RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 CRIP2P52943 208 aaPredicted RBP7.54□□□□□ -1.2
CLIP1-204ENST00000501271 HIST1H1AQ02539 215 aaPredicted RBP7.54□□□□□ -1.2
CLIP1-204ENST00000501271 ANKRD39Q53RE8 183 aa7.54□□□□□ -1.2
CLIP1-204ENST00000501271 FAM223AQ8IWN6 122 aa7.54□□□□□ -1.2
CLIP1-204ENST00000501271 SNAI2O43623 268 aa7.53□□□□□ -1.2
CLIP1-204ENST00000501271 GATA1P15976 413 aaPredicted RBP7.53□□□□□ -1.2
CLIP1-204ENST00000501271 EVI2AP22794 236 aa7.53□□□□□ -1.2
CLIP1-204ENST00000501271 ARL3P36405 182 aa7.53□□□□□ -1.2
CLIP1-204ENST00000501271 LGALS9BQ3B8N2 356 aa7.53□□□□□ -1.2
CLIP1-204ENST00000501271 LGALS9CQ6DKI2 356 aa7.53□□□□□ -1.2
CLIP1-204ENST00000501271 UNQ9165/PRO28630Q6UXU0 137 aa7.53□□□□□ -1.2
CLIP1-204ENST00000501271 C9orf47Q6ZRZ4 202 aa7.53□□□□□ -1.2
CLIP1-204ENST00000501271 C2orf91Q6ZV80 131 aa7.53□□□□□ -1.2
CLIP1-204ENST00000501271 WFDC3Q8IUB2 231 aa7.53□□□□□ -1.2
CLIP1-204ENST00000501271 ZNF738Q8NE65 137 aa7.53□□□□□ -1.2
CLIP1-204ENST00000501271 GLMPQ8WWB7 406 aa7.53□□□□□ -1.2
CLIP1-204ENST00000501271 C20orf173Q96LM9 149 aa7.53□□□□□ -1.2
CLIP1-204ENST00000501271 PIMREGQ9BSJ6 248 aa7.53□□□□□ -1.2
CLIP1-204ENST00000501271 MAP1LC3AQ9H492 121 aa7.53□□□□□ -1.2
CLIP1-204ENST00000501271 IGHV7-4-1A0A0J9YVY3 117 aa7.53□□□□□ -1.2
CLIP1-204ENST00000501271 SMAD7O15105 426 aaKnown RBP7.53□□□□□ -1.2
CLIP1-204ENST00000501271 CCL25O15444 150 aa7.53□□□□□ -1.2
CLIP1-204ENST00000501271 TNFRSF6BO95407 300 aa7.53□□□□□ -1.2
CLIP1-204ENST00000501271 LY6EQ16553 131 aa7.53□□□□□ -1.2
CLIP1-204ENST00000501271 PRR9Q5T870 116 aa7.53□□□□□ -1.2
CLIP1-204ENST00000501271 IFI27L1Q96BM0 104 aa7.53□□□□□ -1.2
CLIP1-204ENST00000501271 PPBPP02775 128 aa7.52□□□□□ -1.2
CLIP1-204ENST00000501271 FGF6P10767 208 aa7.52□□□□□ -1.2
CLIP1-204ENST00000501271 TCTAP57738 103 aa7.52□□□□□ -1.2
CLIP1-204ENST00000501271 GPHB5Q86YW7 130 aa7.52□□□□□ -1.2
CLIP1-204ENST00000501271 C10orf105Q8TEF2 133 aa7.52□□□□□ -1.2
CLIP1-204ENST00000501271 C16orf92Q96LL3 132 aa7.52□□□□□ -1.2
CLIP1-204ENST00000501271 CCL19Q99731 98 aa7.52□□□□□ -1.2
CLIP1-204ENST00000501271 MEGF9Q9H1U4 602 aa7.52□□□□□ -1.2
CLIP1-204ENST00000501271 CRYBG3Q68DQ2 2970 aa7.52□□□□□ -1.21
CLIP1-204ENST00000501271 LINC01546A6NGU7 62 aa7.52□□□□□ -1.21
CLIP1-204ENST00000501271 ERASQ7Z444 233 aa7.52□□□□□ -1.21
CLIP1-204ENST00000501271 C18orf15Q96N68 181 aa7.52□□□□□ -1.21
CLIP1-204ENST00000501271 ATP6V0BQ99437 205 aa7.52□□□□□ -1.21
CLIP1-204ENST00000501271 HIF1ANQ9NWT6 349 aa7.52□□□□□ -1.21
CLIP1-204ENST00000501271 TAX1BP3O14907 124 aa7.51□□□□□ -1.21
CLIP1-204ENST00000501271 IGF1P05019 195 aa7.51□□□□□ -1.21
CLIP1-204ENST00000501271 PTTG1IPP53801 180 aa7.51□□□□□ -1.21
CLIP1-204ENST00000501271 LCE2DQ5TA82 110 aaPredicted RBP7.51□□□□□ -1.21
CLIP1-204ENST00000501271 C12orf54Q6X4T0 127 aa7.51□□□□□ -1.21
CLIP1-204ENST00000501271 FLNCQ14315 2725 aa7.51□□□□□ -1.21
CLIP1-204ENST00000501271 SPG11Q96JI7 2443 aa7.51□□□□□ -1.21
CLIP1-204ENST00000501271 H3BUX3 64 aa7.51□□□□□ -1.21
CLIP1-204ENST00000501271 IGHV3-11P01762 117 aa7.51□□□□□ -1.21
CLIP1-204ENST00000501271 LEPP41159 167 aa7.51□□□□□ -1.21
CLIP1-204ENST00000501271 C9orf139Q6ZV77 190 aa7.51□□□□□ -1.21
CLIP1-204ENST00000501271 CSMD2Q7Z408 3487 aa7.51□□□□□ -1.21
CLIP1-204ENST00000501271 DEFB125Q8N687 156 aa7.51□□□□□ -1.21
CLIP1-204ENST00000501271 DPF1Q92782 380 aa7.51□□□□□ -1.21
CLIP1-204ENST00000501271 NPFFR1Q9GZQ6 430 aa7.51□□□□□ -1.21
CLIP1-204ENST00000501271 PPP1R14DQ9NXH3 145 aa7.51□□□□□ -1.21
CLIP1-204ENST00000501271 IGHV4-30-2A0A087WSY4 118 aa7.5□□□□□ -1.21
CLIP1-204ENST00000501271 DEFB1P60022 68 aa7.5□□□□□ -1.21
CLIP1-204ENST00000501271 UBE2V1Q13404 147 aa7.5□□□□□ -1.21
CLIP1-204ENST00000501271 Q6ZS46 218 aa7.5□□□□□ -1.21
CLIP1-204ENST00000501271 KLK15Q9H2R5 256 aa7.5□□□□□ -1.21
CLIP1-204ENST00000501271 DKK2Q9UBU2 259 aa7.5□□□□□ -1.21
CLIP1-204ENST00000501271 IGLV2-18A0A075B6J9 118 aa7.5□□□□□ -1.21
CLIP1-204ENST00000501271 TRAV26-2A0A0B4J265 109 aa7.5□□□□□ -1.21
CLIP1-204ENST00000501271 J3KRW8 73 aa7.5□□□□□ -1.21
CLIP1-204ENST00000501271 NDUFA4O00483 81 aa7.5□□□□□ -1.21
CLIP1-204ENST00000501271 SOCS3O14543 225 aa7.5□□□□□ -1.21
CLIP1-204ENST00000501271 IGHG2P01859 326 aa7.5□□□□□ -1.21
CLIP1-204ENST00000501271 LCNL1Q6ZST4 164 aa7.5□□□□□ -1.21
CLIP1-204ENST00000501271 NXT2Q9NPJ8 142 aaKnown RBP7.5□□□□□ -1.21
CLIP1-204ENST00000501271 UFC1Q9Y3C8 167 aa7.5□□□□□ -1.21
CLIP1-204ENST00000501271 UTP20O75691 2785 aaKnown RBP7.5□□□□□ -1.21
CLIP1-204ENST00000501271 A6NDX4 124 aa7.49□□□□□ -1.21
CLIP1-204ENST00000501271 H3BVH4 76 aa7.49□□□□□ -1.21
CLIP1-204ENST00000501271 FCER1GP30273 86 aa7.49□□□□□ -1.21
CLIP1-204ENST00000501271 BLCAPP62952 87 aa7.49□□□□□ -1.21
CLIP1-204ENST00000501271 OR1N2Q8NGR9 330 aa7.49□□□□□ -1.21
CLIP1-204ENST00000501271 TMEM238LA0A1B0GVL6 79 aa7.49□□□□□ -1.21
CLIP1-204ENST00000501271 ATP5J2P56134 94 aa7.49□□□□□ -1.21
CLIP1-204ENST00000501271 CLEC2AQ6UVW9 174 aa7.49□□□□□ -1.21
CLIP1-204ENST00000501271 BOD1L2Q8IYS8 172 aa7.49□□□□□ -1.21
CLIP1-204ENST00000501271 NRACQ8N912 160 aa7.49□□□□□ -1.21
CLIP1-204ENST00000501271 OR2K2Q8NGT1 345 aa7.49□□□□□ -1.21
CLIP1-204ENST00000501271 PIEZO1Q92508 2521 aa7.49□□□□□ -1.21
CLIP1-204ENST00000501271 USP9XQ93008 2570 aaPredicted RBP7.48□□□□□ -1.21
CLIP1-204ENST00000501271 IGHV4-4A0A075B6R2 117 aa7.48□□□□□ -1.21
CLIP1-204ENST00000501271 NDUFS8O00217 210 aa7.48□□□□□ -1.21
CLIP1-204ENST00000501271 SPANXN1Q5VSR9 72 aa7.48□□□□□ -1.21
CLIP1-204ENST00000501271 ZFAND2AQ8N6M9 145 aa7.48□□□□□ -1.21
CLIP1-204ENST00000501271 Q8N8P6 123 aa7.48□□□□□ -1.21
CLIP1-204ENST00000501271 TMEM158Q8WZ71 300 aa7.48□□□□□ -1.21
CLIP1-204ENST00000501271 SELENOKQ9Y6D0 94 aa7.48□□□□□ -1.21
CLIP1-204ENST00000501271 IGSF10Q6WRI0 2623 aa7.48□□□□□ -1.21
CLIP1-204ENST00000501271 CBY3A6NI87 242 aa7.48□□□□□ -1.21
CLIP1-204ENST00000501271 MSMBP08118 114 aa7.48□□□□□ -1.21
CLIP1-204ENST00000501271 PF4V1P10720 104 aa7.48□□□□□ -1.21
CLIP1-204ENST00000501271 ODF1Q14990 250 aa7.48□□□□□ -1.21
CLIP1-204ENST00000501271 VAMP3Q15836 100 aa7.48□□□□□ -1.21
CLIP1-204ENST00000501271 OR4X2Q8NGF9 303 aa7.48□□□□□ -1.21
CLIP1-204ENST00000501271 USMG5Q96IX5 58 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms