RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 PRTN3P24158 256 aa5.95□□□□□ -1.46
NEDD9-208ENST00000504387 ARL3P36405 182 aa5.95□□□□□ -1.46
NEDD9-208ENST00000504387 ADIPOQQ15848 244 aa5.95□□□□□ -1.46
NEDD9-208ENST00000504387 MRGPRG-AS1Q2M3A8 158 aa5.95□□□□□ -1.46
NEDD9-208ENST00000504387 C3orf56Q8N813 242 aa5.95□□□□□ -1.46
NEDD9-208ENST00000504387 PHLDA1Q8WV24 401 aaPredicted RBP5.95□□□□□ -1.46
NEDD9-208ENST00000504387 PTPRQQ9UMZ3 2332 aa5.95□□□□□ -1.46
NEDD9-208ENST00000504387 DOPEY2Q9Y3R5 2298 aa5.95□□□□□ -1.46
NEDD9-208ENST00000504387 DEFB1P60022 68 aa5.95□□□□□ -1.46
NEDD9-208ENST00000504387 PLA2G2CQ5R387 149 aa5.95□□□□□ -1.46
NEDD9-208ENST00000504387 ZNF491Q8N8L2 437 aa5.95□□□□□ -1.46
NEDD9-208ENST00000504387 MYOZ3Q8TDC0 251 aa5.95□□□□□ -1.46
NEDD9-208ENST00000504387 ZFHX3Q15911 3703 aa5.95□□□□□ -1.46
NEDD9-208ENST00000504387 TRBV20-1A0A075B6N2 111 aa5.95□□□□□ -1.46
NEDD9-208ENST00000504387 SCGB1C2P0DMR2 95 aa5.95□□□□□ -1.46
NEDD9-208ENST00000504387 NFE4Q86UQ8 179 aa5.95□□□□□ -1.46
NEDD9-208ENST00000504387 DTX2Q86UW9 622 aa5.95□□□□□ -1.46
NEDD9-208ENST00000504387 A0A0G2JNJ9 132 aa5.94□□□□□ -1.46
NEDD9-208ENST00000504387 B5MCH6 92 aa5.94□□□□□ -1.46
NEDD9-208ENST00000504387 E9PLD3 99 aa5.94□□□□□ -1.46
NEDD9-208ENST00000504387 ATP5IP56385 69 aaPredicted RBP5.94□□□□□ -1.46
NEDD9-208ENST00000504387 PRR25Q96S07 402 aa5.94□□□□□ -1.46
NEDD9-208ENST00000504387 Q9UFV3 132 aa5.94□□□□□ -1.46
NEDD9-208ENST00000504387 PRSS29PA6NIE9 313 aa5.94□□□□□ -1.46
NEDD9-208ENST00000504387 F8W1H4 67 aa5.94□□□□□ -1.46
NEDD9-208ENST00000504387 M0R381 172 aa5.94□□□□□ -1.46
NEDD9-208ENST00000504387 TM4SF5O14894 197 aa5.94□□□□□ -1.46
NEDD9-208ENST00000504387 XGP55808 180 aa5.94□□□□□ -1.46
NEDD9-208ENST00000504387 FHL3Q13643 280 aa5.94□□□□□ -1.46
NEDD9-208ENST00000504387 IL17RELQ6ZVW7 336 aa5.94□□□□□ -1.46
NEDD9-208ENST00000504387 SHANK2-AS3Q9BTD1 123 aa5.94□□□□□ -1.46
NEDD9-208ENST00000504387 C2CD3Q4AC94 2353 aa5.94□□□□□ -1.46
NEDD9-208ENST00000504387 ZNF292O60281 2723 aa5.94□□□□□ -1.46
NEDD9-208ENST00000504387 NACAE9PAV3 2078 aa5.93□□□□□ -1.46
NEDD9-208ENST00000504387 MBD3L4A6NDZ8 208 aaPredicted RBP5.93□□□□□ -1.46
NEDD9-208ENST00000504387 MBD3L3A6NE82 208 aaPredicted RBP5.93□□□□□ -1.46
NEDD9-208ENST00000504387 MBD3L5A6NJ08 208 aaPredicted RBP5.93□□□□□ -1.46
NEDD9-208ENST00000504387 TEX22C9J3V5 150 aa5.93□□□□□ -1.46
NEDD9-208ENST00000504387 HOXA3O43365 443 aaPredicted RBP5.93□□□□□ -1.46
NEDD9-208ENST00000504387 CRYGCP07315 174 aa5.93□□□□□ -1.46
NEDD9-208ENST00000504387 IGHV1-8P0DP01 117 aa5.93□□□□□ -1.46
NEDD9-208ENST00000504387 FOXC1Q12948 553 aa5.93□□□□□ -1.46
NEDD9-208ENST00000504387 KLRD1Q13241 179 aa5.93□□□□□ -1.46
NEDD9-208ENST00000504387 MBD3L2Q8NHZ7 208 aaPredicted RBP5.93□□□□□ -1.46
NEDD9-208ENST00000504387 RNF185Q96GF1 192 aa5.93□□□□□ -1.46
NEDD9-208ENST00000504387 RAX2Q96IS3 184 aa5.93□□□□□ -1.46
NEDD9-208ENST00000504387 BEX4Q9NWD9 120 aaPredicted RBP5.93□□□□□ -1.46
NEDD9-208ENST00000504387 IGHV3-64A0A075B6Q5 118 aa5.93□□□□□ -1.46
NEDD9-208ENST00000504387 IGHV1-3A0A0C4DH29 117 aa5.93□□□□□ -1.46
NEDD9-208ENST00000504387 TIMM23O14925 209 aa5.93□□□□□ -1.46
NEDD9-208ENST00000504387 SIVA1O15304 175 aa5.93□□□□□ -1.46
NEDD9-208ENST00000504387 LOXP28300 417 aaPredicted RBP5.93□□□□□ -1.46
NEDD9-208ENST00000504387 MC5RP33032 325 aa5.93□□□□□ -1.46
NEDD9-208ENST00000504387 SPANXN1Q5VSR9 72 aa5.93□□□□□ -1.46
NEDD9-208ENST00000504387 C8orf86Q6ZUL3 223 aa5.93□□□□□ -1.46
NEDD9-208ENST00000504387 IGLV3-9A0A075B6K5 115 aa5.93□□□□□ -1.46
NEDD9-208ENST00000504387 OR11H12B2RN74 326 aa5.93□□□□□ -1.46
NEDD9-208ENST00000504387 TMEM178BH3BS89 294 aa5.93□□□□□ -1.46
NEDD9-208ENST00000504387 I3L2K1 104 aa5.93□□□□□ -1.46
NEDD9-208ENST00000504387 K7EIM0 57 aa5.93□□□□□ -1.46
NEDD9-208ENST00000504387 MGPP08493 103 aa5.93□□□□□ -1.46
NEDD9-208ENST00000504387 DYNAPQ8N1N2 210 aa5.93□□□□□ -1.46
NEDD9-208ENST00000504387 OR11H1Q8NG94 326 aa5.93□□□□□ -1.46
NEDD9-208ENST00000504387 OR11H2Q8NH07 326 aa5.93□□□□□ -1.46
NEDD9-208ENST00000504387 CFHR4Q92496 578 aa5.93□□□□□ -1.46
NEDD9-208ENST00000504387 PLEKHB2Q96CS7 222 aa5.93□□□□□ -1.46
NEDD9-208ENST00000504387 FOXI1Q12951 378 aa5.92□□□□□ -1.46
NEDD9-208ENST00000504387 RRN3P1Q2M238 152 aa5.92□□□□□ -1.46
NEDD9-208ENST00000504387 MRAP2Q96G30 205 aa5.92□□□□□ -1.46
NEDD9-208ENST00000504387 ZNF815PA8K554 130 aa5.92□□□□□ -1.46
NEDD9-208ENST00000504387 RPL7P18124 248 aaKnown RBP5.92□□□□□ -1.46
NEDD9-208ENST00000504387 ANAPC13Q9BS18 74 aa5.92□□□□□ -1.46
NEDD9-208ENST00000504387 H3BRN7 92 aa5.91□□□□□ -1.46
NEDD9-208ENST00000504387 SLC25A16P16260 332 aa5.91□□□□□ -1.46
NEDD9-208ENST00000504387 SMCPP49901 116 aaPredicted RBP5.91□□□□□ -1.46
NEDD9-208ENST00000504387 NDPQ00604 133 aa5.91□□□□□ -1.46
NEDD9-208ENST00000504387 ZNF493Q6ZR52 646 aa5.91□□□□□ -1.46
NEDD9-208ENST00000504387 RNASE6Q93091 150 aaKnown RBP5.91□□□□□ -1.46
NEDD9-208ENST00000504387 RAXQ9Y2V3 346 aa5.91□□□□□ -1.46
NEDD9-208ENST00000504387 CSPG4Q6UVK1 2322 aa5.91□□□□□ -1.46
NEDD9-208ENST00000504387 IGF1P05019 195 aa5.91□□□□□ -1.46
NEDD9-208ENST00000504387 GRNP28799 593 aaKnown RBP5.91□□□□□ -1.46
NEDD9-208ENST00000504387 PAX8Q06710 450 aa5.91□□□□□ -1.46
NEDD9-208ENST00000504387 RPL39LQ96EH5 51 aaKnown RBP5.91□□□□□ -1.46
NEDD9-208ENST00000504387 SCGB3A1Q96QR1 104 aa5.91□□□□□ -1.46
NEDD9-208ENST00000504387 Q6AWC8 147 aa5.91□□□□□ -1.46
NEDD9-208ENST00000504387 FAM57AQ8TBR7 257 aa5.91□□□□□ -1.46
NEDD9-208ENST00000504387 DPF1Q92782 380 aa5.91□□□□□ -1.46
NEDD9-208ENST00000504387 CDIP1Q9H305 208 aa5.91□□□□□ -1.46
NEDD9-208ENST00000504387 C11orf21Q9P2W6 132 aa5.91□□□□□ -1.46
NEDD9-208ENST00000504387 CD3EP07766 207 aa5.9□□□□□ -1.46
NEDD9-208ENST00000504387 MORN3Q6PF18 240 aaPredicted RBP5.9□□□□□ -1.46
NEDD9-208ENST00000504387 PRADC1Q9BSG0 188 aa5.9□□□□□ -1.46
NEDD9-208ENST00000504387 TM2D2Q9BX73 214 aa5.9□□□□□ -1.46
NEDD9-208ENST00000504387 LINC00527Q9UJ94 153 aa5.9□□□□□ -1.46
NEDD9-208ENST00000504387 IGHV3OR16-10A0A075B7F0 116 aa5.9□□□□□ -1.47
NEDD9-208ENST00000504387 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.9□□□□□ -1.47
NEDD9-208ENST00000504387 A0A1B0GW15 77 aa5.9□□□□□ -1.47
NEDD9-208ENST00000504387 FABP5P3A8MUU1 101 aa5.9□□□□□ -1.47
NEDD9-208ENST00000504387 E7EQL1 145 aa5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms