RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 OR10J6PQ8NGY7 276 aa5.95□□□□□ -1.46
CDC42SE2-208ENST00000505065 PSG8Q9UQ74 426 aa5.95□□□□□ -1.46
CDC42SE2-208ENST00000505065 SCO2A0A1W2PP80 73 aa5.95□□□□□ -1.46
CDC42SE2-208ENST00000505065 TFPI2P48307 235 aa5.95□□□□□ -1.46
CDC42SE2-208ENST00000505065 ZNF80P51504 273 aaPredicted RBP5.95□□□□□ -1.46
CDC42SE2-208ENST00000505065 C7orf71A4D174 169 aa5.95□□□□□ -1.46
CDC42SE2-208ENST00000505065 C11orf94C9JXX5 98 aa5.95□□□□□ -1.46
CDC42SE2-208ENST00000505065 MIFP14174 115 aa5.95□□□□□ -1.46
CDC42SE2-208ENST00000505065 LINC01559Q495D7 138 aa5.95□□□□□ -1.46
CDC42SE2-208ENST00000505065 IBA57Q5T440 356 aaKnown RBP5.95□□□□□ -1.46
CDC42SE2-208ENST00000505065 RARRES2Q99969 163 aa5.95□□□□□ -1.46
CDC42SE2-208ENST00000505065 PRB2P02812 416 aaPredicted RBP5.95□□□□□ -1.46
CDC42SE2-208ENST00000505065 MED14OSP0DP75 135 aa5.95□□□□□ -1.46
CDC42SE2-208ENST00000505065 SUMO1P63165 101 aaKnown RBP5.95□□□□□ -1.46
CDC42SE2-208ENST00000505065 UQCC3Q6UW78 93 aa5.95□□□□□ -1.46
CDC42SE2-208ENST00000505065 C11orf21Q9P2W6 132 aa5.95□□□□□ -1.46
CDC42SE2-208ENST00000505065 FLI1Q01543 452 aaPredicted RBP5.94□□□□□ -1.46
CDC42SE2-208ENST00000505065 KIR3DS1Q14943 382 aa5.94□□□□□ -1.46
CDC42SE2-208ENST00000505065 FAM231DQ6ZW35 169 aa5.94□□□□□ -1.46
CDC42SE2-208ENST00000505065 C9orf85Q96MD7 179 aa5.94□□□□□ -1.46
CDC42SE2-208ENST00000505065 MGAM2Q2M2H8 2515 aa5.94□□□□□ -1.46
CDC42SE2-208ENST00000505065 TEX46H3BTG2 121 aa5.94□□□□□ -1.46
CDC42SE2-208ENST00000505065 GCGP01275 180 aa5.94□□□□□ -1.46
CDC42SE2-208ENST00000505065 RPL11P62913 178 aaKnown RBP5.94□□□□□ -1.46
CDC42SE2-208ENST00000505065 SRSF3P84103 164 aaKnown RBP5.94□□□□□ -1.46
CDC42SE2-208ENST00000505065 DAZ2Q13117 558 aaKnown RBP5.94□□□□□ -1.46
CDC42SE2-208ENST00000505065 SAPCD1Q5SSQ6 148 aa5.94□□□□□ -1.46
CDC42SE2-208ENST00000505065 LINC00052Q96N35 136 aa5.94□□□□□ -1.46
CDC42SE2-208ENST00000505065 SSBP4Q9BWG4 385 aaPredicted RBP5.94□□□□□ -1.46
CDC42SE2-208ENST00000505065 SACSQ9NZJ4 4579 aa5.93□□□□□ -1.46
CDC42SE2-208ENST00000505065 ZC2HC1AQ96GY0 325 aa5.93□□□□□ -1.46
CDC42SE2-208ENST00000505065 KRBOX1C9JBD0 128 aa5.93□□□□□ -1.46
CDC42SE2-208ENST00000505065 INSP01308 110 aa5.93□□□□□ -1.46
CDC42SE2-208ENST00000505065 IFNA1P01562 189 aa5.93□□□□□ -1.46
CDC42SE2-208ENST00000505065 UFSP1Q6NVU6 142 aa5.93□□□□□ -1.46
CDC42SE2-208ENST00000505065 GOLT1AQ6ZVE7 132 aa5.93□□□□□ -1.46
CDC42SE2-208ENST00000505065 PYGO2Q9BRQ0 406 aa5.93□□□□□ -1.46
CDC42SE2-208ENST00000505065 CSN1S1P47710 185 aa5.93□□□□□ -1.46
CDC42SE2-208ENST00000505065 FAM74A3Q4VXF1 159 aa5.93□□□□□ -1.46
CDC42SE2-208ENST00000505065 LINC00479Q96M42 142 aa5.93□□□□□ -1.46
CDC42SE2-208ENST00000505065 CNFNQ9BYD5 112 aa5.93□□□□□ -1.46
CDC42SE2-208ENST00000505065 K7EN84 100 aa5.92□□□□□ -1.46
CDC42SE2-208ENST00000505065 PFN1P07737 140 aaKnown RBP5.92□□□□□ -1.46
CDC42SE2-208ENST00000505065 NUTF2P61970 127 aaKnown RBP5.92□□□□□ -1.46
CDC42SE2-208ENST00000505065 HIST1H1AQ02539 215 aaPredicted RBP5.92□□□□□ -1.46
CDC42SE2-208ENST00000505065 C8orf49Q96NF6 230 aa5.92□□□□□ -1.46
CDC42SE2-208ENST00000505065 GNG13Q9P2W3 67 aa5.92□□□□□ -1.46
CDC42SE2-208ENST00000505065 MUC4Q99102 2169 aa5.92□□□□□ -1.46
CDC42SE2-208ENST00000505065 IGKV3-7A0A075B6H7 116 aa5.92□□□□□ -1.46
CDC42SE2-208ENST00000505065 IGHV4-4A0A075B6R2 117 aa5.92□□□□□ -1.46
CDC42SE2-208ENST00000505065 TMEM189A5PLL7 270 aa5.92□□□□□ -1.46
CDC42SE2-208ENST00000505065 H7BYZ3 331 aa5.92□□□□□ -1.46
CDC42SE2-208ENST00000505065 CA1P00915 261 aaPredicted RBP5.92□□□□□ -1.46
CDC42SE2-208ENST00000505065 RPL35P42766 123 aaKnown RBP5.92□□□□□ -1.46
CDC42SE2-208ENST00000505065 Q6ZQT7 251 aa5.92□□□□□ -1.46
CDC42SE2-208ENST00000505065 RCHY1Q96PM5 261 aa5.92□□□□□ -1.46
CDC42SE2-208ENST00000505065 TRAV8-1A0A0A6YYK1 113 aa5.92□□□□□ -1.46
CDC42SE2-208ENST00000505065 SNAI2O43623 268 aa5.92□□□□□ -1.46
CDC42SE2-208ENST00000505065 FOXA3P55318 350 aaPredicted RBP5.92□□□□□ -1.46
CDC42SE2-208ENST00000505065 TMEM78Q5T7P6 136 aa5.92□□□□□ -1.46
CDC42SE2-208ENST00000505065 IQCF2Q8IXL9 164 aa5.92□□□□□ -1.46
CDC42SE2-208ENST00000505065 POM121L12Q8N7R1 296 aa5.92□□□□□ -1.46
CDC42SE2-208ENST00000505065 DERL1Q9BUN8 251 aa5.92□□□□□ -1.46
CDC42SE2-208ENST00000505065 DNAH17Q9UFH2 4485 aa5.92□□□□□ -1.46
CDC42SE2-208ENST00000505065 IGKV3D-20A0A0C4DH25 116 aa5.92□□□□□ -1.46
CDC42SE2-208ENST00000505065 SPINK4O60575 86 aa5.92□□□□□ -1.46
CDC42SE2-208ENST00000505065 TMEM263Q8WUH6 116 aaKnown RBP5.92□□□□□ -1.46
CDC42SE2-208ENST00000505065 NOTCH1P46531 2555 aa5.91□□□□□ -1.46
CDC42SE2-208ENST00000505065 BTN1A1Q13410 526 aa5.91□□□□□ -1.46
CDC42SE2-208ENST00000505065 IGHV3-16A0A0C4DH30 117 aa5.91□□□□□ -1.46
CDC42SE2-208ENST00000505065 M0R2Z0 102 aa5.91□□□□□ -1.46
CDC42SE2-208ENST00000505065 SNRPCP09234 159 aaKnown RBP5.91□□□□□ -1.46
CDC42SE2-208ENST00000505065 UBE2G2P60604 165 aa5.91□□□□□ -1.46
CDC42SE2-208ENST00000505065 SPINK13Q1W4C9 94 aa5.91□□□□□ -1.46
CDC42SE2-208ENST00000505065 ZNF493Q6ZR52 646 aa5.91□□□□□ -1.46
CDC42SE2-208ENST00000505065 Q8TAT8 98 aa5.91□□□□□ -1.46
CDC42SE2-208ENST00000505065 DNAH2Q9P225 4427 aa5.91□□□□□ -1.46
CDC42SE2-208ENST00000505065 CT83Q5H943 113 aa5.91□□□□□ -1.46
CDC42SE2-208ENST00000505065 C16orf74Q96GX8 76 aa5.91□□□□□ -1.46
CDC42SE2-208ENST00000505065 ASCL2Q99929 193 aa5.91□□□□□ -1.46
CDC42SE2-208ENST00000505065 IGLC6P0CF74 106 aa5.9□□□□□ -1.46
CDC42SE2-208ENST00000505065 TCL1AP56279 114 aa5.9□□□□□ -1.46
CDC42SE2-208ENST00000505065 TOR2AQ5JU69 321 aa5.9□□□□□ -1.46
CDC42SE2-208ENST00000505065 GATD1Q8NB37 220 aa5.9□□□□□ -1.46
CDC42SE2-208ENST00000505065 PARLQ9H300 379 aa5.9□□□□□ -1.46
CDC42SE2-208ENST00000505065 TUBA4BQ9H853 241 aa5.9□□□□□ -1.46
CDC42SE2-208ENST00000505065 K7EQM0 130 aa5.9□□□□□ -1.46
CDC42SE2-208ENST00000505065 RPL35AP18077 110 aaKnown RBP5.9□□□□□ -1.46
CDC42SE2-208ENST00000505065 ADCYAP1P18509 176 aa5.9□□□□□ -1.46
CDC42SE2-208ENST00000505065 WDR73Q6P4I2 378 aa5.9□□□□□ -1.46
CDC42SE2-208ENST00000505065 CMTM2Q8TAZ6 248 aa5.9□□□□□ -1.46
CDC42SE2-208ENST00000505065 RNASE3P12724 160 aaKnown RBP5.9□□□□□ -1.47
CDC42SE2-208ENST00000505065 LGALS9BQ3B8N2 356 aa5.9□□□□□ -1.47
CDC42SE2-208ENST00000505065 AZU1P20160 251 aa5.9□□□□□ -1.47
CDC42SE2-208ENST00000505065 RETNQ9HD89 108 aa5.9□□□□□ -1.47
CDC42SE2-208ENST00000505065 U3KQK5 164 aa5.9□□□□□ -1.47
CDC42SE2-208ENST00000505065 TRAV21A0A0B4J279 112 aa5.89□□□□□ -1.47
CDC42SE2-208ENST00000505065 IGHV4-28A0A0C4DH34 117 aa5.89□□□□□ -1.47
CDC42SE2-208ENST00000505065 TEX48A0A1B0GUV7 120 aa5.89□□□□□ -1.47
CDC42SE2-208ENST00000505065 PGPEP1LA6NFU8 196 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms