RNA–Protein interactions for RNA: ENST00000507533.1

DDR1-260, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-260ENST00000507533 GAGE12IP0CL82 117 aa9.45□□□□□ -0.9
DDR1-260ENST00000507533 HIST1H1EP10412 219 aaKnown RBP9.45□□□□□ -0.9
DDR1-260ENST00000507533 RHOBP62745 196 aa9.45□□□□□ -0.9
DDR1-260ENST00000507533 SERF2P84101 59 aa9.45□□□□□ -0.9
DDR1-260ENST00000507533 GUK1Q16774 197 aa9.45□□□□□ -0.9
DDR1-260ENST00000507533 LINC00612Q8N6U2 182 aa9.45□□□□□ -0.9
DDR1-260ENST00000507533 RNASE8Q8TDE3 154 aaKnown RBP9.45□□□□□ -0.9
DDR1-260ENST00000507533 DEFB104AQ8WTQ1 72 aa9.45□□□□□ -0.9
DDR1-260ENST00000507533 TMEM263Q8WUH6 116 aaKnown RBP9.45□□□□□ -0.9
DDR1-260ENST00000507533 SLC25A2Q9BXI2 301 aa9.45□□□□□ -0.9
DDR1-260ENST00000507533 ZNF331Q9NQX6 463 aaPredicted RBP9.45□□□□□ -0.9
DDR1-260ENST00000507533 CYTL1Q9NRR1 136 aa9.45□□□□□ -0.9
DDR1-260ENST00000507533 PPP1R14DQ9NXH3 145 aa9.45□□□□□ -0.9
DDR1-260ENST00000507533 FAT3Q8TDW7 4589 aa9.44□□□□□ -0.9
DDR1-260ENST00000507533 H3BTX0 84 aa9.44□□□□□ -0.9
DDR1-260ENST00000507533 NXPH4O95158 308 aa9.44□□□□□ -0.9
DDR1-260ENST00000507533 PYYP10082 97 aa9.44□□□□□ -0.9
DDR1-260ENST00000507533 RAB2AP61019 212 aa9.44□□□□□ -0.9
DDR1-260ENST00000507533 PSG3Q16557 428 aa9.44□□□□□ -0.9
DDR1-260ENST00000507533 AKAP14Q86UN6 197 aa9.44□□□□□ -0.9
DDR1-260ENST00000507533 ZNF738Q8NE65 137 aa9.44□□□□□ -0.9
DDR1-260ENST00000507533 SAT2Q96F10 170 aaPredicted RBP9.44□□□□□ -0.9
DDR1-260ENST00000507533 ARPC5LQ9BPX5 153 aa9.44□□□□□ -0.9
DDR1-260ENST00000507533 OR51M1Q9H341 326 aa9.44□□□□□ -0.9
DDR1-260ENST00000507533 TRBV19A0A075B6N1 114 aa9.43□□□□□ -0.9
DDR1-260ENST00000507533 A0A1B0GVG6 124 aa9.43□□□□□ -0.9
DDR1-260ENST00000507533 A0A1W2PPV4 95 aa9.43□□□□□ -0.9
DDR1-260ENST00000507533 SLC17A3O00476 420 aa9.43□□□□□ -0.9
DDR1-260ENST00000507533 ZNF253O75346 499 aa9.43□□□□□ -0.9
DDR1-260ENST00000507533 MBP02144 154 aa9.43□□□□□ -0.9
DDR1-260ENST00000507533 TAS2R45P59539 299 aa9.43□□□□□ -0.9
DDR1-260ENST00000507533 HIST1H1AQ02539 215 aaPredicted RBP9.43□□□□□ -0.9
DDR1-260ENST00000507533 OR10G4Q8NGN3 311 aa9.43□□□□□ -0.9
DDR1-260ENST00000507533 OR10G9Q8NGN4 311 aa9.43□□□□□ -0.9
DDR1-260ENST00000507533 OR10G7Q8NGN6 311 aa9.43□□□□□ -0.9
DDR1-260ENST00000507533 PAXXQ9BUH6 204 aa9.43□□□□□ -0.9
DDR1-260ENST00000507533 SH3BGRL3Q9H299 93 aa9.43□□□□□ -0.9
DDR1-260ENST00000507533 IGLV5-52A0A0A0MRZ9 124 aa9.42□□□□□ -0.9
DDR1-260ENST00000507533 KANTRA0A1W2PQU2 76 aa9.42□□□□□ -0.9
DDR1-260ENST00000507533 C1QBP02746 253 aa9.42□□□□□ -0.9
DDR1-260ENST00000507533 PDE6HQ13956 83 aa9.42□□□□□ -0.9
DDR1-260ENST00000507533 KHDC3LQ587J8 217 aa9.42□□□□□ -0.9
DDR1-260ENST00000507533 FAM122CQ6P4D5 195 aa9.42□□□□□ -0.9
DDR1-260ENST00000507533 VSIG2Q96IQ7 327 aa9.42□□□□□ -0.9
DDR1-260ENST00000507533 BCL2L11O43521 198 aa9.41□□□□□ -0.9
DDR1-260ENST00000507533 OR7C2O60412 319 aa9.41□□□□□ -0.9
DDR1-260ENST00000507533 NDUFB4O95168 129 aa9.41□□□□□ -0.9
DDR1-260ENST00000507533 NBEAP1P0C6P0 100 aa9.41□□□□□ -0.9
DDR1-260ENST00000507533 PRB4P10163 310 aaPredicted RBP9.41□□□□□ -0.9
DDR1-260ENST00000507533 TMUB2Q71RG4 321 aa9.41□□□□□ -0.9
DDR1-260ENST00000507533 BLNKQ8WV28 456 aa9.41□□□□□ -0.9
DDR1-260ENST00000507533 RPUSD4Q96CM3 377 aaKnown RBP9.41□□□□□ -0.9
DDR1-260ENST00000507533 FXYD5Q96DB9 178 aa9.41□□□□□ -0.9
DDR1-260ENST00000507533 HYLS1Q96M11 299 aa9.41□□□□□ -0.9
DDR1-260ENST00000507533 TMPRSS5Q9H3S3 457 aa9.41□□□□□ -0.9
DDR1-260ENST00000507533 TRAV9-2A0A087WT02 112 aa9.4□□□□□ -0.9
DDR1-260ENST00000507533 H7BYZ3 331 aa9.4□□□□□ -0.9
DDR1-260ENST00000507533 PFDN1O60925 122 aa9.4□□□□□ -0.9
DDR1-260ENST00000507533 EIF3GO75821 320 aaKnown RBP eCLIP9.4□□□□□ -0.9
DDR1-260ENST00000507533 OR10J4P0C629 311 aa9.4□□□□□ -0.9
DDR1-260ENST00000507533 CDC34P49427 236 aaPredicted RBP9.4□□□□□ -0.9
DDR1-260ENST00000507533 LGALSLQ3ZCW2 172 aaPredicted RBP9.4□□□□□ -0.9
DDR1-260ENST00000507533 PQLC2Q6ZP29 291 aa9.4□□□□□ -0.9
DDR1-260ENST00000507533 CCDC28AQ8IWP9 274 aa9.4□□□□□ -0.9
DDR1-260ENST00000507533 OR8A1Q8NGG7 326 aa9.4□□□□□ -0.9
DDR1-260ENST00000507533 ZNF471Q9BX82 626 aaPredicted RBP9.4□□□□□ -0.9
DDR1-260ENST00000507533 ACTR3CQ9C0K3 210 aaPredicted RBP9.4□□□□□ -0.9
DDR1-260ENST00000507533 FAM30AQ9NZY2 134 aa9.4□□□□□ -0.9
DDR1-260ENST00000507533 PRELID1Q9Y255 219 aa9.4□□□□□ -0.9
DDR1-260ENST00000507533 SNURFLB1AK76 121 aa9.39□□□□□ -0.91
DDR1-260ENST00000507533 NPIPB6E9PJ23 425 aa9.39□□□□□ -0.91
DDR1-260ENST00000507533 STAG3L2P0CL84 134 aa9.39□□□□□ -0.91
DDR1-260ENST00000507533 STAG3L3P0CL85 134 aa9.39□□□□□ -0.91
DDR1-260ENST00000507533 CDKN1BP46527 198 aa9.39□□□□□ -0.91
DDR1-260ENST00000507533 EIF5AP63241 154 aaKnown RBP9.39□□□□□ -0.91
DDR1-260ENST00000507533 UBE2L3P68036 154 aaKnown RBP9.39□□□□□ -0.91
DDR1-260ENST00000507533 AKR1C8PQ5T2L2 129 aa9.39□□□□□ -0.91
DDR1-260ENST00000507533 LINC00528Q8N1L1 170 aa9.39□□□□□ -0.91
DDR1-260ENST00000507533 RAB24Q969Q5 203 aa9.39□□□□□ -0.91
DDR1-260ENST00000507533 MRPL53Q96EL3 112 aaKnown RBP9.39□□□□□ -0.91
DDR1-260ENST00000507533 MSRB1Q9NZV6 116 aa9.39□□□□□ -0.91
DDR1-260ENST00000507533 HMGB3O15347 200 aaKnown RBP9.38□□□□□ -0.91
DDR1-260ENST00000507533 CD300CQ08708 224 aa9.38□□□□□ -0.91
DDR1-260ENST00000507533 NTN5Q8WTR8 489 aaPredicted RBP9.38□□□□□ -0.91
DDR1-260ENST00000507533 AAMDCQ9H7C9 122 aa9.38□□□□□ -0.91
DDR1-260ENST00000507533 PRAC2D3DTV9 90 aa9.37□□□□□ -0.91
DDR1-260ENST00000507533 M0R3E3 92 aa9.37□□□□□ -0.91
DDR1-260ENST00000507533 SEC11BP0C7V7 166 aa9.37□□□□□ -0.91
DDR1-260ENST00000507533 Q6ZTI0 123 aa9.37□□□□□ -0.91
DDR1-260ENST00000507533 EXOC3-AS1Q8N2X6 119 aa9.37□□□□□ -0.91
DDR1-260ENST00000507533 PHYHIPLQ96FC7 376 aa9.37□□□□□ -0.91
DDR1-260ENST00000507533 C20orf144Q9BQM9 153 aa9.37□□□□□ -0.91
DDR1-260ENST00000507533 LY96Q9Y6Y9 160 aa9.37□□□□□ -0.91
DDR1-260ENST00000507533 CTXND1A0A1B0GTU2 59 aa9.36□□□□□ -0.91
DDR1-260ENST00000507533 OXTP01178 125 aa9.36□□□□□ -0.91
DDR1-260ENST00000507533 ARL14EPLP0DKL9 152 aa9.36□□□□□ -0.91
DDR1-260ENST00000507533 TPT1P13693 172 aaKnown RBP9.36□□□□□ -0.91
DDR1-260ENST00000507533 RANP62826 216 aaKnown RBP9.36□□□□□ -0.91
DDR1-260ENST00000507533 KIR3DS1Q14943 382 aa9.36□□□□□ -0.91
DDR1-260ENST00000507533 ZFP69Q49AA0 526 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms