RNA–Protein interactions for RNA: ENST00000504849.5

RFC1-208, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-208ENST00000504849 LTAP01374 205 aa3.17□□□□□ -1.9
RFC1-208ENST00000504849 IGKV3-15P01624 115 aa3.17□□□□□ -1.9
RFC1-208ENST00000504849 CT45A10P0DMU9 189 aa3.17□□□□□ -1.9
RFC1-208ENST00000504849 FABP2P12104 132 aa3.17□□□□□ -1.9
RFC1-208ENST00000504849 IGHV1-2P23083 117 aa3.17□□□□□ -1.9
RFC1-208ENST00000504849 GPR6P46095 362 aaPredicted RBP3.17□□□□□ -1.9
RFC1-208ENST00000504849 C17orf58Q2M2W7 97 aa3.17□□□□□ -1.9
RFC1-208ENST00000504849 GDF5OSQ5U4N7 250 aa3.17□□□□□ -1.9
RFC1-208ENST00000504849 SAMD13Q5VXD3 122 aa3.17□□□□□ -1.9
RFC1-208ENST00000504849 Q6ZR03 302 aa3.17□□□□□ -1.9
RFC1-208ENST00000504849 Q6ZVH6 145 aa3.17□□□□□ -1.9
RFC1-208ENST00000504849 BHLHA15Q7RTS1 189 aaPredicted RBP3.17□□□□□ -1.9
RFC1-208ENST00000504849 RPRMLQ8N4K4 120 aa3.17□□□□□ -1.9
RFC1-208ENST00000504849 FER1L6-AS1Q8NA97 138 aa3.17□□□□□ -1.9
RFC1-208ENST00000504849 GATD1Q8NB37 220 aa3.17□□□□□ -1.9
RFC1-208ENST00000504849 OR9G1Q8NH87 305 aa3.17□□□□□ -1.9
RFC1-208ENST00000504849 FAM222BQ8WU58 562 aa3.17□□□□□ -1.9
RFC1-208ENST00000504849 FLYWCH2Q96CP2 140 aaKnown RBP3.17□□□□□ -1.9
RFC1-208ENST00000504849 FXYD5Q96DB9 178 aa3.17□□□□□ -1.9
RFC1-208ENST00000504849 FAM167A-AS1Q96KT0 104 aa3.17□□□□□ -1.9
RFC1-208ENST00000504849 PGLYRP4Q96LB8 373 aa3.17□□□□□ -1.9
RFC1-208ENST00000504849 TRGV9Q99603 122 aa3.17□□□□□ -1.9
RFC1-208ENST00000504849 OTORQ9NRC9 128 aa3.17□□□□□ -1.9
RFC1-208ENST00000504849 SPRR3Q9UBC9 169 aa3.17□□□□□ -1.9
RFC1-208ENST00000504849 KLF12Q9Y4X4 402 aa3.17□□□□□ -1.9
RFC1-208ENST00000504849 YLPM1P49750 1951 aaKnown RBP3.17□□□□□ -1.9
RFC1-208ENST00000504849 SETD2Q9BYW2 2564 aaPredicted RBP3.16□□□□□ -1.9
RFC1-208ENST00000504849 F5P12259 2224 aa3.16□□□□□ -1.9
RFC1-208ENST00000504849 MYO7AQ13402 2215 aa3.16□□□□□ -1.9
RFC1-208ENST00000504849 ZFHX3Q15911 3703 aa3.16□□□□□ -1.9
RFC1-208ENST00000504849 IGKV1D-17A0A075B6S4 117 aa3.16□□□□□ -1.9
RFC1-208ENST00000504849 TRAV5A0A0B4J249 113 aa3.16□□□□□ -1.9
RFC1-208ENST00000504849 A0A0G2JLM5 398 aa3.16□□□□□ -1.9
RFC1-208ENST00000504849 A0A1B0GUT8 65 aa3.16□□□□□ -1.9
RFC1-208ENST00000504849 A0A1B0GUV1 79 aa3.16□□□□□ -1.9
RFC1-208ENST00000504849 PSMB11A5LHX3 300 aa3.16□□□□□ -1.9
RFC1-208ENST00000504849 C19orf71A6NCJ1 209 aa3.16□□□□□ -1.9
RFC1-208ENST00000504849 SHISA9B4DS77 424 aa3.16□□□□□ -1.9
RFC1-208ENST00000504849 TMEM238C9JI98 176 aa3.16□□□□□ -1.9
RFC1-208ENST00000504849 ZNF207O43670 478 aaKnown RBP3.16□□□□□ -1.9
RFC1-208ENST00000504849 LYZL6O75951 148 aa3.16□□□□□ -1.9
RFC1-208ENST00000504849 MOSP00540 346 aa3.16□□□□□ -1.9
RFC1-208ENST00000504849 TCRAP04437 139 aa3.16□□□□□ -1.9
RFC1-208ENST00000504849 CECR9P0C854 216 aa3.16□□□□□ -1.9
RFC1-208ENST00000504849 SAA1P0DJI8 122 aaPredicted RBP3.16□□□□□ -1.9
RFC1-208ENST00000504849 PYYP10082 97 aa3.16□□□□□ -1.9
RFC1-208ENST00000504849 S100A7P31151 101 aa3.16□□□□□ -1.9
RFC1-208ENST00000504849 MYCNOSP40205 109 aa3.16□□□□□ -1.9
RFC1-208ENST00000504849 FABP6P51161 128 aa3.16□□□□□ -1.9
RFC1-208ENST00000504849 ZNF137PP52743 207 aa3.16□□□□□ -1.9
RFC1-208ENST00000504849 FOXA3P55318 350 aaPredicted RBP3.16□□□□□ -1.9
RFC1-208ENST00000504849 GNG5P63218 68 aa3.16□□□□□ -1.9
RFC1-208ENST00000504849 PLGLAQ15195 96 aa3.16□□□□□ -1.9
RFC1-208ENST00000504849 LGALS9BQ3B8N2 356 aa3.16□□□□□ -1.9
RFC1-208ENST00000504849 ADAMTSL4-AS1Q5T5F5 129 aa3.16□□□□□ -1.9
RFC1-208ENST00000504849 LGALS9CQ6DKI2 356 aa3.16□□□□□ -1.9
RFC1-208ENST00000504849 UFSP1Q6NVU6 142 aa3.16□□□□□ -1.9
RFC1-208ENST00000504849 LINC00305Q7Z4B0 112 aa3.16□□□□□ -1.9
RFC1-208ENST00000504849 Q86TA4 180 aa3.16□□□□□ -1.9
RFC1-208ENST00000504849 ZCCHC24Q8N2G6 241 aaKnown RBP3.16□□□□□ -1.9
RFC1-208ENST00000504849 CNEP1R1Q8N9A8 125 aa3.16□□□□□ -1.9
RFC1-208ENST00000504849 MDS2Q8NDY4 140 aa3.16□□□□□ -1.9
RFC1-208ENST00000504849 OR2K2Q8NGT1 345 aa3.16□□□□□ -1.9
RFC1-208ENST00000504849 TMEM167AQ8TBQ9 72 aa3.16□□□□□ -1.9
RFC1-208ENST00000504849 DEFB127Q9H1M4 99 aa3.16□□□□□ -1.9
RFC1-208ENST00000504849 LINC00574Q9H8X3 128 aa3.16□□□□□ -1.9
RFC1-208ENST00000504849 NDUFA4L2Q9NRX3 87 aa3.16□□□□□ -1.9
RFC1-208ENST00000504849 TMEM14CQ9P0S9 112 aa3.16□□□□□ -1.9
RFC1-208ENST00000504849 RPUSD1Q9UJJ7 312 aaKnown RBP3.16□□□□□ -1.9
RFC1-208ENST00000504849 ZNF835Q9Y2P0 537 aa3.16□□□□□ -1.9
RFC1-208ENST00000504849 SPCS1Q9Y6A9 102 aa3.16□□□□□ -1.9
RFC1-208ENST00000504849 SHANK1Q9Y566 2161 aa3.16□□□□□ -1.9
RFC1-208ENST00000504849 ASXL3Q9C0F0 2248 aa3.16□□□□□ -1.9
RFC1-208ENST00000504849 AKAP13Q12802 2813 aa3.15□□□□□ -1.9
RFC1-208ENST00000504849 IGKV1OR2-108A0A075B7D4 117 aa3.15□□□□□ -1.91
RFC1-208ENST00000504849 IGHV3OR15-7A0A075B7D8 119 aa3.15□□□□□ -1.91
RFC1-208ENST00000504849 TRAV8-6A0A0B4J262 113 aa3.15□□□□□ -1.91
RFC1-208ENST00000504849 A0A1B0GV72 72 aa3.15□□□□□ -1.91
RFC1-208ENST00000504849 A0A1W2PPM0 123 aa3.15□□□□□ -1.91
RFC1-208ENST00000504849 K7ENP7 123 aa3.15□□□□□ -1.91
RFC1-208ENST00000504849 IGLV1-44P01699 117 aa3.15□□□□□ -1.91
RFC1-208ENST00000504849 IGHV3-13P01766 116 aa3.15□□□□□ -1.91
RFC1-208ENST00000504849 IGHV3-7P01780 117 aa3.15□□□□□ -1.91
RFC1-208ENST00000504849 HBDP02042 147 aa3.15□□□□□ -1.91
RFC1-208ENST00000504849 TFF1P04155 84 aa3.15□□□□□ -1.91
RFC1-208ENST00000504849 NBEAP1P0C6P0 100 aa3.15□□□□□ -1.91
RFC1-208ENST00000504849 SMIM13P0DJ93 91 aa3.15□□□□□ -1.91
RFC1-208ENST00000504849 CGB3P0DN86 165 aa3.15□□□□□ -1.91
RFC1-208ENST00000504849 CGB7P0DN87 165 aa3.15□□□□□ -1.91
RFC1-208ENST00000504849 ORM2P19652 201 aa3.15□□□□□ -1.91
RFC1-208ENST00000504849 GATA2P23769 480 aaPredicted RBP3.15□□□□□ -1.91
RFC1-208ENST00000504849 ATP5J2P56134 94 aa3.15□□□□□ -1.91
RFC1-208ENST00000504849 NDUFV3P56181 108 aaKnown RBP3.15□□□□□ -1.91
RFC1-208ENST00000504849 LMO4P61968 165 aa3.15□□□□□ -1.91
RFC1-208ENST00000504849 MEF2CQ06413 473 aaPredicted RBP3.15□□□□□ -1.91
RFC1-208ENST00000504849 TIMM23BQ5SRD1 257 aa3.15□□□□□ -1.91
RFC1-208ENST00000504849 ZNF833PQ6ZTB9 187 aa3.15□□□□□ -1.91
RFC1-208ENST00000504849 BOD1L2Q8IYS8 172 aa3.15□□□□□ -1.91
RFC1-208ENST00000504849 LYPD1Q8N2G4 141 aa3.15□□□□□ -1.91
RFC1-208ENST00000504849 ZADH2Q8N4Q0 377 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms