RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 IGHV4-4A0A075B6R2 117 aa7.45□□□□□ -1.22
COL1A1-210ENST00000504289 ORM1P02763 201 aa7.45□□□□□ -1.22
COL1A1-210ENST00000504289 LINC00614P0C842 121 aa7.45□□□□□ -1.22
COL1A1-210ENST00000504289 MED14OSP0DP75 135 aa7.45□□□□□ -1.22
COL1A1-210ENST00000504289 ZNF80P51504 273 aaPredicted RBP7.45□□□□□ -1.22
COL1A1-210ENST00000504289 CACNG7P62955 275 aa7.45□□□□□ -1.22
COL1A1-210ENST00000504289 ERCC8Q13216 396 aa7.45□□□□□ -1.22
COL1A1-210ENST00000504289 SCGB2A2Q13296 93 aa7.45□□□□□ -1.22
COL1A1-210ENST00000504289 IGFL4Q6B9Z1 124 aa7.45□□□□□ -1.22
COL1A1-210ENST00000504289 TEX43Q6ZNM6 134 aa7.45□□□□□ -1.22
COL1A1-210ENST00000504289 Q8TAT8 98 aa7.45□□□□□ -1.22
COL1A1-210ENST00000504289 ODF3Q96PU9 254 aa7.45□□□□□ -1.22
COL1A1-210ENST00000504289 APCP25054 2843 aa7.45□□□□□ -1.22
COL1A1-210ENST00000504289 IGHV3OR16-13A0A075B7E8 117 aa7.44□□□□□ -1.22
COL1A1-210ENST00000504289 IGHV3-74A0A0B4J1X5 117 aa7.44□□□□□ -1.22
COL1A1-210ENST00000504289 HOXA3O43365 443 aaPredicted RBP7.44□□□□□ -1.22
COL1A1-210ENST00000504289 ZNF124Q15973 351 aa7.44□□□□□ -1.22
COL1A1-210ENST00000504289 PMCHL1Q16048 86 aa7.44□□□□□ -1.22
COL1A1-210ENST00000504289 FAM19A4Q96LR4 140 aa7.44□□□□□ -1.22
COL1A1-210ENST00000504289 FOXC2Q99958 501 aa7.44□□□□□ -1.22
COL1A1-210ENST00000504289 IGHV3-49A0A0A0MS15 119 aa7.43□□□□□ -1.22
COL1A1-210ENST00000504289 TRAV2A0A0B4J234 112 aa7.43□□□□□ -1.22
COL1A1-210ENST00000504289 TRAV21A0A0B4J279 112 aa7.43□□□□□ -1.22
COL1A1-210ENST00000504289 KIR2DL5BA0A0G2JN68 375 aa7.43□□□□□ -1.22
COL1A1-210ENST00000504289 KIR2DL5BA0A0G2JPC4 375 aa7.43□□□□□ -1.22
COL1A1-210ENST00000504289 C20orf202A1L168 122 aa7.43□□□□□ -1.22
COL1A1-210ENST00000504289 M0R2Z0 102 aa7.43□□□□□ -1.22
COL1A1-210ENST00000504289 SNAI2O43623 268 aa7.43□□□□□ -1.22
COL1A1-210ENST00000504289 DDTP30046 118 aa7.43□□□□□ -1.22
COL1A1-210ENST00000504289 TM4SF20Q53R12 229 aa7.43□□□□□ -1.22
COL1A1-210ENST00000504289 CDPF1Q6NVV7 123 aa7.43□□□□□ -1.22
COL1A1-210ENST00000504289 Q71RC1 249 aaPredicted RBP7.43□□□□□ -1.22
COL1A1-210ENST00000504289 ZNF575Q86XF7 245 aa7.43□□□□□ -1.22
COL1A1-210ENST00000504289 KIR2DL5AQ8N109 375 aa7.43□□□□□ -1.22
COL1A1-210ENST00000504289 ORMDL3Q8N138 153 aa7.43□□□□□ -1.22
COL1A1-210ENST00000504289 ZNF664Q8N3J9 261 aa7.43□□□□□ -1.22
COL1A1-210ENST00000504289 MAPK1IP1LQ8NDC0 245 aa7.43□□□□□ -1.22
COL1A1-210ENST00000504289 OR8A1Q8NGG7 326 aa7.43□□□□□ -1.22
COL1A1-210ENST00000504289 C20orf144Q9BQM9 153 aa7.43□□□□□ -1.22
COL1A1-210ENST00000504289 FAM181BA6NEQ2 426 aa7.42□□□□□ -1.22
COL1A1-210ENST00000504289 M0QZ24 198 aa7.42□□□□□ -1.22
COL1A1-210ENST00000504289 CRXO43186 299 aaPredicted RBP7.42□□□□□ -1.22
COL1A1-210ENST00000504289 RPLP1P05386 114 aaKnown RBP7.42□□□□□ -1.22
COL1A1-210ENST00000504289 ZNF705DP0CH99 300 aaPredicted RBP7.42□□□□□ -1.22
COL1A1-210ENST00000504289 ZNF705BP0CI00 300 aaPredicted RBP7.42□□□□□ -1.22
COL1A1-210ENST00000504289 NTF3P20783 257 aa7.42□□□□□ -1.22
COL1A1-210ENST00000504289 DEFA6Q01524 100 aa7.42□□□□□ -1.22
COL1A1-210ENST00000504289 TWIST1Q15672 202 aa7.42□□□□□ -1.22
COL1A1-210ENST00000504289 RNASEKQ6P5S7 137 aaKnown RBP7.42□□□□□ -1.22
COL1A1-210ENST00000504289 SMIM15Q7Z3B0 74 aa7.42□□□□□ -1.22
COL1A1-210ENST00000504289 MRPL52Q86TS9 123 aaKnown RBP7.42□□□□□ -1.22
COL1A1-210ENST00000504289 DEFB125Q8N687 156 aa7.42□□□□□ -1.22
COL1A1-210ENST00000504289 C20orf173Q96LM9 149 aa7.42□□□□□ -1.22
COL1A1-210ENST00000504289 TPPP3Q9BW30 176 aa7.42□□□□□ -1.22
COL1A1-210ENST00000504289 ZANQ9Y493 2812 aa7.41□□□□□ -1.22
COL1A1-210ENST00000504289 TMSB15BA0A087X1C1 80 aa7.41□□□□□ -1.22
COL1A1-210ENST00000504289 IGKV3D-20A0A0C4DH25 116 aa7.41□□□□□ -1.22
COL1A1-210ENST00000504289 TMEM213A2RRL7 107 aa7.41□□□□□ -1.22
COL1A1-210ENST00000504289 C3orf79P0CE67 100 aa7.41□□□□□ -1.22
COL1A1-210ENST00000504289 KRTDAPP60985 99 aa7.41□□□□□ -1.22
COL1A1-210ENST00000504289 SNRPD3P62318 126 aaKnown RBP7.41□□□□□ -1.22
COL1A1-210ENST00000504289 RPL11P62913 178 aaKnown RBP7.41□□□□□ -1.22
COL1A1-210ENST00000504289 TMEM95Q3KNT9 176 aa7.41□□□□□ -1.22
COL1A1-210ENST00000504289 ZFAND2AQ8N6M9 145 aa7.41□□□□□ -1.22
COL1A1-210ENST00000504289 DCANP1Q8TF63 244 aa7.41□□□□□ -1.22
COL1A1-210ENST00000504289 URB1-AS1Q96HZ7 61 aa7.41□□□□□ -1.22
COL1A1-210ENST00000504289 PRELID3AQ96N28 172 aa7.41□□□□□ -1.22
COL1A1-210ENST00000504289 NDUFAF3Q9BU61 184 aa7.41□□□□□ -1.22
COL1A1-210ENST00000504289 VAMP8Q9BV40 100 aa7.41□□□□□ -1.22
COL1A1-210ENST00000504289 AP5S1Q9NUS5 200 aa7.41□□□□□ -1.22
COL1A1-210ENST00000504289 HSPB8Q9UJY1 196 aa7.41□□□□□ -1.22
COL1A1-210ENST00000504289 LINC01546A6NGU7 62 aa7.4□□□□□ -1.22
COL1A1-210ENST00000504289 C2orf70A6NJV1 201 aa7.4□□□□□ -1.22
COL1A1-210ENST00000504289 CD5LO43866 347 aa7.4□□□□□ -1.22
COL1A1-210ENST00000504289 CKS2P33552 79 aa7.4□□□□□ -1.22
COL1A1-210ENST00000504289 LEPP41159 167 aa7.4□□□□□ -1.22
COL1A1-210ENST00000504289 LCNL1Q6ZST4 164 aa7.4□□□□□ -1.22
COL1A1-210ENST00000504289 FA2HQ7L5A8 372 aa7.4□□□□□ -1.22
COL1A1-210ENST00000504289 SPATA12Q7Z6I5 190 aa7.4□□□□□ -1.22
COL1A1-210ENST00000504289 Q8N976 141 aa7.4□□□□□ -1.22
COL1A1-210ENST00000504289 PRSS3P2Q8NHM4 247 aa7.4□□□□□ -1.22
COL1A1-210ENST00000504289 C4orf3Q8WVX3 66 aa7.4□□□□□ -1.22
COL1A1-210ENST00000504289 TMEM70Q9BUB7 260 aa7.4□□□□□ -1.22
COL1A1-210ENST00000504289 TMEM160Q9NX00 188 aa7.4□□□□□ -1.22
COL1A1-210ENST00000504289 MXRA5Q9NR99 2828 aa7.39□□□□□ -1.23
COL1A1-210ENST00000504289 IGHV1-24A0A0C4DH33 117 aa7.39□□□□□ -1.23
COL1A1-210ENST00000504289 PRSS47A8MTI9 375 aa7.39□□□□□ -1.23
COL1A1-210ENST00000504289 KLLNB2CW77 178 aa7.39□□□□□ -1.23
COL1A1-210ENST00000504289 D6R8Y8 96 aa7.39□□□□□ -1.23
COL1A1-210ENST00000504289 K7EQG2 157 aa7.39□□□□□ -1.23
COL1A1-210ENST00000504289 TCF21O43680 179 aa7.39□□□□□ -1.23
COL1A1-210ENST00000504289 DUSP14O95147 198 aaKnown RBP7.39□□□□□ -1.23
COL1A1-210ENST00000504289 LEPROTL1O95214 131 aa7.39□□□□□ -1.23
COL1A1-210ENST00000504289 TSPOP30536 169 aa7.39□□□□□ -1.23
COL1A1-210ENST00000504289 HOXD3P31249 432 aaPredicted RBP7.39□□□□□ -1.23
COL1A1-210ENST00000504289 MRPL51Q4U2R6 128 aaKnown RBP7.39□□□□□ -1.23
COL1A1-210ENST00000504289 HIST2H2BCQ6DN03 193 aa7.39□□□□□ -1.23
COL1A1-210ENST00000504289 PET117Q6UWS5 81 aa7.39□□□□□ -1.23
COL1A1-210ENST00000504289 FAM19A2Q8N3H0 131 aa7.39□□□□□ -1.23
COL1A1-210ENST00000504289 KLHDC1Q8N7A1 406 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms