RNA–Protein interactions for RNA: ENST00000499006.6

LINC01550-201, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 1 (best)

Gene LINC01550, Length 1,458 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-201ENST00000499006 GPX1P07203 203 aa14.26□□□□□ -0.13
LINC01550-201ENST00000499006 GNG4P50150 75 aa14.26□□□□□ -0.13
LINC01550-201ENST00000499006 DEFA6Q01524 100 aa14.26□□□□□ -0.13
LINC01550-201ENST00000499006 DEFB121Q5J5C9 76 aa14.26□□□□□ -0.13
LINC01550-201ENST00000499006 GFI1BQ5VTD9 330 aa14.26□□□□□ -0.13
LINC01550-201ENST00000499006 CSNK1G2-AS1Q8NCQ2 148 aa14.26□□□□□ -0.13
LINC01550-201ENST00000499006 MRAPQ8TCY5 172 aa14.26□□□□□ -0.13
LINC01550-201ENST00000499006 SMIM12Q96EX1 92 aa14.26□□□□□ -0.13
LINC01550-201ENST00000499006 C1QTNF4Q9BXJ3 329 aa14.26□□□□□ -0.13
LINC01550-201ENST00000499006 ZNF727A8MUV8 499 aa14.25□□□□□ -0.13
LINC01550-201ENST00000499006 J3KRW8 73 aa14.25□□□□□ -0.13
LINC01550-201ENST00000499006 UBE2CO00762 179 aa14.25□□□□□ -0.13
LINC01550-201ENST00000499006 BTN1A1Q13410 526 aa14.25□□□□□ -0.13
LINC01550-201ENST00000499006 FAM74A3Q4VXF1 159 aa14.25□□□□□ -0.13
LINC01550-201ENST00000499006 SOHLH1Q5JUK2 328 aa14.25□□□□□ -0.13
LINC01550-201ENST00000499006 NHLRC2Q8NBF2 726 aa14.25□□□□□ -0.13
LINC01550-201ENST00000499006 ZC2HC1AQ96GY0 325 aa14.25□□□□□ -0.13
LINC01550-201ENST00000499006 C7orf71A4D174 169 aa14.25□□□□□ -0.13
LINC01550-201ENST00000499006 PGPEP1LA6NFU8 196 aa14.25□□□□□ -0.13
LINC01550-201ENST00000499006 ZNF80P51504 273 aaPredicted RBP14.25□□□□□ -0.13
LINC01550-201ENST00000499006 SMUG1Q53HV7 270 aa14.25□□□□□ -0.13
LINC01550-201ENST00000499006 Q6AWC8 147 aa14.25□□□□□ -0.13
LINC01550-201ENST00000499006 TMEM218A2RU14 115 aa14.24□□□□□ -0.13
LINC01550-201ENST00000499006 ZNF324O75467 553 aaPredicted RBP14.24□□□□□ -0.13
LINC01550-201ENST00000499006 RBMY1A1P0DJD3 496 aaKnown RBP14.24□□□□□ -0.13
LINC01550-201ENST00000499006 RBMY1CP0DJD4 496 aa14.24□□□□□ -0.13
LINC01550-201ENST00000499006 RNASE4P34096 147 aaKnown RBP14.24□□□□□ -0.13
LINC01550-201ENST00000499006 RBMY1FQ15415 496 aaKnown RBP14.24□□□□□ -0.13
LINC01550-201ENST00000499006 LY96Q9Y6Y9 160 aa14.24□□□□□ -0.13
LINC01550-201ENST00000499006 NBEAL2Q6ZNJ1 2754 aa14.23□□□□□ -0.13
LINC01550-201ENST00000499006 GCGP01275 180 aa14.23□□□□□ -0.13
LINC01550-201ENST00000499006 INSP01308 110 aa14.23□□□□□ -0.13
LINC01550-201ENST00000499006 CRIP1P50238 77 aa14.23□□□□□ -0.13
LINC01550-201ENST00000499006 NDUFA5Q16718 116 aa14.23□□□□□ -0.13
LINC01550-201ENST00000499006 Q6ZQT7 251 aa14.23□□□□□ -0.13
LINC01550-201ENST00000499006 SLC7A5P1Q8MH63 180 aa14.23□□□□□ -0.13
LINC01550-201ENST00000499006 OCC1Q8TAD7 63 aa14.23□□□□□ -0.13
LINC01550-201ENST00000499006 C20orf144Q9BQM9 153 aa14.23□□□□□ -0.13
LINC01550-201ENST00000499006 TRAV12-3A0A0B4J271 114 aa14.22□□□□□ -0.13
LINC01550-201ENST00000499006 Q6ZWC4 215 aa14.22□□□□□ -0.13
LINC01550-201ENST00000499006 C1orf158Q8N1D5 194 aa14.22□□□□□ -0.13
LINC01550-201ENST00000499006 K7EN84 100 aa14.21□□□□□ -0.13
LINC01550-201ENST00000499006 ADCYAP1P18509 176 aa14.21□□□□□ -0.13
LINC01550-201ENST00000499006 SBSPONQ8IVN8 264 aa14.21□□□□□ -0.13
LINC01550-201ENST00000499006 PFN1P07737 140 aaKnown RBP14.2□□□□□ -0.14
LINC01550-201ENST00000499006 TMEM241Q24JQ0 296 aa14.2□□□□□ -0.14
LINC01550-201ENST00000499006 LINC01551Q86U37 167 aa14.2□□□□□ -0.14
LINC01550-201ENST00000499006 NAT8Q9UHE5 227 aa14.2□□□□□ -0.14
LINC01550-201ENST00000499006 PRKDCP78527 4128 aaKnown RBP14.2□□□□□ -0.14
LINC01550-201ENST00000499006 TRAV21A0A0B4J279 112 aa14.19□□□□□ -0.14
LINC01550-201ENST00000499006 DEFB135Q30KP9 77 aa14.19□□□□□ -0.14
LINC01550-201ENST00000499006 FAM162BQ5T6X4 162 aa14.19□□□□□ -0.14
LINC01550-201ENST00000499006 ZNF705AQ6ZN79 300 aaPredicted RBP14.19□□□□□ -0.14
LINC01550-201ENST00000499006 TMEM256Q8N2U0 113 aa14.19□□□□□ -0.14
LINC01550-201ENST00000499006 NIPSNAP3BQ9BS92 247 aa14.19□□□□□ -0.14
LINC01550-201ENST00000499006 FABP5P3A8MUU1 101 aa14.18□□□□□ -0.14
LINC01550-201ENST00000499006 MGST1P10620 155 aaKnown RBP14.18□□□□□ -0.14
LINC01550-201ENST00000499006 RNF183Q96D59 192 aa14.18□□□□□ -0.14
LINC01550-201ENST00000499006 SEC11CQ9BY50 192 aa14.18□□□□□ -0.14
LINC01550-201ENST00000499006 SDF2L1Q9HCN8 221 aa14.18□□□□□ -0.14
LINC01550-201ENST00000499006 SH2D1AO60880 128 aa14.18□□□□□ -0.14
LINC01550-201ENST00000499006 RPL23P62829 140 aaKnown RBP14.18□□□□□ -0.14
LINC01550-201ENST00000499006 OR5I1Q13606 314 aa14.18□□□□□ -0.14
LINC01550-201ENST00000499006 C10orf91Q5T1B1 145 aa14.18□□□□□ -0.14
LINC01550-201ENST00000499006 RCHY1Q96PM5 261 aa14.18□□□□□ -0.14
LINC01550-201ENST00000499006 B9D2Q9BPU9 175 aa14.18□□□□□ -0.14
LINC01550-201ENST00000499006 GOLT1BQ9Y3E0 138 aa14.18□□□□□ -0.14
LINC01550-201ENST00000499006 COL7A1Q02388 2944 aa14.17□□□□□ -0.14
LINC01550-201ENST00000499006 DNAH9Q9NYC9 4486 aa14.17□□□□□ -0.14
LINC01550-201ENST00000499006 F8W036 122 aa14.17□□□□□ -0.14
LINC01550-201ENST00000499006 H7BYZ3 331 aa14.17□□□□□ -0.14
LINC01550-201ENST00000499006 PRR27Q6MZM9 219 aa14.17□□□□□ -0.14
LINC01550-201ENST00000499006 TM2D3Q9BRN9 247 aa14.17□□□□□ -0.14
LINC01550-201ENST00000499006 BIN3Q9NQY0 253 aa14.17□□□□□ -0.14
LINC01550-201ENST00000499006 C11orf21Q9P2W6 132 aa14.17□□□□□ -0.14
LINC01550-201ENST00000499006 TP53TG1Q9Y2A0 90 aa14.17□□□□□ -0.14
LINC01550-201ENST00000499006 C19orf71A6NCJ1 209 aa14.16□□□□□ -0.14
LINC01550-201ENST00000499006 PYGO2Q9BRQ0 406 aa14.16□□□□□ -0.14
LINC01550-201ENST00000499006 LINC00467Q9BRT7 94 aa14.16□□□□□ -0.14
LINC01550-201ENST00000499006 SPRY2O43597 315 aa14.15□□□□□ -0.14
LINC01550-201ENST00000499006 TDRG1Q3Y452 100 aa14.15□□□□□ -0.14
LINC01550-201ENST00000499006 LINC01587Q99440 93 aa14.15□□□□□ -0.14
LINC01550-201ENST00000499006 OVOL2Q9BRP0 275 aa14.15□□□□□ -0.14
LINC01550-201ENST00000499006 TMEM208Q9BTX3 173 aa14.15□□□□□ -0.14
LINC01550-201ENST00000499006 X6R8D5 127 aa14.15□□□□□ -0.14
LINC01550-201ENST00000499006 IGHV3OR16-12A0A075B7B8 117 aa14.14□□□□□ -0.15
LINC01550-201ENST00000499006 ISOC2Q96AB3 205 aa14.14□□□□□ -0.15
LINC01550-201ENST00000499006 NEU1Q99519 415 aa14.14□□□□□ -0.15
LINC01550-201ENST00000499006 HUWE1Q7Z6Z7 4374 aaKnown RBP14.13□□□□□ -0.15
LINC01550-201ENST00000499006 IGHV1OR15-1A0A075B7D0 117 aa14.13□□□□□ -0.15
LINC01550-201ENST00000499006 PRM2P04554 102 aa14.13□□□□□ -0.15
LINC01550-201ENST00000499006 ANXA2RQ3ZCQ2 193 aa14.13□□□□□ -0.15
LINC01550-201ENST00000499006 MUC21Q5SSG8 566 aa14.13□□□□□ -0.15
LINC01550-201ENST00000499006 ZNF575Q86XF7 245 aa14.13□□□□□ -0.15
LINC01550-201ENST00000499006 RETNQ9HD89 108 aa14.13□□□□□ -0.15
LINC01550-201ENST00000499006 CARHSP1Q9Y2V2 147 aaKnown RBP14.13□□□□□ -0.15
LINC01550-201ENST00000499006 IGKV3D-20A0A0C4DH25 116 aa14.12□□□□□ -0.15
LINC01550-201ENST00000499006 PNRC1Q12796 327 aaPredicted RBP14.12□□□□□ -0.15
LINC01550-201ENST00000499006 ADIRFQ15847 76 aa14.12□□□□□ -0.15
LINC01550-201ENST00000499006 LINC01559Q495D7 138 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms