RNA–Protein interactions for RNA: ENST00000506924.1

CLCN3-205, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 567 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-205ENST00000506924 RPL36ALQ969Q0 106 aaKnown RBP6.81□□□□□ -1.32
CLCN3-205ENST00000506924 IGF2BP2-AS1Q96M15 143 aa6.81□□□□□ -1.32
CLCN3-205ENST00000506924 VGLL1Q99990 258 aa6.81□□□□□ -1.32
CLCN3-205ENST00000506924 ACTR3CQ9C0K3 210 aaPredicted RBP6.81□□□□□ -1.32
CLCN3-205ENST00000506924 GOLT1BQ9Y3E0 138 aa6.81□□□□□ -1.32
CLCN3-205ENST00000506924 CSMD3Q7Z407 3707 aa6.81□□□□□ -1.32
CLCN3-205ENST00000506924 KANTRA0A1W2PQU2 76 aa6.8□□□□□ -1.32
CLCN3-205ENST00000506924 PGPA6NDG6 321 aa6.8□□□□□ -1.32
CLCN3-205ENST00000506924 PFDN1O60925 122 aa6.8□□□□□ -1.32
CLCN3-205ENST00000506924 MBP02144 154 aa6.8□□□□□ -1.32
CLCN3-205ENST00000506924 FGF8P55075 233 aaPredicted RBP6.8□□□□□ -1.32
CLCN3-205ENST00000506924 ZNF345Q14585 488 aa6.8□□□□□ -1.32
CLCN3-205ENST00000506924 ZNF726P1Q15940 193 aa6.8□□□□□ -1.32
CLCN3-205ENST00000506924 AKR1C8PQ5T2L2 129 aa6.8□□□□□ -1.32
CLCN3-205ENST00000506924 PQLC2Q6ZP29 291 aa6.8□□□□□ -1.32
CLCN3-205ENST00000506924 TMUB2Q71RG4 321 aa6.8□□□□□ -1.32
CLCN3-205ENST00000506924 MRPL53Q96EL3 112 aaKnown RBP6.8□□□□□ -1.32
CLCN3-205ENST00000506924 ZNF471Q9BX82 626 aaPredicted RBP6.8□□□□□ -1.32
CLCN3-205ENST00000506924 AGPAT4-IT1Q9H0P7 198 aa6.8□□□□□ -1.32
CLCN3-205ENST00000506924 C11orf68Q9H3H3 251 aaKnown RBP6.8□□□□□ -1.32
CLCN3-205ENST00000506924 CELA1Q9UNI1 258 aa6.8□□□□□ -1.32
CLCN3-205ENST00000506924 PRELID1Q9Y255 219 aa6.8□□□□□ -1.32
CLCN3-205ENST00000506924 STARD9Q9P2P6 4700 aa6.79□□□□□ -1.32
CLCN3-205ENST00000506924 A0A0D9SG52 128 aa6.79□□□□□ -1.32
CLCN3-205ENST00000506924 BCL2L11O43521 198 aa6.79□□□□□ -1.32
CLCN3-205ENST00000506924 AMBPP02760 352 aa6.79□□□□□ -1.32
CLCN3-205ENST00000506924 STAG3L2P0CL84 134 aa6.79□□□□□ -1.32
CLCN3-205ENST00000506924 STAG3L3P0CL85 134 aa6.79□□□□□ -1.32
CLCN3-205ENST00000506924 AZU1P20160 251 aa6.79□□□□□ -1.32
CLCN3-205ENST00000506924 GCHFRP30047 84 aa6.79□□□□□ -1.32
CLCN3-205ENST00000506924 CDKN1BP46527 198 aa6.79□□□□□ -1.32
CLCN3-205ENST00000506924 FHITP49789 147 aa6.79□□□□□ -1.32
CLCN3-205ENST00000506924 GNG5P63218 68 aa6.79□□□□□ -1.32
CLCN3-205ENST00000506924 GFI1BQ5VTD9 330 aa6.79□□□□□ -1.32
CLCN3-205ENST00000506924 AKAP14Q86UN6 197 aa6.79□□□□□ -1.32
CLCN3-205ENST00000506924 TCTE3Q8IZS6 198 aa6.79□□□□□ -1.32
CLCN3-205ENST00000506924 Q8TAT8 98 aa6.79□□□□□ -1.32
CLCN3-205ENST00000506924 LINC01587Q99440 93 aa6.79□□□□□ -1.32
CLCN3-205ENST00000506924 TRAV12-3A0A0B4J271 114 aa6.78□□□□□ -1.32
CLCN3-205ENST00000506924 A0A1B0GV50 99 aa6.78□□□□□ -1.32
CLCN3-205ENST00000506924 CXorf1O96002 111 aa6.78□□□□□ -1.32
CLCN3-205ENST00000506924 HBE1P02100 147 aa6.78□□□□□ -1.32
CLCN3-205ENST00000506924 TSPOP30536 169 aa6.78□□□□□ -1.32
CLCN3-205ENST00000506924 LEPP41159 167 aa6.78□□□□□ -1.32
CLCN3-205ENST00000506924 CSN1S1P47710 185 aa6.78□□□□□ -1.32
CLCN3-205ENST00000506924 TWIST1Q15672 202 aa6.78□□□□□ -1.32
CLCN3-205ENST00000506924 RRN3P1Q2M238 152 aa6.78□□□□□ -1.32
CLCN3-205ENST00000506924 LGALSLQ3ZCW2 172 aaPredicted RBP6.78□□□□□ -1.32
CLCN3-205ENST00000506924 Q6ZQT7 251 aa6.78□□□□□ -1.32
CLCN3-205ENST00000506924 CMTM2Q8TAZ6 248 aa6.78□□□□□ -1.32
CLCN3-205ENST00000506924 PHLDA1Q8WV24 401 aaPredicted RBP6.78□□□□□ -1.32
CLCN3-205ENST00000506924 SGK494Q96LW2 274 aa6.78□□□□□ -1.32
CLCN3-205ENST00000506924 OTORQ9NRC9 128 aa6.78□□□□□ -1.32
CLCN3-205ENST00000506924 CTXND1A0A1B0GTU2 59 aa6.77□□□□□ -1.33
CLCN3-205ENST00000506924 SMIM9A6NGZ8 99 aa6.77□□□□□ -1.33
CLCN3-205ENST00000506924 C1QBP02746 253 aa6.77□□□□□ -1.33
CLCN3-205ENST00000506924 SLC25A5P05141 298 aaKnown RBP6.77□□□□□ -1.33
CLCN3-205ENST00000506924 RNASE4P34096 147 aaKnown RBP6.77□□□□□ -1.33
CLCN3-205ENST00000506924 UBE2G2P60604 165 aa6.77□□□□□ -1.33
CLCN3-205ENST00000506924 BTN1A1Q13410 526 aa6.77□□□□□ -1.33
CLCN3-205ENST00000506924 TMEM78Q5T7P6 136 aa6.77□□□□□ -1.33
CLCN3-205ENST00000506924 C9orf47Q6ZRZ4 202 aa6.77□□□□□ -1.33
CLCN3-205ENST00000506924 GOLT1AQ6ZVE7 132 aa6.77□□□□□ -1.33
CLCN3-205ENST00000506924 LYPD1Q8N2G4 141 aa6.77□□□□□ -1.33
CLCN3-205ENST00000506924 LINC00477Q96M19 166 aa6.77□□□□□ -1.33
CLCN3-205ENST00000506924 KRTAP17-1Q9BYP8 105 aa6.77□□□□□ -1.33
CLCN3-205ENST00000506924 TRAV8-1A0A0A6YYK1 113 aa6.76□□□□□ -1.33
CLCN3-205ENST00000506924 ZNF138P52744 262 aa6.76□□□□□ -1.33
CLCN3-205ENST00000506924 C12orf74Q32Q52 190 aa6.76□□□□□ -1.33
CLCN3-205ENST00000506924 FAM74A1Q5RGS3 127 aa6.76□□□□□ -1.33
CLCN3-205ENST00000506924 PRR9Q5T870 116 aa6.76□□□□□ -1.33
CLCN3-205ENST00000506924 FAM222AQ5U5X8 452 aa6.76□□□□□ -1.33
CLCN3-205ENST00000506924 CEMP1Q6PRD7 247 aaPredicted RBP6.76□□□□□ -1.33
CLCN3-205ENST00000506924 Q6ZTC4 211 aa6.76□□□□□ -1.33
CLCN3-205ENST00000506924 FAM213BQ8TBF2 198 aa6.76□□□□□ -1.33
CLCN3-205ENST00000506924 RXFP4Q8TDU9 374 aa6.76□□□□□ -1.33
CLCN3-205ENST00000506924 TMED6Q8WW62 240 aa6.76□□□□□ -1.33
CLCN3-205ENST00000506924 FAM19A4Q96LR4 140 aa6.76□□□□□ -1.33
CLCN3-205ENST00000506924 ZNF492Q9P255 531 aa6.76□□□□□ -1.33
CLCN3-205ENST00000506924 YTHDF2Q9Y5A9 579 aaKnown RBP6.76□□□□□ -1.33
CLCN3-205ENST00000506924 C7orf71A4D174 169 aa6.75□□□□□ -1.33
CLCN3-205ENST00000506924 MAP1LC3B2A6NCE7 125 aa6.75□□□□□ -1.33
CLCN3-205ENST00000506924 GGTLC3B5MD39 225 aa6.75□□□□□ -1.33
CLCN3-205ENST00000506924 GPX1P07203 203 aa6.75□□□□□ -1.33
CLCN3-205ENST00000506924 SEC11BP0C7V7 166 aa6.75□□□□□ -1.33
CLCN3-205ENST00000506924 SPART-AS1P0CW21 52 aa6.75□□□□□ -1.33
CLCN3-205ENST00000506924 TPT1P13693 172 aaKnown RBP6.75□□□□□ -1.33
CLCN3-205ENST00000506924 NKX2-5P52952 324 aaPredicted RBP6.75□□□□□ -1.33
CLCN3-205ENST00000506924 TAS2R60P59551 318 aa6.75□□□□□ -1.33
CLCN3-205ENST00000506924 ZFAND2AQ8N6M9 145 aa6.75□□□□□ -1.33
CLCN3-205ENST00000506924 SUN5Q8TC36 379 aa6.75□□□□□ -1.33
CLCN3-205ENST00000506924 ODF3Q96PU9 254 aa6.75□□□□□ -1.33
CLCN3-205ENST00000506924 MAP1LC3BQ9GZQ8 125 aa6.75□□□□□ -1.33
CLCN3-205ENST00000506924 TMEM167BQ9NRX6 74 aa6.75□□□□□ -1.33
CLCN3-205ENST00000506924 TENM2Q9NT68 2774 aa6.74□□□□□ -1.33
CLCN3-205ENST00000506924 TMEM189A5PLL7 270 aa6.74□□□□□ -1.33
CLCN3-205ENST00000506924 RBAKDNA6NC62 111 aa6.74□□□□□ -1.33
CLCN3-205ENST00000506924 NUPR2A6NF83 97 aa6.74□□□□□ -1.33
CLCN3-205ENST00000506924 KLLNB2CW77 178 aa6.74□□□□□ -1.33
CLCN3-205ENST00000506924 H7BYZ3 331 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms