ENST00000508037 MAPKAPK5-AS1Q8N8E1 139 aa3.8□□□□□ -1.8
HMGB3P16-201ENST00000508037 PPDPFLQ8WWR9 84 aa3.8□□□□□ -1.8
HMGB3P16-201ENST00000508037 SPANXA1Q9NS26 97 aa3.8□□□□□ -1.8
HMGB3P16-201ENST00000508037 PRO0461Q9UI25 63 aa3.8□□□□□ -1.8
HMGB3P16-201ENST00000508037 SH3BGRL2Q9UJC5 107 aa3.8□□□□□ -1.8
HMGB3P16-201ENST00000508037 PHLDA3Q9Y5J5 127 aa3.8□□□□□ -1.8
HMGB3P16-201ENST00000508037 MALRD1Q5VYJ5 2156 aa3.8□□□□□ -1.8
HMGB3P16-201ENST00000508037 ZDBF2Q9HCK1 2354 aa3.8□□□□□ -1.8
HMGB3P16-201ENST00000508037 TRAV8-2A0A0B4J237 113 aa3.79□□□□□ -1.8
HMGB3P16-201ENST00000508037 A8MWV9 139 aa3.79□□□□□ -1.8
HMGB3P16-201ENST00000508037 PRAC2D3DTV9 90 aa3.79□□□□□ -1.8
HMGB3P16-201ENST00000508037 LYNX1G3V0Z9 82 aa3.79□□□□□ -1.8
HMGB3P16-201ENST00000508037 H3BVH4 76 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms