RNA–Protein interactions for RNA: ENST00000507638.1

VEGFC-201, Transcript of vascular endothelial growth factor C, humanhuman

TSL 3

Gene VEGFC, Length 759 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-201ENST00000507638 MAPKAPK5-AS1Q8N8E1 139 aa4.36□□□□□ -1.71
VEGFC-201ENST00000507638 OR2Z1Q8NG97 314 aa4.36□□□□□ -1.71
VEGFC-201ENST00000507638 OR2K2Q8NGT1 345 aa4.36□□□□□ -1.71
VEGFC-201ENST00000507638 OR4A5Q8NH83 315 aa4.36□□□□□ -1.71
VEGFC-201ENST00000507638 VSTM2AQ8TAG5 236 aa4.36□□□□□ -1.71
VEGFC-201ENST00000507638 H1FXQ92522 213 aaKnown RBP4.36□□□□□ -1.71
VEGFC-201ENST00000507638 PAXXQ9BUH6 204 aa4.36□□□□□ -1.71
VEGFC-201ENST00000507638 IFI27L2Q9H2X8 130 aa4.36□□□□□ -1.71
VEGFC-201ENST00000507638 VCX2Q9H322 139 aa4.36□□□□□ -1.71
VEGFC-201ENST00000507638 RPP21Q9H633 154 aaKnown RBP4.36□□□□□ -1.71
VEGFC-201ENST00000507638 OBP2BQ9NPH6 170 aa4.36□□□□□ -1.71
VEGFC-201ENST00000507638 KLF12Q9Y4X4 402 aa4.36□□□□□ -1.71
VEGFC-201ENST00000507638 SRRM2Q9UQ35 2752 aaKnown RBP4.36□□□□□ -1.71
VEGFC-201ENST00000507638 HSPG2P98160 4391 aa4.35□□□□□ -1.71
VEGFC-201ENST00000507638 IGHV1-18A0A0C4DH31 117 aa4.35□□□□□ -1.71
VEGFC-201ENST00000507638 MUC21A0A0G2JKD1 596 aa4.35□□□□□ -1.71
VEGFC-201ENST00000507638 TRBV6-1A0A0K0K1D8 114 aa4.35□□□□□ -1.71
VEGFC-201ENST00000507638 MUC21A0A140T8X8 626 aa4.35□□□□□ -1.71
VEGFC-201ENST00000507638 HIGD1CA8MV81 97 aa4.35□□□□□ -1.71
VEGFC-201ENST00000507638 C15orf65H3BRN8 121 aa4.35□□□□□ -1.71
VEGFC-201ENST00000507638 K7EP34 96 aa4.35□□□□□ -1.71
VEGFC-201ENST00000507638 K7EQM0 130 aa4.35□□□□□ -1.71
VEGFC-201ENST00000507638 UPK2O00526 184 aa4.35□□□□□ -1.71
VEGFC-201ENST00000507638 SMIM13P0DJ93 91 aa4.35□□□□□ -1.71
VEGFC-201ENST00000507638 PRDX2P32119 198 aa4.35□□□□□ -1.71
VEGFC-201ENST00000507638 SSTR5P35346 364 aa4.35□□□□□ -1.71
VEGFC-201ENST00000507638 CFHR2P36980 270 aa4.35□□□□□ -1.71
VEGFC-201ENST00000507638 MPV17P39210 176 aa4.35□□□□□ -1.71
VEGFC-201ENST00000507638 CAMPP49913 170 aa4.35□□□□□ -1.71
VEGFC-201ENST00000507638 FOXA3P55318 350 aaPredicted RBP4.35□□□□□ -1.71
VEGFC-201ENST00000507638 BRWD1-AS2P59051 145 aa4.35□□□□□ -1.71
VEGFC-201ENST00000507638 PLP1P60201 277 aa4.35□□□□□ -1.71
VEGFC-201ENST00000507638 LGALS9BQ3B8N2 356 aa4.35□□□□□ -1.71
VEGFC-201ENST00000507638 MUC21Q5SSG8 566 aa4.35□□□□□ -1.71
VEGFC-201ENST00000507638 SAMD13Q5VXD3 122 aa4.35□□□□□ -1.71
VEGFC-201ENST00000507638 LGALS9CQ6DKI2 356 aa4.35□□□□□ -1.71
VEGFC-201ENST00000507638 LCN12Q6JVE5 192 aa4.35□□□□□ -1.71
VEGFC-201ENST00000507638 SLC25A48Q6ZT89 311 aaKnown RBP4.35□□□□□ -1.71
VEGFC-201ENST00000507638 PDPNQ86YL7 162 aa4.35□□□□□ -1.71
VEGFC-201ENST00000507638 ATOH7Q8N100 152 aa4.35□□□□□ -1.71
VEGFC-201ENST00000507638 PIFOQ8TCI5 191 aa4.35□□□□□ -1.71
VEGFC-201ENST00000507638 SIGMAR1Q99720 223 aa4.35□□□□□ -1.71
VEGFC-201ENST00000507638 CITED2Q99967 270 aaPredicted RBP4.35□□□□□ -1.71
VEGFC-201ENST00000507638 NPFFR1Q9GZQ6 430 aa4.35□□□□□ -1.71
VEGFC-201ENST00000507638 ZNF355PQ9NSJ1 428 aa4.35□□□□□ -1.71
VEGFC-201ENST00000507638 RABAC1Q9UI14 185 aa4.35□□□□□ -1.71
VEGFC-201ENST00000507638 EPDR1Q9UM22 224 aa4.35□□□□□ -1.71
VEGFC-201ENST00000507638 DYNC1H1Q14204 4646 aaKnown RBP4.34□□□□□ -1.71
VEGFC-201ENST00000507638 PKHD1P08F94 4074 aa4.34□□□□□ -1.71
VEGFC-201ENST00000507638 LOC102724200A0A096LPH7 203 aaPredicted RBP4.34□□□□□ -1.71
VEGFC-201ENST00000507638 IGHV1-24A0A0C4DH33 117 aa4.34□□□□□ -1.71
VEGFC-201ENST00000507638 PSMB11A5LHX3 300 aa4.34□□□□□ -1.71
VEGFC-201ENST00000507638 TMEM189A5PLL7 270 aa4.34□□□□□ -1.71
VEGFC-201ENST00000507638 OR2T8A6NH00 312 aa4.34□□□□□ -1.71
VEGFC-201ENST00000507638 FBLL1A6NHQ2 334 aaKnown RBP4.34□□□□□ -1.71
VEGFC-201ENST00000507638 GGTLC3B5MD39 225 aa4.34□□□□□ -1.71
VEGFC-201ENST00000507638 F8W1H4 67 aa4.34□□□□□ -1.71
VEGFC-201ENST00000507638 ACTL6BO94805 426 aa4.34□□□□□ -1.71
VEGFC-201ENST00000507638 PPIAL4GP0DN37 164 aa4.34□□□□□ -1.71
VEGFC-201ENST00000507638 CCL2P13500 99 aa4.34□□□□□ -1.71
VEGFC-201ENST00000507638 RPL8P62917 257 aaKnown RBP4.34□□□□□ -1.71
VEGFC-201ENST00000507638 SLC35B1P78383 322 aa4.34□□□□□ -1.71
VEGFC-201ENST00000507638 SPINK9Q5DT21 86 aa4.34□□□□□ -1.71
VEGFC-201ENST00000507638 SPATA31B1PQ5VZV4 182 aa4.34□□□□□ -1.71
VEGFC-201ENST00000507638 UFSP1Q6NVU6 142 aa4.34□□□□□ -1.71
VEGFC-201ENST00000507638 NEGR1Q7Z3B1 354 aa4.34□□□□□ -1.71
VEGFC-201ENST00000507638 ERASQ7Z444 233 aa4.34□□□□□ -1.71
VEGFC-201ENST00000507638 ZNF329Q86UD4 541 aa4.34□□□□□ -1.71
VEGFC-201ENST00000507638 MDP1Q86V88 176 aa4.34□□□□□ -1.71
VEGFC-201ENST00000507638 BOD1L2Q8IYS8 172 aa4.34□□□□□ -1.71
VEGFC-201ENST00000507638 C5orf17Q8NAS9 161 aa4.34□□□□□ -1.71
VEGFC-201ENST00000507638 GATD1Q8NB37 220 aa4.34□□□□□ -1.71
VEGFC-201ENST00000507638 NUP37Q8NFH4 326 aa4.34□□□□□ -1.71
VEGFC-201ENST00000507638 OR1B1Q8NGR6 318 aa4.34□□□□□ -1.71
VEGFC-201ENST00000507638 OR10X1Q8NGY0 326 aa4.34□□□□□ -1.71
VEGFC-201ENST00000507638 GLMPQ8WWB7 406 aa4.34□□□□□ -1.71
VEGFC-201ENST00000507638 COQ2Q96H96 371 aa4.34□□□□□ -1.71
VEGFC-201ENST00000507638 RNF7Q9UBF6 113 aa4.34□□□□□ -1.71
VEGFC-201ENST00000507638 A0A0G2JLM5 398 aa4.33□□□□□ -1.72
VEGFC-201ENST00000507638 A0A1B0GUT8 65 aa4.33□□□□□ -1.72
VEGFC-201ENST00000507638 TCRBV4S1A1TA0A5B7 111 aa4.33□□□□□ -1.72
VEGFC-201ENST00000507638 TNFRSF13BO14836 293 aaPredicted RBP4.33□□□□□ -1.72
VEGFC-201ENST00000507638 TIMM8AO60220 97 aaPredicted RBP4.33□□□□□ -1.72
VEGFC-201ENST00000507638 SLC25A5P05141 298 aaKnown RBP4.33□□□□□ -1.72
VEGFC-201ENST00000507638 DEFA4P12838 97 aa4.33□□□□□ -1.72
VEGFC-201ENST00000507638 S100A7P31151 101 aa4.33□□□□□ -1.72
VEGFC-201ENST00000507638 TAL2Q16559 108 aa4.33□□□□□ -1.72
VEGFC-201ENST00000507638 C10orf25Q5T742 122 aa4.33□□□□□ -1.72
VEGFC-201ENST00000507638 THAP8Q8NA92 274 aa4.33□□□□□ -1.72
VEGFC-201ENST00000507638 OR13A1Q8NGR1 328 aa4.33□□□□□ -1.72
VEGFC-201ENST00000507638 BLNKQ8WV28 456 aa4.33□□□□□ -1.72
VEGFC-201ENST00000507638 FAM234AQ9H0X4 552 aa4.33□□□□□ -1.72
VEGFC-201ENST00000507638 SPANXA1Q9NS26 97 aa4.33□□□□□ -1.72
VEGFC-201ENST00000507638 SIGLEC8Q9NYZ4 499 aa4.33□□□□□ -1.72
VEGFC-201ENST00000507638 HIGD1BQ9P298 99 aa4.33□□□□□ -1.72
VEGFC-201ENST00000507638 SMPXQ9UHP9 88 aa4.33□□□□□ -1.72
VEGFC-201ENST00000507638 TRAV8-6A0A0B4J262 113 aa4.32□□□□□ -1.72
VEGFC-201ENST00000507638 A0A1B0GVY2 172 aa4.32□□□□□ -1.72
VEGFC-201ENST00000507638 SERTM2A0A1B0GWG4 89 aa4.32□□□□□ -1.72
VEGFC-201ENST00000507638 A0A1W2PPM0 123 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms