RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 TRAV26-1A0A087WT03 109 aa10□□□□□ -0.81
HOXC9-202ENST00000504557 ARPC5O15511 151 aa10□□□□□ -0.81
HOXC9-202ENST00000504557 C11orf72Q8NBR9 251 aa10□□□□□ -0.81
HOXC9-202ENST00000504557 OR2G3Q8NGZ4 309 aa10□□□□□ -0.81
HOXC9-202ENST00000504557 ASB13Q8WXK3 278 aa10□□□□□ -0.81
HOXC9-202ENST00000504557 PSMG3Q9BT73 122 aaPredicted RBP10□□□□□ -0.81
HOXC9-202ENST00000504557 BIRC6Q9NR09 4857 aa10□□□□□ -0.81
HOXC9-202ENST00000504557 MUC4Q99102 2169 aa9.99□□□□□ -0.81
HOXC9-202ENST00000504557 TRAV8-1A0A0A6YYK1 113 aa9.99□□□□□ -0.81
HOXC9-202ENST00000504557 RBAKDNA6NC62 111 aa9.99□□□□□ -0.81
HOXC9-202ENST00000504557 F6UZH7 168 aa9.99□□□□□ -0.81
HOXC9-202ENST00000504557 IGHV3-53P01767 116 aa9.99□□□□□ -0.81
HOXC9-202ENST00000504557 HOXA5P20719 270 aa9.99□□□□□ -0.81
HOXC9-202ENST00000504557 GCHFRP30047 84 aa9.99□□□□□ -0.81
HOXC9-202ENST00000504557 GNPNAT1Q96EK6 184 aaPredicted RBP9.99□□□□□ -0.81
HOXC9-202ENST00000504557 MRPL16Q9NX20 251 aaKnown RBP9.99□□□□□ -0.81
HOXC9-202ENST00000504557 MBP02144 154 aa9.98□□□□□ -0.81
HOXC9-202ENST00000504557 NMBP08949 121 aa9.98□□□□□ -0.81
HOXC9-202ENST00000504557 STAG3L2P0CL84 134 aa9.98□□□□□ -0.81
HOXC9-202ENST00000504557 STAG3L3P0CL85 134 aa9.98□□□□□ -0.81
HOXC9-202ENST00000504557 DAZ2Q13117 558 aaKnown RBP9.98□□□□□ -0.81
HOXC9-202ENST00000504557 ANXA2RQ3ZCQ2 193 aa9.98□□□□□ -0.81
HOXC9-202ENST00000504557 SSX7Q7RTT5 188 aa9.98□□□□□ -0.81
HOXC9-202ENST00000504557 ACTR3CQ9C0K3 210 aaPredicted RBP9.98□□□□□ -0.81
HOXC9-202ENST00000504557 TCL1AP56279 114 aa9.97□□□□□ -0.81
HOXC9-202ENST00000504557 SERF2P84101 59 aa9.97□□□□□ -0.81
HOXC9-202ENST00000504557 TMEM183BQ1AE95 376 aa9.97□□□□□ -0.81
HOXC9-202ENST00000504557 RNF212Q495C1 297 aa9.97□□□□□ -0.81
HOXC9-202ENST00000504557 TMEM183AQ8IXX5 376 aa9.97□□□□□ -0.81
HOXC9-202ENST00000504557 LINC00612Q8N6U2 182 aa9.97□□□□□ -0.81
HOXC9-202ENST00000504557 DNAH10Q8IVF4 4471 aa9.96□□□□□ -0.81
HOXC9-202ENST00000504557 G3V3Q6 166 aa9.96□□□□□ -0.82
HOXC9-202ENST00000504557 CXorf1O96002 111 aa9.96□□□□□ -0.82
HOXC9-202ENST00000504557 ZNF415Q09FC8 603 aa9.96□□□□□ -0.82
HOXC9-202ENST00000504557 FAM159AQ6UWV7 190 aa9.96□□□□□ -0.82
HOXC9-202ENST00000504557 LINC00467Q9BRT7 94 aa9.96□□□□□ -0.82
HOXC9-202ENST00000504557 TREM1Q9NP99 234 aa9.96□□□□□ -0.82
HOXC9-202ENST00000504557 TRBV7-9A0A0J9YWB2 115 aa9.95□□□□□ -0.82
HOXC9-202ENST00000504557 FGF8P55075 233 aaPredicted RBP9.95□□□□□ -0.82
HOXC9-202ENST00000504557 CCL18P55774 89 aa9.95□□□□□ -0.82
HOXC9-202ENST00000504557 UBE2G2P60604 165 aa9.95□□□□□ -0.82
HOXC9-202ENST00000504557 SUMO1P63165 101 aaKnown RBP9.95□□□□□ -0.82
HOXC9-202ENST00000504557 AKR1C8PQ5T2L2 129 aa9.95□□□□□ -0.82
HOXC9-202ENST00000504557 ST6GAL2Q96JF0 529 aa9.95□□□□□ -0.82
HOXC9-202ENST00000504557 MDFICQ9P1T7 246 aa9.95□□□□□ -0.82
HOXC9-202ENST00000504557 SPINK4O60575 86 aa9.94□□□□□ -0.82
HOXC9-202ENST00000504557 ZNF726P1Q15940 193 aa9.94□□□□□ -0.82
HOXC9-202ENST00000504557 IBA57Q5T440 356 aaKnown RBP9.94□□□□□ -0.82
HOXC9-202ENST00000504557 Q6AWC8 147 aa9.94□□□□□ -0.82
HOXC9-202ENST00000504557 C5orf17Q8NAS9 161 aa9.94□□□□□ -0.82
HOXC9-202ENST00000504557 TVP23CQ96ET8 276 aa9.94□□□□□ -0.82
HOXC9-202ENST00000504557 C8orf49Q96NF6 230 aa9.94□□□□□ -0.82
HOXC9-202ENST00000504557 TMEM167BQ9NRX6 74 aa9.94□□□□□ -0.82
HOXC9-202ENST00000504557 LINC00588Q9Y4M8 146 aa9.94□□□□□ -0.82
HOXC9-202ENST00000504557 LENEPQ9Y5L5 61 aa9.94□□□□□ -0.82
HOXC9-202ENST00000504557 CTXND1A0A1B0GTU2 59 aa9.93□□□□□ -0.82
HOXC9-202ENST00000504557 GGTLC3B5MD39 225 aa9.93□□□□□ -0.82
HOXC9-202ENST00000504557 K7EQM0 130 aa9.93□□□□□ -0.82
HOXC9-202ENST00000504557 GNRH2O43555 120 aa9.93□□□□□ -0.82
HOXC9-202ENST00000504557 TCRAP04437 139 aa9.93□□□□□ -0.82
HOXC9-202ENST00000504557 LGALS9BQ3B8N2 356 aa9.93□□□□□ -0.82
HOXC9-202ENST00000504557 PRNTQ86SH4 94 aa9.93□□□□□ -0.82
HOXC9-202ENST00000504557 TMED6Q8WW62 240 aa9.93□□□□□ -0.82
HOXC9-202ENST00000504557 NDFIP1Q9BT67 221 aa9.93□□□□□ -0.82
HOXC9-202ENST00000504557 TRGV11A0A075B6L2 103 aa9.92□□□□□ -0.82
HOXC9-202ENST00000504557 TRAV21A0A0B4J279 112 aa9.92□□□□□ -0.82
HOXC9-202ENST00000504557 TAAR5O14804 337 aa9.92□□□□□ -0.82
HOXC9-202ENST00000504557 IFNA7P01567 189 aa9.92□□□□□ -0.82
HOXC9-202ENST00000504557 PSG8Q9UQ74 426 aa9.92□□□□□ -0.82
HOXC9-202ENST00000504557 TRAV34A0A0B4J273 112 aa9.91□□□□□ -0.82
HOXC9-202ENST00000504557 PRSS29PA6NIE9 313 aa9.91□□□□□ -0.82
HOXC9-202ENST00000504557 RTL8CO15255 209 aa9.91□□□□□ -0.82
HOXC9-202ENST00000504557 SFTA3P0C7M3 94 aa9.91□□□□□ -0.82
HOXC9-202ENST00000504557 VSIG2Q96IQ7 327 aa9.91□□□□□ -0.82
HOXC9-202ENST00000504557 CYTL1Q9NRR1 136 aa9.91□□□□□ -0.82
HOXC9-202ENST00000504557 EPDR1Q9UM22 224 aa9.91□□□□□ -0.82
HOXC9-202ENST00000504557 A0A096LPF7 62 aa9.9□□□□□ -0.82
HOXC9-202ENST00000504557 TRGV4A0A0C4DH28 118 aa9.9□□□□□ -0.82
HOXC9-202ENST00000504557 A0A1B0GV50 99 aa9.9□□□□□ -0.82
HOXC9-202ENST00000504557 MAP1LC3B2A6NCE7 125 aa9.9□□□□□ -0.82
HOXC9-202ENST00000504557 PAX4O43316 350 aa9.9□□□□□ -0.82
HOXC9-202ENST00000504557 FLI1Q01543 452 aaPredicted RBP9.9□□□□□ -0.82
HOXC9-202ENST00000504557 C1orf134Q5TEV5 83 aa9.9□□□□□ -0.82
HOXC9-202ENST00000504557 Q6ZR54 194 aa9.9□□□□□ -0.82
HOXC9-202ENST00000504557 LINC00336Q6ZUF6 198 aa9.9□□□□□ -0.82
HOXC9-202ENST00000504557 CYB561D1Q8N8Q1 229 aa9.9□□□□□ -0.82
HOXC9-202ENST00000504557 OR11H4Q8NGC9 324 aa9.9□□□□□ -0.82
HOXC9-202ENST00000504557 ZNRF2Q8NHG8 242 aa9.9□□□□□ -0.82
HOXC9-202ENST00000504557 SUN5Q8TC36 379 aa9.9□□□□□ -0.82
HOXC9-202ENST00000504557 LINC00479Q96M42 142 aa9.9□□□□□ -0.82
HOXC9-202ENST00000504557 MAP1LC3BQ9GZQ8 125 aa9.9□□□□□ -0.82
HOXC9-202ENST00000504557 SDF2L1Q9HCN8 221 aa9.9□□□□□ -0.82
HOXC9-202ENST00000504557 SERTM2A0A1B0GWG4 89 aa9.89□□□□□ -0.83
HOXC9-202ENST00000504557 GCGP01275 180 aa9.89□□□□□ -0.83
HOXC9-202ENST00000504557 TYMSP04818 313 aa9.89□□□□□ -0.83
HOXC9-202ENST00000504557 FHITP49789 147 aa9.89□□□□□ -0.83
HOXC9-202ENST00000504557 ZNF80P51504 273 aaPredicted RBP9.89□□□□□ -0.83
HOXC9-202ENST00000504557 FAM3BP58499 235 aaPredicted RBP9.89□□□□□ -0.83
HOXC9-202ENST00000504557 ESRGQ1W209 222 aa9.89□□□□□ -0.83
HOXC9-202ENST00000504557 ZFP69Q49AA0 526 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms