RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 GDF5OSQ5U4N7 250 aa16.59■□□□□ 0.25
PTPN13-205ENST00000502971 LINC01006Q8NI28 216 aa16.59■□□□□ 0.25
PTPN13-205ENST00000502971 CAMPP49913 170 aa16.58■□□□□ 0.24
PTPN13-205ENST00000502971 OR8A1Q8NGG7 326 aa16.58■□□□□ 0.24
PTPN13-205ENST00000502971 A0A1B0GUT8 65 aa16.57■□□□□ 0.24
PTPN13-205ENST00000502971 IFITM10A6NMD0 228 aa16.57■□□□□ 0.24
PTPN13-205ENST00000502971 NDUFA7O95182 113 aa16.57■□□□□ 0.24
PTPN13-205ENST00000502971 CRISP2P16562 243 aa16.57■□□□□ 0.24
PTPN13-205ENST00000502971 S100A2P29034 98 aa16.57■□□□□ 0.24
PTPN13-205ENST00000502971 RIGQ13278 110 aa16.57■□□□□ 0.24
PTPN13-205ENST00000502971 SELENOKQ9Y6D0 94 aa16.57■□□□□ 0.24
PTPN13-205ENST00000502971 FN1P02751 2386 aaKnown RBP16.57■□□□□ 0.24
PTPN13-205ENST00000502971 TRBV7-9A0A0J9YWB2 115 aa16.56■□□□□ 0.24
PTPN13-205ENST00000502971 A0A1B0GW15 77 aa16.56■□□□□ 0.24
PTPN13-205ENST00000502971 ZNF705DP0CH99 300 aaPredicted RBP16.56■□□□□ 0.24
PTPN13-205ENST00000502971 ZNF705BP0CI00 300 aaPredicted RBP16.56■□□□□ 0.24
PTPN13-205ENST00000502971 LINC01559Q495D7 138 aa16.56■□□□□ 0.24
PTPN13-205ENST00000502971 WFDC3Q8IUB2 231 aa16.56■□□□□ 0.24
PTPN13-205ENST00000502971 BORCS7Q96B45 105 aa16.56■□□□□ 0.24
PTPN13-205ENST00000502971 K7EQG2 157 aa16.56■□□□□ 0.24
PTPN13-205ENST00000502971 SLAQ13239 276 aa16.56■□□□□ 0.24
PTPN13-205ENST00000502971 OR9G4Q8NGQ1 327 aa16.56■□□□□ 0.24
PTPN13-205ENST00000502971 TMSB15BA0A087X1C1 80 aa16.55■□□□□ 0.24
PTPN13-205ENST00000502971 ORM1P02763 201 aa16.55■□□□□ 0.24
PTPN13-205ENST00000502971 SNRPD3P62318 126 aaKnown RBP16.55■□□□□ 0.24
PTPN13-205ENST00000502971 Q0VG73 95 aa16.55■□□□□ 0.24
PTPN13-205ENST00000502971 TCF21O43680 179 aa16.54■□□□□ 0.24
PTPN13-205ENST00000502971 CD28P10747 220 aa16.54■□□□□ 0.24
PTPN13-205ENST00000502971 KIAA1644Q3SXP7 199 aa16.54■□□□□ 0.24
PTPN13-205ENST00000502971 PDZD11Q5EBL8 140 aa16.54■□□□□ 0.24
PTPN13-205ENST00000502971 ADAMTSL5Q6ZMM2 481 aa16.54■□□□□ 0.24
PTPN13-205ENST00000502971 LINC00518Q8N0U6 118 aa16.54■□□□□ 0.24
PTPN13-205ENST00000502971 FAM19A4Q96LR4 140 aa16.54■□□□□ 0.24
PTPN13-205ENST00000502971 GRIFINA4D1Z8 144 aa16.53■□□□□ 0.24
PTPN13-205ENST00000502971 PAFAH1B2P68402 229 aa16.53■□□□□ 0.24
PTPN13-205ENST00000502971 TSSC4Q9Y5U2 329 aaPredicted RBP16.53■□□□□ 0.24
PTPN13-205ENST00000502971 ARMS2P0C7Q2 107 aa16.53■□□□□ 0.24
PTPN13-205ENST00000502971 OR10J3Q5JRS4 329 aa16.53■□□□□ 0.24
PTPN13-205ENST00000502971 GATD1Q8NB37 220 aa16.53■□□□□ 0.24
PTPN13-205ENST00000502971 DLX4Q92988 240 aaPredicted RBP16.53■□□□□ 0.24
PTPN13-205ENST00000502971 DUX3Q96PT4 197 aa16.53■□□□□ 0.24
PTPN13-205ENST00000502971 F6UB75 175 aa16.52■□□□□ 0.24
PTPN13-205ENST00000502971 IGLC6P0CF74 106 aa16.52■□□□□ 0.24
PTPN13-205ENST00000502971 TFPI2P48307 235 aa16.52■□□□□ 0.24
PTPN13-205ENST00000502971 LYZL1Q6UWQ5 148 aa16.52■□□□□ 0.24
PTPN13-205ENST00000502971 TPPP3Q9BW30 176 aa16.52■□□□□ 0.24
PTPN13-205ENST00000502971 SSBP4Q9BWG4 385 aaPredicted RBP16.52■□□□□ 0.24
PTPN13-205ENST00000502971 CTRLP40313 264 aa16.51■□□□□ 0.23
PTPN13-205ENST00000502971 DEFB1P60022 68 aa16.51■□□□□ 0.23
PTPN13-205ENST00000502971 FHL3Q13643 280 aa16.51■□□□□ 0.23
PTPN13-205ENST00000502971 ZNF575Q86XF7 245 aa16.51■□□□□ 0.23
PTPN13-205ENST00000502971 ZFAND2AQ8N6M9 145 aa16.51■□□□□ 0.23
PTPN13-205ENST00000502971 FER1L6-AS1Q8NA97 138 aa16.51■□□□□ 0.23
PTPN13-205ENST00000502971 RAX2Q96IS3 184 aa16.51■□□□□ 0.23
PTPN13-205ENST00000502971 SRIP30626 198 aa16.5■□□□□ 0.23
PTPN13-205ENST00000502971 APRG1Q8IVJ8 170 aa16.5■□□□□ 0.23
PTPN13-205ENST00000502971 HIST1H2BLQ99880 126 aa16.5■□□□□ 0.23
PTPN13-205ENST00000502971 CUBNO60494 3623 aa16.5■□□□□ 0.23
PTPN13-205ENST00000502971 TRAV2A0A0B4J234 112 aa16.5■□□□□ 0.23
PTPN13-205ENST00000502971 CSN3P07498 182 aa16.5■□□□□ 0.23
PTPN13-205ENST00000502971 ZNF688P0C7X2 276 aa16.5■□□□□ 0.23
PTPN13-205ENST00000502971 FABP4P15090 132 aa16.5■□□□□ 0.23
PTPN13-205ENST00000502971 PSMG4Q5JS54 123 aa16.5■□□□□ 0.23
PTPN13-205ENST00000502971 C11orf44Q8N8P7 122 aa16.5■□□□□ 0.23
PTPN13-205ENST00000502971 CITED2Q99967 270 aaPredicted RBP16.5■□□□□ 0.23
PTPN13-205ENST00000502971 TP53TG3Q9ULZ0 132 aa16.5■□□□□ 0.23
PTPN13-205ENST00000502971 IGKV3D-20A0A0C4DH25 116 aa16.49■□□□□ 0.23
PTPN13-205ENST00000502971 SMIM6P0DI80 62 aa16.49■□□□□ 0.23
PTPN13-205ENST00000502971 BAGE3Q86Y29 109 aa16.49■□□□□ 0.23
PTPN13-205ENST00000502971 LURAP1LQ8IV03 231 aa16.49■□□□□ 0.23
PTPN13-205ENST00000502971 TMEM256Q8N2U0 113 aa16.49■□□□□ 0.23
PTPN13-205ENST00000502971 RNF114Q9Y508 228 aa16.49■□□□□ 0.23
PTPN13-205ENST00000502971 TRAV21A0A0B4J279 112 aa16.48■□□□□ 0.23
PTPN13-205ENST00000502971 CCL24O00175 119 aa16.48■□□□□ 0.23
PTPN13-205ENST00000502971 PRR9Q5T870 116 aa16.48■□□□□ 0.23
PTPN13-205ENST00000502971 C11orf21Q9P2W6 132 aa16.48■□□□□ 0.23
PTPN13-205ENST00000502971 A0A1B0GUS0 222 aa16.48■□□□□ 0.23
PTPN13-205ENST00000502971 F2Z2F3 143 aa16.48■□□□□ 0.23
PTPN13-205ENST00000502971 ESDP10768 282 aa16.48■□□□□ 0.23
PTPN13-205ENST00000502971 HIST2H2BDQ6DRA6 164 aa16.48■□□□□ 0.23
PTPN13-205ENST00000502971 OR10D4PQ8NGN7 298 aa16.48■□□□□ 0.23
PTPN13-205ENST00000502971 TMEM18Q96B42 140 aa16.48■□□□□ 0.23
PTPN13-205ENST00000502971 ALKBH7Q9BT30 221 aaPredicted RBP16.48■□□□□ 0.23
PTPN13-205ENST00000502971 A0A1W2PRX2 142 aa16.47■□□□□ 0.23
PTPN13-205ENST00000502971 AMBPP02760 352 aa16.47■□□□□ 0.23
PTPN13-205ENST00000502971 GPX1P07203 203 aa16.47■□□□□ 0.23
PTPN13-205ENST00000502971 ZNF493Q6ZR52 646 aa16.47■□□□□ 0.23
PTPN13-205ENST00000502971 PACRGQ96M98 296 aaPredicted RBP16.47■□□□□ 0.23
PTPN13-205ENST00000502971 ODF3Q96PU9 254 aa16.47■□□□□ 0.23
PTPN13-205ENST00000502971 A0A0J9YX75 114 aa16.46■□□□□ 0.23
PTPN13-205ENST00000502971 PROK1P58294 105 aa16.46■□□□□ 0.23
PTPN13-205ENST00000502971 EBLN2Q6P2I7 272 aa16.46■□□□□ 0.23
PTPN13-205ENST00000502971 DYNLRB2Q8TF09 96 aa16.46■□□□□ 0.23
PTPN13-205ENST00000502971 CNFNQ9BYD5 112 aa16.46■□□□□ 0.23
PTPN13-205ENST00000502971 C12orf57Q99622 126 aa16.45■□□□□ 0.22
PTPN13-205ENST00000502971 LOC102724200A0A096LPH7 203 aaPredicted RBP16.45■□□□□ 0.22
PTPN13-205ENST00000502971 SERF1AO75920 110 aa16.45■□□□□ 0.22
PTPN13-205ENST00000502971 KLLNB2CW77 178 aa16.44■□□□□ 0.22
PTPN13-205ENST00000502971 J3KRW8 73 aa16.44■□□□□ 0.22
PTPN13-205ENST00000502971 NUPR1O60356 82 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms