RNA–Protein interactions for RNA: ENST00000504227.5

CYSTM1-202, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 5

Gene CYSTM1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-202ENST00000504227 UBE2CO00762 179 aa10.15□□□□□ -0.78
CYSTM1-202ENST00000504227 CA1P00915 261 aaPredicted RBP10.15□□□□□ -0.78
CYSTM1-202ENST00000504227 FRMD6-AS1P0C7T7 363 aa10.15□□□□□ -0.78
CYSTM1-202ENST00000504227 SLC7A5P1Q8MH63 180 aa10.15□□□□□ -0.78
CYSTM1-202ENST00000504227 NHLRC2Q8NBF2 726 aa10.15□□□□□ -0.78
CYSTM1-202ENST00000504227 SMIM12Q96EX1 92 aa10.15□□□□□ -0.78
CYSTM1-202ENST00000504227 XCL2Q9UBD3 114 aa10.15□□□□□ -0.78
CYSTM1-202ENST00000504227 TRBV20OR9-2A0A075B6H5 130 aa10.14□□□□□ -0.79
CYSTM1-202ENST00000504227 TRAV12-2A0A075B6T6 113 aa10.14□□□□□ -0.79
CYSTM1-202ENST00000504227 C7orf71A4D174 169 aa10.14□□□□□ -0.79
CYSTM1-202ENST00000504227 INSP01308 110 aa10.14□□□□□ -0.79
CYSTM1-202ENST00000504227 MGST1P10620 155 aaKnown RBP10.14□□□□□ -0.79
CYSTM1-202ENST00000504227 COX8CQ7Z4L0 72 aa10.14□□□□□ -0.79
CYSTM1-202ENST00000504227 OCC1Q8TAD7 63 aa10.14□□□□□ -0.79
CYSTM1-202ENST00000504227 NIPSNAP3BQ9BS92 247 aa10.14□□□□□ -0.79
CYSTM1-202ENST00000504227 MLST8Q9BVC4 326 aa10.14□□□□□ -0.79
CYSTM1-202ENST00000504227 BIN3Q9NQY0 253 aa10.14□□□□□ -0.79
CYSTM1-202ENST00000504227 NAT8Q9UHE5 227 aa10.14□□□□□ -0.79
CYSTM1-202ENST00000504227 LY96Q9Y6Y9 160 aa10.14□□□□□ -0.79
CYSTM1-202ENST00000504227 F8W036 122 aa10.13□□□□□ -0.79
CYSTM1-202ENST00000504227 GCGP01275 180 aa10.13□□□□□ -0.79
CYSTM1-202ENST00000504227 GIG44P09565 113 aaPredicted RBP10.13□□□□□ -0.79
CYSTM1-202ENST00000504227 KIR3DS1Q14943 382 aa10.13□□□□□ -0.79
CYSTM1-202ENST00000504227 GFI1BQ5VTD9 330 aa10.13□□□□□ -0.79
CYSTM1-202ENST00000504227 MRAPQ8TCY5 172 aa10.13□□□□□ -0.79
CYSTM1-202ENST00000504227 ZC2HC1AQ96GY0 325 aa10.13□□□□□ -0.79
CYSTM1-202ENST00000504227 TRAV12-3A0A0B4J271 114 aa10.12□□□□□ -0.79
CYSTM1-202ENST00000504227 TRAV21A0A0B4J279 112 aa10.12□□□□□ -0.79
CYSTM1-202ENST00000504227 PGPEP1LA6NFU8 196 aa10.12□□□□□ -0.79
CYSTM1-202ENST00000504227 FABP5P3A8MUU1 101 aa10.12□□□□□ -0.79
CYSTM1-202ENST00000504227 CRXO43186 299 aaPredicted RBP10.12□□□□□ -0.79
CYSTM1-202ENST00000504227 IGLV2-8P01709 118 aa10.12□□□□□ -0.79
CYSTM1-202ENST00000504227 BTN1A1Q13410 526 aa10.12□□□□□ -0.79
CYSTM1-202ENST00000504227 FAM162BQ5T6X4 162 aa10.12□□□□□ -0.79
CYSTM1-202ENST00000504227 PRR9Q5T870 116 aa10.12□□□□□ -0.79
CYSTM1-202ENST00000504227 Q6AWC8 147 aa10.12□□□□□ -0.79
CYSTM1-202ENST00000504227 C20orf144Q9BQM9 153 aa10.12□□□□□ -0.79
CYSTM1-202ENST00000504227 SEC11CQ9BY50 192 aa10.12□□□□□ -0.79
CYSTM1-202ENST00000504227 GOLT1BQ9Y3E0 138 aa10.12□□□□□ -0.79
CYSTM1-202ENST00000504227 ZNF80P51504 273 aaPredicted RBP10.11□□□□□ -0.79
CYSTM1-202ENST00000504227 PRR27Q6MZM9 219 aa10.11□□□□□ -0.79
CYSTM1-202ENST00000504227 DAZAP1Q96EP5 407 aaKnown RBP10.11□□□□□ -0.79
CYSTM1-202ENST00000504227 TMEM208Q9BTX3 173 aa10.11□□□□□ -0.79
CYSTM1-202ENST00000504227 SDF2L1Q9HCN8 221 aa10.11□□□□□ -0.79
CYSTM1-202ENST00000504227 ZNF324O75467 553 aaPredicted RBP10.1□□□□□ -0.79
CYSTM1-202ENST00000504227 PFN1P07737 140 aaKnown RBP10.1□□□□□ -0.79
CYSTM1-202ENST00000504227 DEFA6Q01524 100 aa10.1□□□□□ -0.79
CYSTM1-202ENST00000504227 ADIRFQ15847 76 aa10.1□□□□□ -0.79
CYSTM1-202ENST00000504227 Q6ZWC4 215 aa10.1□□□□□ -0.79
CYSTM1-202ENST00000504227 LINC01551Q86U37 167 aa10.1□□□□□ -0.79
CYSTM1-202ENST00000504227 TMEM256Q8N2U0 113 aa10.1□□□□□ -0.79
CYSTM1-202ENST00000504227 LINC01587Q99440 93 aa10.1□□□□□ -0.79
CYSTM1-202ENST00000504227 KRBOX1C9JBD0 128 aa10.09□□□□□ -0.79
CYSTM1-202ENST00000504227 K7EN84 100 aa10.09□□□□□ -0.79
CYSTM1-202ENST00000504227 SH2D1AO60880 128 aa10.09□□□□□ -0.79
CYSTM1-202ENST00000504227 CRIP1P50238 77 aa10.09□□□□□ -0.79
CYSTM1-202ENST00000504227 RPL23P62829 140 aaKnown RBP10.09□□□□□ -0.79
CYSTM1-202ENST00000504227 OR5I1Q13606 314 aa10.09□□□□□ -0.79
CYSTM1-202ENST00000504227 C1orf158Q8N1D5 194 aa10.09□□□□□ -0.79
CYSTM1-202ENST00000504227 CSNK1G2-AS1Q8NCQ2 148 aa10.09□□□□□ -0.79
CYSTM1-202ENST00000504227 IGHV3OR16-12A0A075B7B8 117 aa10.08□□□□□ -0.8
CYSTM1-202ENST00000504227 H7BYZ3 331 aa10.08□□□□□ -0.8
CYSTM1-202ENST00000504227 ADCYAP1P18509 176 aa10.08□□□□□ -0.8
CYSTM1-202ENST00000504227 PNRC1Q12796 327 aaPredicted RBP10.08□□□□□ -0.8
CYSTM1-202ENST00000504227 DEFB135Q30KP9 77 aa10.08□□□□□ -0.8
CYSTM1-202ENST00000504227 RCHY1Q96PM5 261 aa10.08□□□□□ -0.8
CYSTM1-202ENST00000504227 NBEAL2Q6ZNJ1 2754 aa10.08□□□□□ -0.8
CYSTM1-202ENST00000504227 SPRY2O43597 315 aa10.07□□□□□ -0.8
CYSTM1-202ENST00000504227 ORM1P02763 201 aa10.07□□□□□ -0.8
CYSTM1-202ENST00000504227 RBMY1A1P0DJD3 496 aaKnown RBP10.07□□□□□ -0.8
CYSTM1-202ENST00000504227 RBMY1CP0DJD4 496 aa10.07□□□□□ -0.8
CYSTM1-202ENST00000504227 RBMY1FQ15415 496 aaKnown RBP10.07□□□□□ -0.8
CYSTM1-202ENST00000504227 MUC21Q5SSG8 566 aa10.07□□□□□ -0.8
CYSTM1-202ENST00000504227 C10orf91Q5T1B1 145 aa10.07□□□□□ -0.8
CYSTM1-202ENST00000504227 FAM159AQ6UWV7 190 aa10.07□□□□□ -0.8
CYSTM1-202ENST00000504227 Q6ZQT7 251 aa10.07□□□□□ -0.8
CYSTM1-202ENST00000504227 SBSPONQ8IVN8 264 aa10.07□□□□□ -0.8
CYSTM1-202ENST00000504227 RNF183Q96D59 192 aa10.07□□□□□ -0.8
CYSTM1-202ENST00000504227 KCNS1Q96KK3 526 aa10.07□□□□□ -0.8
CYSTM1-202ENST00000504227 PYGO2Q9BRQ0 406 aa10.07□□□□□ -0.8
CYSTM1-202ENST00000504227 NAGKQ9UJ70 344 aa10.07□□□□□ -0.8
CYSTM1-202ENST00000504227 CARHSP1Q9Y2V2 147 aaKnown RBP10.07□□□□□ -0.8
CYSTM1-202ENST00000504227 IGHV1OR15-1A0A075B7D0 117 aa10.06□□□□□ -0.8
CYSTM1-202ENST00000504227 C19orf71A6NCJ1 209 aa10.06□□□□□ -0.8
CYSTM1-202ENST00000504227 P01737 135 aa10.06□□□□□ -0.8
CYSTM1-202ENST00000504227 HTN1P15515 57 aa10.06□□□□□ -0.8
CYSTM1-202ENST00000504227 ERVFC1-1P60608 527 aa10.06□□□□□ -0.8
CYSTM1-202ENST00000504227 ZNF705AQ6ZN79 300 aaPredicted RBP10.06□□□□□ -0.8
CYSTM1-202ENST00000504227 C15orf54Q8N8G6 183 aa10.06□□□□□ -0.8
CYSTM1-202ENST00000504227 NUDT10Q8NFP7 164 aa10.06□□□□□ -0.8
CYSTM1-202ENST00000504227 ISOC2Q96AB3 205 aa10.06□□□□□ -0.8
CYSTM1-202ENST00000504227 NUDT11Q96G61 164 aa10.06□□□□□ -0.8
CYSTM1-202ENST00000504227 LINC00467Q9BRT7 94 aa10.06□□□□□ -0.8
CYSTM1-202ENST00000504227 TP53TG1Q9Y2A0 90 aa10.06□□□□□ -0.8
CYSTM1-202ENST00000504227 TMEM189A5PLL7 270 aa10.05□□□□□ -0.8
CYSTM1-202ENST00000504227 B4DEV8 164 aa10.05□□□□□ -0.8
CYSTM1-202ENST00000504227 M0R036 132 aa10.05□□□□□ -0.8
CYSTM1-202ENST00000504227 ANXA2RQ3ZCQ2 193 aa10.05□□□□□ -0.8
CYSTM1-202ENST00000504227 IBA57Q5T440 356 aaKnown RBP10.05□□□□□ -0.8
CYSTM1-202ENST00000504227 FAM231DQ6ZW35 169 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms