RNA–Protein interactions for RNA: ENST00000505458.5

NFKB1-205, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-205ENST00000505458 Q6ZS46 218 aa8.61□□□□□ -1.03
NFKB1-205ENST00000505458 OR8A1Q8NGG7 326 aa8.61□□□□□ -1.03
NFKB1-205ENST00000505458 TMSB15BA0A087X1C1 80 aa8.61□□□□□ -1.03
NFKB1-205ENST00000505458 HOXA3O43365 443 aaPredicted RBP8.61□□□□□ -1.03
NFKB1-205ENST00000505458 RPL11P62913 178 aaKnown RBP8.61□□□□□ -1.03
NFKB1-205ENST00000505458 PRELID3AQ96N28 172 aa8.61□□□□□ -1.03
NFKB1-205ENST00000505458 SNAI2O43623 268 aa8.6□□□□□ -1.03
NFKB1-205ENST00000505458 C3orf79P0CE67 100 aa8.6□□□□□ -1.03
NFKB1-205ENST00000505458 SNRPD3P62318 126 aaKnown RBP8.6□□□□□ -1.03
NFKB1-205ENST00000505458 KRTAP1-3Q8IUG1 177 aa8.6□□□□□ -1.03
NFKB1-205ENST00000505458 TMEM70Q9BUB7 260 aa8.6□□□□□ -1.03
NFKB1-205ENST00000505458 TRAV2A0A0B4J234 112 aa8.6□□□□□ -1.03
NFKB1-205ENST00000505458 OR10AG1Q8NH19 301 aa8.6□□□□□ -1.03
NFKB1-205ENST00000505458 PRSS3P2Q8NHM4 247 aa8.6□□□□□ -1.03
NFKB1-205ENST00000505458 LEPROTL1O95214 131 aa8.6□□□□□ -1.03
NFKB1-205ENST00000505458 PLA2G2AP14555 144 aa8.6□□□□□ -1.03
NFKB1-205ENST00000505458 LEPP41159 167 aa8.6□□□□□ -1.03
NFKB1-205ENST00000505458 TM4SF20Q53R12 229 aa8.6□□□□□ -1.03
NFKB1-205ENST00000505458 CRXO43186 299 aaPredicted RBP8.59□□□□□ -1.03
NFKB1-205ENST00000505458 PET117Q6UWS5 81 aa8.59□□□□□ -1.03
NFKB1-205ENST00000505458 FAM19A4Q96LR4 140 aa8.59□□□□□ -1.03
NFKB1-205ENST00000505458 FOXC2Q99958 501 aa8.59□□□□□ -1.03
NFKB1-205ENST00000505458 Q71RC1 249 aaPredicted RBP8.59□□□□□ -1.03
NFKB1-205ENST00000505458 PRO1933Q9H354 126 aa8.59□□□□□ -1.03
NFKB1-205ENST00000505458 RELNP78509 3460 aa8.59□□□□□ -1.03
NFKB1-205ENST00000505458 ZFYVE26Q68DK2 2539 aa8.59□□□□□ -1.03
NFKB1-205ENST00000505458 CKS2P33552 79 aa8.59□□□□□ -1.03
NFKB1-205ENST00000505458 MAP1LC3CQ9BXW4 147 aa8.59□□□□□ -1.03
NFKB1-205ENST00000505458 IGHV1-24A0A0C4DH33 117 aa8.58□□□□□ -1.04
NFKB1-205ENST00000505458 DUSP14O95147 198 aaKnown RBP8.58□□□□□ -1.04
NFKB1-205ENST00000505458 TMEM95Q3KNT9 176 aa8.58□□□□□ -1.04
NFKB1-205ENST00000505458 FAM19A2Q8N3H0 131 aa8.58□□□□□ -1.04
NFKB1-205ENST00000505458 MAPK1IP1LQ8NDC0 245 aa8.58□□□□□ -1.04
NFKB1-205ENST00000505458 MAP1LC3AQ9H492 121 aa8.58□□□□□ -1.04
NFKB1-205ENST00000505458 PEMTQ9UBM1 199 aa8.58□□□□□ -1.04
NFKB1-205ENST00000505458 CREBBPQ92793 2442 aa8.58□□□□□ -1.04
NFKB1-205ENST00000505458 TMEM213A2RRL7 107 aa8.58□□□□□ -1.04
NFKB1-205ENST00000505458 RPLP1P05386 114 aaKnown RBP8.58□□□□□ -1.04
NFKB1-205ENST00000505458 TSPOP30536 169 aa8.58□□□□□ -1.04
NFKB1-205ENST00000505458 MRPL51Q4U2R6 128 aaKnown RBP8.58□□□□□ -1.04
NFKB1-205ENST00000505458 C20orf173Q96LM9 149 aa8.58□□□□□ -1.04
NFKB1-205ENST00000505458 NXT2Q9NPJ8 142 aaKnown RBP8.58□□□□□ -1.04
NFKB1-205ENST00000505458 IGKV3D-20A0A0C4DH25 116 aa8.58□□□□□ -1.04
NFKB1-205ENST00000505458 ASIPP42127 132 aa8.58□□□□□ -1.04
NFKB1-205ENST00000505458 ZFAND2AQ8N6M9 145 aa8.58□□□□□ -1.04
NFKB1-205ENST00000505458 D6R8Y8 96 aa8.57□□□□□ -1.04
NFKB1-205ENST00000505458 URB1-AS1Q96HZ7 61 aa8.57□□□□□ -1.04
NFKB1-205ENST00000505458 TCF21O43680 179 aa8.57□□□□□ -1.04
NFKB1-205ENST00000505458 DCANP1Q8TF63 244 aa8.57□□□□□ -1.04
NFKB1-205ENST00000505458 C4orf3Q8WVX3 66 aa8.57□□□□□ -1.04
NFKB1-205ENST00000505458 MIEN1Q9BRT3 115 aa8.57□□□□□ -1.04
NFKB1-205ENST00000505458 CSPG4Q6UVK1 2322 aa8.57□□□□□ -1.04
NFKB1-205ENST00000505458 NAV2Q8IVL1 2488 aa8.57□□□□□ -1.04
NFKB1-205ENST00000505458 PPP1R17O96001 155 aa8.57□□□□□ -1.04
NFKB1-205ENST00000505458 PSMG4Q5JS54 123 aa8.57□□□□□ -1.04
NFKB1-205ENST00000505458 AMN1Q8IY45 258 aa8.57□□□□□ -1.04
NFKB1-205ENST00000505458 DEFB125Q8N687 156 aa8.57□□□□□ -1.04
NFKB1-205ENST00000505458 Q8N976 141 aa8.57□□□□□ -1.04
NFKB1-205ENST00000505458 MRAP2Q96G30 205 aa8.57□□□□□ -1.04
NFKB1-205ENST00000505458 TACC2O95359 2948 aa8.57□□□□□ -1.04
NFKB1-205ENST00000505458 C2orf70A6NJV1 201 aa8.56□□□□□ -1.04
NFKB1-205ENST00000505458 FOSL1P15407 271 aa8.56□□□□□ -1.04
NFKB1-205ENST00000505458 EBLN2Q6P2I7 272 aa8.56□□□□□ -1.04
NFKB1-205ENST00000505458 SPATA12Q7Z6I5 190 aa8.56□□□□□ -1.04
NFKB1-205ENST00000505458 CD5LO43866 347 aa8.56□□□□□ -1.04
NFKB1-205ENST00000505458 SPANXN1Q5VSR9 72 aa8.56□□□□□ -1.04
NFKB1-205ENST00000505458 LINC01546A6NGU7 62 aa8.56□□□□□ -1.04
NFKB1-205ENST00000505458 LCNL1Q6ZST4 164 aa8.56□□□□□ -1.04
NFKB1-205ENST00000505458 LINC01619G3V211 115 aa8.55□□□□□ -1.04
NFKB1-205ENST00000505458 K7EQG2 157 aa8.55□□□□□ -1.04
NFKB1-205ENST00000505458 PTPN13Q12923 2485 aa8.55□□□□□ -1.04
NFKB1-205ENST00000505458 TRAV9-2A0A087WT02 112 aa8.55□□□□□ -1.04
NFKB1-205ENST00000505458 PRSS47A8MTI9 375 aa8.55□□□□□ -1.04
NFKB1-205ENST00000505458 KLLNB2CW77 178 aa8.55□□□□□ -1.04
NFKB1-205ENST00000505458 SYS1-DBNDD2H3BUS1 97 aa8.55□□□□□ -1.04
NFKB1-205ENST00000505458 S100A4P26447 101 aaKnown RBP8.55□□□□□ -1.04
NFKB1-205ENST00000505458 HOXD3P31249 432 aaPredicted RBP8.55□□□□□ -1.04
NFKB1-205ENST00000505458 DPF1Q92782 380 aa8.55□□□□□ -1.04
NFKB1-205ENST00000505458 C14orf144Q96I85 54 aa8.55□□□□□ -1.04
NFKB1-205ENST00000505458 MS4A6AQ9H2W1 248 aa8.55□□□□□ -1.04
NFKB1-205ENST00000505458 TMEM160Q9NX00 188 aa8.55□□□□□ -1.04
NFKB1-205ENST00000505458 UQCR10Q9UDW1 63 aa8.55□□□□□ -1.04
NFKB1-205ENST00000505458 HSBP1L1C9JCN9 74 aa8.54□□□□□ -1.04
NFKB1-205ENST00000505458 K7EMI3 77 aa8.54□□□□□ -1.04
NFKB1-205ENST00000505458 HBDP02042 147 aa8.54□□□□□ -1.04
NFKB1-205ENST00000505458 SIGLEC8Q9NYZ4 499 aa8.54□□□□□ -1.04
NFKB1-205ENST00000505458 EPG5Q9HCE0 2579 aa8.54□□□□□ -1.04
NFKB1-205ENST00000505458 IGHV4OR15-8A0A075B7B6 117 aa8.54□□□□□ -1.04
NFKB1-205ENST00000505458 A0A087WW49 117 aa8.54□□□□□ -1.04
NFKB1-205ENST00000505458 SPATA45Q537H7 98 aa8.54□□□□□ -1.04
NFKB1-205ENST00000505458 FOXI2Q6ZQN5 318 aa8.54□□□□□ -1.04
NFKB1-205ENST00000505458 C11orf21Q9P2W6 132 aa8.54□□□□□ -1.04
NFKB1-205ENST00000505458 RNF185Q96GF1 192 aa8.54□□□□□ -1.04
NFKB1-205ENST00000505458 M0R381 172 aa8.53□□□□□ -1.04
NFKB1-205ENST00000505458 CSN3P07498 182 aa8.53□□□□□ -1.04
NFKB1-205ENST00000505458 ZNF705AQ6ZN79 300 aaPredicted RBP8.53□□□□□ -1.04
NFKB1-205ENST00000505458 ZNF575Q86XF7 245 aa8.53□□□□□ -1.04
NFKB1-205ENST00000505458 ST20Q9HBF5 79 aa8.53□□□□□ -1.04
NFKB1-205ENST00000505458 PAM16Q9Y3D7 125 aa8.53□□□□□ -1.04
NFKB1-205ENST00000505458 USP9YO00507 2555 aaPredicted RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms