RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 KLF12Q9Y4X4 402 aa8.32□□□□□ -1.08
MED28-203ENST00000503945 RBAKDNA6NC62 111 aa8.31□□□□□ -1.08
MED28-203ENST00000503945 ACOT6Q3I5F7 207 aaPredicted RBP8.31□□□□□ -1.08
MED28-203ENST00000503945 FAM74A1Q5RGS3 127 aa8.31□□□□□ -1.08
MED28-203ENST00000503945 IBA57Q5T440 356 aaKnown RBP8.31□□□□□ -1.08
MED28-203ENST00000503945 ZFAND2AQ8N6M9 145 aa8.31□□□□□ -1.08
MED28-203ENST00000503945 HYLS1Q96M11 299 aa8.31□□□□□ -1.08
MED28-203ENST00000503945 ARPC5LQ9BPX5 153 aa8.31□□□□□ -1.08
MED28-203ENST00000503945 Q9H3A6 140 aa8.31□□□□□ -1.08
MED28-203ENST00000503945 MBD2Q9UBB5 411 aa8.31□□□□□ -1.08
MED28-203ENST00000503945 PGPA6NDG6 321 aa8.3□□□□□ -1.08
MED28-203ENST00000503945 DIRC3C9JPN6 131 aa8.3□□□□□ -1.08
MED28-203ENST00000503945 SPINK4O60575 86 aa8.3□□□□□ -1.08
MED28-203ENST00000503945 TCL1AP56279 114 aa8.3□□□□□ -1.08
MED28-203ENST00000503945 UBE2L3P68036 154 aaKnown RBP8.3□□□□□ -1.08
MED28-203ENST00000503945 SLAQ13239 276 aa8.3□□□□□ -1.08
MED28-203ENST00000503945 CMTM2Q8TAZ6 248 aa8.3□□□□□ -1.08
MED28-203ENST00000503945 PHYHIPLQ96FC7 376 aa8.3□□□□□ -1.08
MED28-203ENST00000503945 TP53TG3Q9ULZ0 132 aa8.3□□□□□ -1.08
MED28-203ENST00000503945 ZNF266Q14584 549 aa8.29□□□□□ -1.08
MED28-203ENST00000503945 FAM159AQ6UWV7 190 aa8.29□□□□□ -1.08
MED28-203ENST00000503945 WFDC1Q9HC57 220 aa8.29□□□□□ -1.08
MED28-203ENST00000503945 OTORQ9NRC9 128 aa8.29□□□□□ -1.08
MED28-203ENST00000503945 HHLA3Q9XRX5 114 aa8.29□□□□□ -1.08
MED28-203ENST00000503945 LENEPQ9Y5L5 61 aa8.29□□□□□ -1.08
MED28-203ENST00000503945 PAX4O43316 350 aa8.28□□□□□ -1.08
MED28-203ENST00000503945 TTC32Q5I0X7 151 aa8.28□□□□□ -1.08
MED28-203ENST00000503945 PRR9Q5T870 116 aa8.28□□□□□ -1.08
MED28-203ENST00000503945 PQLC2Q6ZP29 291 aa8.28□□□□□ -1.08
MED28-203ENST00000503945 Q6ZQT7 251 aa8.28□□□□□ -1.08
MED28-203ENST00000503945 OR10G4Q8NGN3 311 aa8.28□□□□□ -1.08
MED28-203ENST00000503945 OR10G9Q8NGN4 311 aa8.28□□□□□ -1.08
MED28-203ENST00000503945 OR10G7Q8NGN6 311 aa8.28□□□□□ -1.08
MED28-203ENST00000503945 Q8TAT8 98 aa8.28□□□□□ -1.08
MED28-203ENST00000503945 VSIG2Q96IQ7 327 aa8.28□□□□□ -1.08
MED28-203ENST00000503945 ST6GAL2Q96JF0 529 aa8.28□□□□□ -1.08
MED28-203ENST00000503945 UPK3BQ9BT76 320 aa8.28□□□□□ -1.08
MED28-203ENST00000503945 LRP1BQ9NZR2 4599 aa8.27□□□□□ -1.08
MED28-203ENST00000503945 A0A096LPF7 62 aa8.27□□□□□ -1.09
MED28-203ENST00000503945 IGHV3-53P01767 116 aa8.27□□□□□ -1.09
MED28-203ENST00000503945 TNP2Q05952 138 aa8.27□□□□□ -1.09
MED28-203ENST00000503945 ZNF415Q09FC8 603 aa8.27□□□□□ -1.09
MED28-203ENST00000503945 MUC21Q5SSG8 566 aa8.27□□□□□ -1.09
MED28-203ENST00000503945 ARL6IP6Q8N6S5 226 aa8.27□□□□□ -1.09
MED28-203ENST00000503945 TMED6Q8WW62 240 aa8.27□□□□□ -1.09
MED28-203ENST00000503945 SPXQ9BT56 116 aa8.27□□□□□ -1.09
MED28-203ENST00000503945 MED28Q9H204 178 aa8.27□□□□□ -1.09
MED28-203ENST00000503945 MRPL16Q9NX20 251 aaKnown RBP8.27□□□□□ -1.09
MED28-203ENST00000503945 MDFICQ9P1T7 246 aa8.27□□□□□ -1.09
MED28-203ENST00000503945 PRO0255Q9UI72 69 aa8.27□□□□□ -1.09
MED28-203ENST00000503945 MRPS16Q9Y3D3 137 aaKnown RBP8.27□□□□□ -1.09
MED28-203ENST00000503945 ALG5Q9Y673 324 aa8.27□□□□□ -1.09
MED28-203ENST00000503945 A0A1W2PPQ1 181 aa8.26□□□□□ -1.09
MED28-203ENST00000503945 Q6AWC8 147 aa8.26□□□□□ -1.09
MED28-203ENST00000503945 ICOSQ9Y6W8 199 aa8.26□□□□□ -1.09
MED28-203ENST00000503945 TRGV11A0A075B6L2 103 aa8.25□□□□□ -1.09
MED28-203ENST00000503945 TRGV4A0A0C4DH28 118 aa8.25□□□□□ -1.09
MED28-203ENST00000503945 HMGB3O15347 200 aaKnown RBP8.25□□□□□ -1.09
MED28-203ENST00000503945 EIF3GO75821 320 aaKnown RBP eCLIP8.25□□□□□ -1.09
MED28-203ENST00000503945 MBP02144 154 aa8.25□□□□□ -1.09
MED28-203ENST00000503945 BTF3P20290 206 aaKnown RBP8.25□□□□□ -1.09
MED28-203ENST00000503945 FHL2Q14192 279 aa8.25□□□□□ -1.09
MED28-203ENST00000503945 MRPL23Q16540 153 aaKnown RBP8.25□□□□□ -1.09
MED28-203ENST00000503945 TMEM183BQ1AE95 376 aa8.25□□□□□ -1.09
MED28-203ENST00000503945 TMEM183AQ8IXX5 376 aa8.25□□□□□ -1.09
MED28-203ENST00000503945 RASL10AQ92737 203 aa8.25□□□□□ -1.09
MED28-203ENST00000503945 C8orf49Q96NF6 230 aa8.25□□□□□ -1.09
MED28-203ENST00000503945 RPH3ALQ9UNE2 315 aa8.25□□□□□ -1.09
MED28-203ENST00000503945 TRAV21A0A0B4J279 112 aa8.24□□□□□ -1.09
MED28-203ENST00000503945 C16orf90A8MZG2 172 aa8.24□□□□□ -1.09
MED28-203ENST00000503945 GNRH2O43555 120 aa8.24□□□□□ -1.09
MED28-203ENST00000503945 PTTG1O95997 202 aa8.24□□□□□ -1.09
MED28-203ENST00000503945 CRYBA4P53673 196 aa8.24□□□□□ -1.09
MED28-203ENST00000503945 RAB2AP61019 212 aa8.24□□□□□ -1.09
MED28-203ENST00000503945 SERF2P84101 59 aa8.24□□□□□ -1.09
MED28-203ENST00000503945 GOLT1AQ6ZVE7 132 aa8.24□□□□□ -1.09
MED28-203ENST00000503945 IQCF2Q8IXL9 164 aa8.24□□□□□ -1.09
MED28-203ENST00000503945 HSD17B11Q8NBQ5 300 aa8.24□□□□□ -1.09
MED28-203ENST00000503945 INO80EQ8NBZ0 244 aaPredicted RBP8.24□□□□□ -1.09
MED28-203ENST00000503945 TREM1Q9NP99 234 aa8.24□□□□□ -1.09
MED28-203ENST00000503945 NAGKQ9UJ70 344 aa8.24□□□□□ -1.09
MED28-203ENST00000503945 K7EQM0 130 aa8.23□□□□□ -1.09
MED28-203ENST00000503945 SIVA1O15304 175 aa8.23□□□□□ -1.09
MED28-203ENST00000503945 TDRG1Q3Y452 100 aa8.23□□□□□ -1.09
MED28-203ENST00000503945 LYPD5Q6UWN5 251 aa8.23□□□□□ -1.09
MED28-203ENST00000503945 NEGR1Q7Z3B1 354 aa8.23□□□□□ -1.09
MED28-203ENST00000503945 RAB24Q969Q5 203 aa8.23□□□□□ -1.09
MED28-203ENST00000503945 KCNS1Q96KK3 526 aa8.23□□□□□ -1.09
MED28-203ENST00000503945 PSMG3Q9BT73 122 aaPredicted RBP8.23□□□□□ -1.09
MED28-203ENST00000503945 TRAV9-2A0A087WT02 112 aa8.22□□□□□ -1.09
MED28-203ENST00000503945 SERTM2A0A1B0GWG4 89 aa8.22□□□□□ -1.09
MED28-203ENST00000503945 M0R2P5 195 aa8.22□□□□□ -1.09
MED28-203ENST00000503945 CDK2AP2O75956 126 aa8.22□□□□□ -1.09
MED28-203ENST00000503945 STAG3L2P0CL84 134 aa8.22□□□□□ -1.09
MED28-203ENST00000503945 STAG3L3P0CL85 134 aa8.22□□□□□ -1.09
MED28-203ENST00000503945 ARL14EPLP0DKL9 152 aa8.22□□□□□ -1.09
MED28-203ENST00000503945 CDC34P49427 236 aaPredicted RBP8.22□□□□□ -1.09
MED28-203ENST00000503945 MAPKAPK5-AS1Q8N8E1 139 aa8.22□□□□□ -1.09
MED28-203ENST00000503945 OR4C5Q8NGB2 326 aa8.22□□□□□ -1.09
MED28-203ENST00000503945 OR2G3Q8NGZ4 309 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms