RNA–Protein interactions for RNA: ENST00000505555.5

SDHA-206, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,230 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-206ENST00000505555 SPOCK3Q9BQ16 436 aa14.91□□□□□ -0.02
SDHA-206ENST00000505555 SELENOKQ9Y6D0 94 aa14.91□□□□□ -0.02
SDHA-206ENST00000505555 B4DSR2 109 aa14.9□□□□□ -0.02
SDHA-206ENST00000505555 NCR2O95944 276 aa14.9□□□□□ -0.02
SDHA-206ENST00000505555 CENPEQ02224 2701 aa14.9□□□□□ -0.02
SDHA-206ENST00000505555 PMCHL2Q9BQD1 86 aa14.9□□□□□ -0.02
SDHA-206ENST00000505555 MAP1LC3CQ9BXW4 147 aa14.9□□□□□ -0.02
SDHA-206ENST00000505555 IGKV3D-20A0A0C4DH25 116 aa14.9□□□□□ -0.02
SDHA-206ENST00000505555 FXYD7P58549 80 aa14.9□□□□□ -0.02
SDHA-206ENST00000505555 ATP6V0BQ99437 205 aa14.9□□□□□ -0.02
SDHA-206ENST00000505555 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.9□□□□□ -0.022e-6■■■■□ 19.8
SDHA-206ENST00000505555 hDV102S1A0JD36 115 aa14.89□□□□□ -0.03
SDHA-206ENST00000505555 SRSF2Q01130 221 aaKnown RBP14.89□□□□□ -0.03
SDHA-206ENST00000505555 LINC01559Q495D7 138 aa14.89□□□□□ -0.03
SDHA-206ENST00000505555 HSPB8Q9UJY1 196 aa14.89□□□□□ -0.03
SDHA-206ENST00000505555 FOSL1P15407 271 aa14.89□□□□□ -0.03
SDHA-206ENST00000505555 CKS2P33552 79 aa14.89□□□□□ -0.03
SDHA-206ENST00000505555 MAPK1IP1LQ8NDC0 245 aa14.89□□□□□ -0.03
SDHA-206ENST00000505555 OR4X2Q8NGF9 303 aa14.89□□□□□ -0.03
SDHA-206ENST00000505555 TP73-AS1Q9UF72 201 aa14.89□□□□□ -0.03
SDHA-206ENST00000505555 DEFB1P60022 68 aa14.88□□□□□ -0.03
SDHA-206ENST00000505555 GPHB5Q86YW7 130 aa14.88□□□□□ -0.03
SDHA-206ENST00000505555 ZANQ9Y493 2812 aa14.88□□□□□ -0.03
SDHA-206ENST00000505555 USP24Q9UPU5 2620 aa14.88□□□□□ -0.03
SDHA-206ENST00000505555 NDUFA4O00483 81 aa14.88□□□□□ -0.03
SDHA-206ENST00000505555 GAS8-AS1O95177 125 aa14.88□□□□□ -0.03
SDHA-206ENST00000505555 NPYP01303 97 aa14.88□□□□□ -0.03
SDHA-206ENST00000505555 FOXE3Q13461 319 aa14.88□□□□□ -0.03
SDHA-206ENST00000505555 TMEM95Q3KNT9 176 aa14.88□□□□□ -0.03
SDHA-206ENST00000505555 MRPL53Q96EL3 112 aaKnown RBP14.88□□□□□ -0.03
SDHA-206ENST00000505555 USMG5Q96IX5 58 aa14.88□□□□□ -0.03
SDHA-206ENST00000505555 ST20Q9HBF5 79 aa14.88□□□□□ -0.03
SDHA-206ENST00000505555 A0A096LNJ9 63 aa14.87□□□□□ -0.03
SDHA-206ENST00000505555 PET117Q6UWS5 81 aa14.87□□□□□ -0.03
SDHA-206ENST00000505555 C9orf47Q6ZRZ4 202 aa14.87□□□□□ -0.03
SDHA-206ENST00000505555 ZNF747Q9BV97 191 aa14.87□□□□□ -0.03
SDHA-206ENST00000505555 POLQO75417 2590 aa14.87□□□□□ -0.03
SDHA-206ENST00000505555 ZNF462Q96JM2 2506 aa14.87□□□□□ -0.03
SDHA-206ENST00000505555 HINT1P49773 126 aaPredicted RBP14.86□□□□□ -0.03
SDHA-206ENST00000505555 PRSS57Q6UWY2 283 aa14.86□□□□□ -0.03
SDHA-206ENST00000505555 ZNF738Q8NE65 137 aa14.86□□□□□ -0.03
SDHA-206ENST00000505555 OR10AG1Q8NH19 301 aa14.86□□□□□ -0.03
SDHA-206ENST00000505555 RNF185Q96GF1 192 aa14.86□□□□□ -0.03
SDHA-206ENST00000505555 TMEM191AQ9H0A3 160 aa14.86□□□□□ -0.03
SDHA-206ENST00000505555 CSPG4Q6UVK1 2322 aa14.86□□□□□ -0.03
SDHA-206ENST00000505555 IGKV3-7A0A075B6H7 116 aa14.86□□□□□ -0.03
SDHA-206ENST00000505555 J3KRW8 73 aa14.86□□□□□ -0.03
SDHA-206ENST00000505555 RPL11P62913 178 aaKnown RBP14.86□□□□□ -0.03
SDHA-206ENST00000505555 BBC3Q96PG8 261 aaPredicted RBP14.86□□□□□ -0.03
SDHA-206ENST00000505555 CNFNQ9BYD5 112 aa14.86□□□□□ -0.03
SDHA-206ENST00000505555 HIST1H1AQ02539 215 aaPredicted RBP14.85□□□□□ -0.03
SDHA-206ENST00000505555 IGHV4-59P01825 116 aa14.85□□□□□ -0.03
SDHA-206ENST00000505555 TM4SF20Q53R12 229 aa14.85□□□□□ -0.03
SDHA-206ENST00000505555 PRR9Q5T870 116 aa14.85□□□□□ -0.03
SDHA-206ENST00000505555 NPFFR1Q9GZQ6 430 aa14.85□□□□□ -0.03
SDHA-206ENST00000505555 A1L4Q6 167 aa14.84□□□□□ -0.03
SDHA-206ENST00000505555 H3BUA1 57 aa14.84□□□□□ -0.03
SDHA-206ENST00000505555 IGLV1-40P01703 118 aa14.84□□□□□ -0.03
SDHA-206ENST00000505555 DEFB112Q30KQ8 113 aa14.84□□□□□ -0.03
SDHA-206ENST00000505555 C9orf139Q6ZV77 190 aa14.84□□□□□ -0.03
SDHA-206ENST00000505555 USP9YO00507 2555 aaPredicted RBP14.83□□□□□ -0.03
SDHA-206ENST00000505555 BRI3O95415 125 aa14.83□□□□□ -0.04
SDHA-206ENST00000505555 EDN2P20800 178 aa14.83□□□□□ -0.04
SDHA-206ENST00000505555 DSCR9P59020 149 aa14.83□□□□□ -0.04
SDHA-206ENST00000505555 OR8A1Q8NGG7 326 aa14.83□□□□□ -0.04
SDHA-206ENST00000505555 FAM208BQ5VWN6 2430 aa14.83□□□□□ -0.04
SDHA-206ENST00000505555 GATA1P15976 413 aaPredicted RBP14.82□□□□□ -0.04
SDHA-206ENST00000505555 LINC01545Q5VT33 79 aa14.82□□□□□ -0.04
SDHA-206ENST00000505555 ORAOV1Q8WV07 137 aa14.82□□□□□ -0.04
SDHA-206ENST00000505555 SOCS3O14543 225 aa14.82□□□□□ -0.04
SDHA-206ENST00000505555 SRD5A1P18405 259 aa14.81□□□□□ -0.04
SDHA-206ENST00000505555 EVI2AP22794 236 aa14.81□□□□□ -0.04
SDHA-206ENST00000505555 CFHR3Q02985 330 aa14.81□□□□□ -0.04
SDHA-206ENST00000505555 C10orf99Q6UWK7 81 aa14.81□□□□□ -0.04
SDHA-206ENST00000505555 LINC01356Q8N9X3 169 aa14.81□□□□□ -0.04
SDHA-206ENST00000505555 IGHV7-4-1A0A0J9YVY3 117 aa14.81□□□□□ -0.04
SDHA-206ENST00000505555 F6UB75 175 aa14.81□□□□□ -0.04
SDHA-206ENST00000505555 ANKRD17O75179 2603 aaKnown RBP14.81□□□□□ -0.04
SDHA-206ENST00000505555 RHPN1-AS1Q9BWJ2 59 aa14.81□□□□□ -0.04
SDHA-206ENST00000505555 LRRK2Q5S007 2527 aa14.8□□□□□ -0.04
SDHA-206ENST00000505555 A0A0G2JLM5 398 aa14.8□□□□□ -0.04
SDHA-206ENST00000505555 TCF21O43680 179 aa14.8□□□□□ -0.04
SDHA-206ENST00000505555 TGFAP01135 160 aa14.8□□□□□ -0.04
SDHA-206ENST00000505555 SLC25A16P16260 332 aa14.8□□□□□ -0.04
SDHA-206ENST00000505555 GATA3P23771 443 aa14.8□□□□□ -0.04
SDHA-206ENST00000505555 SCRT2Q9NQ03 307 aa14.8□□□□□ -0.04
SDHA-206ENST00000505555 A0A096LNT2 108 aa14.8□□□□□ -0.04
SDHA-206ENST00000505555 SRSF1Q07955 248 aaKnown RBP eCLIP14.8□□□□□ -0.04
SDHA-206ENST00000505555 PPP1R14DQ9NXH3 145 aa14.8□□□□□ -0.04
SDHA-206ENST00000505555 HSBP1L1C9JCN9 74 aa14.79□□□□□ -0.04
SDHA-206ENST00000505555 MS4A6AQ9H2W1 248 aa14.79□□□□□ -0.04
SDHA-206ENST00000505555 SPRY2O43597 315 aa14.78□□□□□ -0.04
SDHA-206ENST00000505555 COX6B1P14854 86 aa14.78□□□□□ -0.04
SDHA-206ENST00000505555 WFDC3Q8IUB2 231 aa14.78□□□□□ -0.04
SDHA-206ENST00000505555 OR10J6PQ8NGY7 276 aa14.78□□□□□ -0.04
SDHA-206ENST00000505555 COX11Q9Y6N1 276 aa14.78□□□□□ -0.04
SDHA-206ENST00000505555 TNFRSF6BO95407 300 aa14.78□□□□□ -0.04
SDHA-206ENST00000505555 SLC25A34Q6PIV7 304 aa14.78□□□□□ -0.04
SDHA-206ENST00000505555 Q6ZVH6 145 aa14.78□□□□□ -0.04
SDHA-206ENST00000505555 UBR5O95071 2799 aaPredicted RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms