RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 RASL10AQ92737 203 aa4.57□□□□□ -1.68
SOX2-OT-218ENST00000498731 RETNQ9HD89 108 aa4.57□□□□□ -1.68
SOX2-OT-218ENST00000498731 SMKR1H3BMG3 65 aa4.56□□□□□ -1.68
SOX2-OT-218ENST00000498731 J3QR89 54 aa4.56□□□□□ -1.68
SOX2-OT-218ENST00000498731 IGKV3-15P01624 115 aa4.56□□□□□ -1.68
SOX2-OT-218ENST00000498731 CRIP2P52943 208 aaPredicted RBP4.56□□□□□ -1.68
SOX2-OT-218ENST00000498731 BSPH1Q075Z2 132 aa4.56□□□□□ -1.68
SOX2-OT-218ENST00000498731 TEX29Q8N6K0 151 aa4.56□□□□□ -1.68
SOX2-OT-218ENST00000498731 NBPF19A0A087WUL8 3843 aa4.56□□□□□ -1.68
SOX2-OT-218ENST00000498731 ANKHD1Q8IWZ3 2542 aaKnown RBP4.56□□□□□ -1.68
SOX2-OT-218ENST00000498731 A0A0A0MQY5 61 aa4.56□□□□□ -1.68
SOX2-OT-218ENST00000498731 LYNX1G3V0Z9 82 aa4.56□□□□□ -1.68
SOX2-OT-218ENST00000498731 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.56□□□□□ -1.68
SOX2-OT-218ENST00000498731 J3QLI3 93 aa4.56□□□□□ -1.68
SOX2-OT-218ENST00000498731 LYNX1P0DP58 116 aa4.56□□□□□ -1.68
SOX2-OT-218ENST00000498731 GNLYP22749 145 aa4.56□□□□□ -1.68
SOX2-OT-218ENST00000498731 KLF17Q5JT82 389 aaPredicted RBP4.56□□□□□ -1.68
SOX2-OT-218ENST00000498731 IGFL3Q6UXB1 125 aa4.56□□□□□ -1.68
SOX2-OT-218ENST00000498731 Q8IYB0 196 aa4.56□□□□□ -1.68
SOX2-OT-218ENST00000498731 LY96Q9Y6Y9 160 aa4.56□□□□□ -1.68
SOX2-OT-218ENST00000498731 COL27A1Q8IZC6 1860 aaPredicted RBP4.55□□□□□ -1.68
SOX2-OT-218ENST00000498731 OOSP1A8MZH6 123 aa4.55□□□□□ -1.68
SOX2-OT-218ENST00000498731 RHODO00212 210 aa4.55□□□□□ -1.68
SOX2-OT-218ENST00000498731 SPINT2O43291 252 aa4.55□□□□□ -1.68
SOX2-OT-218ENST00000498731 CT45A10P0DMU9 189 aa4.55□□□□□ -1.68
SOX2-OT-218ENST00000498731 DUTP33316 252 aaKnown RBP4.55□□□□□ -1.68
SOX2-OT-218ENST00000498731 DUX4L9Q6RFH8 374 aaPredicted RBP4.55□□□□□ -1.68
SOX2-OT-218ENST00000498731 CEND1Q8N111 149 aa4.55□□□□□ -1.68
SOX2-OT-218ENST00000498731 OR13A1Q8NGR1 328 aa4.55□□□□□ -1.68
SOX2-OT-218ENST00000498731 CHCHD1Q96BP2 118 aaKnown RBP4.55□□□□□ -1.68
SOX2-OT-218ENST00000498731 LINC01587Q99440 93 aa4.55□□□□□ -1.68
SOX2-OT-218ENST00000498731 HHLA3Q9XRX5 114 aa4.55□□□□□ -1.68
SOX2-OT-218ENST00000498731 MALRD1Q5VYJ5 2156 aa4.55□□□□□ -1.68
SOX2-OT-218ENST00000498731 TRAV8-1A0A0A6YYK1 113 aa4.55□□□□□ -1.68
SOX2-OT-218ENST00000498731 C12orf77C9JDV5 145 aa4.55□□□□□ -1.68
SOX2-OT-218ENST00000498731 FCER1GP30273 86 aa4.55□□□□□ -1.68
SOX2-OT-218ENST00000498731 HBBP68871 147 aa4.55□□□□□ -1.68
SOX2-OT-218ENST00000498731 RUSC1-AS1Q66K80 236 aa4.55□□□□□ -1.68
SOX2-OT-218ENST00000498731 LINC01561Q8N1V8 128 aa4.55□□□□□ -1.68
SOX2-OT-218ENST00000498731 FAM216BQ8N7L0 139 aa4.55□□□□□ -1.68
SOX2-OT-218ENST00000498731 ZNF502Q8TBZ5 544 aa4.55□□□□□ -1.68
SOX2-OT-218ENST00000498731 DLX4Q92988 240 aaPredicted RBP4.55□□□□□ -1.68
SOX2-OT-218ENST00000498731 CYSTM1Q9H1C7 97 aa4.55□□□□□ -1.68
SOX2-OT-218ENST00000498731 SIGLEC8Q9NYZ4 499 aa4.55□□□□□ -1.68
SOX2-OT-218ENST00000498731 PLA2G2DQ9UNK4 145 aa4.55□□□□□ -1.68
SOX2-OT-218ENST00000498731 PROP1O75360 226 aa4.55□□□□□ -1.68
SOX2-OT-218ENST00000498731 PLA2G2AP14555 144 aa4.55□□□□□ -1.68
SOX2-OT-218ENST00000498731 PSMB2P49721 201 aa4.55□□□□□ -1.68
SOX2-OT-218ENST00000498731 Q6P435 159 aa4.55□□□□□ -1.68
SOX2-OT-218ENST00000498731 C1orf229Q6ZS94 237 aaPredicted RBP4.55□□□□□ -1.68
SOX2-OT-218ENST00000498731 Q8N1Y9 231 aa4.55□□□□□ -1.68
SOX2-OT-218ENST00000498731 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.55□□□□□ -1.68
SOX2-OT-218ENST00000498731 F5H768 121 aa4.54□□□□□ -1.68
SOX2-OT-218ENST00000498731 LY6HO94772 140 aa4.54□□□□□ -1.68
SOX2-OT-218ENST00000498731 ARMS2P0C7Q2 107 aa4.54□□□□□ -1.68
SOX2-OT-218ENST00000498731 SRD5A1P18405 259 aa4.54□□□□□ -1.68
SOX2-OT-218ENST00000498731 OR4X2Q8NGF9 303 aa4.54□□□□□ -1.68
SOX2-OT-218ENST00000498731 TIMD4Q96H15 378 aa4.54□□□□□ -1.68
SOX2-OT-218ENST00000498731 SONP18583 2426 aaKnown RBP4.54□□□□□ -1.68
SOX2-OT-218ENST00000498731 hADV38S2A0JD32 116 aa4.54□□□□□ -1.68
SOX2-OT-218ENST00000498731 SRRM4A7MD48 611 aaKnown RBP4.54□□□□□ -1.68
SOX2-OT-218ENST00000498731 RRN3P1Q2M238 152 aa4.54□□□□□ -1.68
SOX2-OT-218ENST00000498731 H2BFWTQ7Z2G1 175 aa4.54□□□□□ -1.68
SOX2-OT-218ENST00000498731 FAM19A5Q7Z5A7 132 aaPredicted RBP4.54□□□□□ -1.68
SOX2-OT-218ENST00000498731 CD177Q8N6Q3 437 aa4.54□□□□□ -1.68
SOX2-OT-218ENST00000498731 TMEM133Q9H2Q1 129 aa4.54□□□□□ -1.68
SOX2-OT-218ENST00000498731 RNF7Q9UBF6 113 aa4.54□□□□□ -1.68
SOX2-OT-218ENST00000498731 U3KQE9 123 aa4.54□□□□□ -1.68
SOX2-OT-218ENST00000498731 NIPBLQ6KC79 2804 aaeCLIP4.54□□□□□ -1.68
SOX2-OT-218ENST00000498731 SMIM9A6NGZ8 99 aa4.54□□□□□ -1.68
SOX2-OT-218ENST00000498731 KLRB1Q12918 225 aa4.54□□□□□ -1.68
SOX2-OT-218ENST00000498731 CEMP1Q6PRD7 247 aaPredicted RBP4.54□□□□□ -1.68
SOX2-OT-218ENST00000498731 ANKRD29Q8N6D5 301 aa4.54□□□□□ -1.68
SOX2-OT-218ENST00000498731 OR9G1Q8NH87 305 aa4.54□□□□□ -1.68
SOX2-OT-218ENST00000498731 EDA2RQ9HAV5 297 aa4.54□□□□□ -1.68
SOX2-OT-218ENST00000498731 C21orf62Q9NYP8 219 aa4.54□□□□□ -1.68
SOX2-OT-218ENST00000498731 F8P00451 2351 aa4.53□□□□□ -1.68
SOX2-OT-218ENST00000498731 H3BVH4 76 aa4.53□□□□□ -1.68
SOX2-OT-218ENST00000498731 IGHV1-46P01743 117 aa4.53□□□□□ -1.68
SOX2-OT-218ENST00000498731 DLX1P56177 255 aa4.53□□□□□ -1.68
SOX2-OT-218ENST00000498731 EIF4EBP1Q13541 118 aaPredicted RBP4.53□□□□□ -1.68
SOX2-OT-218ENST00000498731 MOB1BQ7L9L4 216 aa4.53□□□□□ -1.68
SOX2-OT-218ENST00000498731 C11orf53Q8IXP5 236 aa4.53□□□□□ -1.68
SOX2-OT-218ENST00000498731 CIARTQ8N365 385 aaPredicted RBP4.53□□□□□ -1.68
SOX2-OT-218ENST00000498731 NABP2Q9BQ15 211 aa4.53□□□□□ -1.68
SOX2-OT-218ENST00000498731 ZNRD1Q9P1U0 126 aa4.53□□□□□ -1.68
SOX2-OT-218ENST00000498731 C2CD3Q4AC94 2353 aa4.53□□□□□ -1.68
SOX2-OT-218ENST00000498731 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.53□□□□□ -1.68
SOX2-OT-218ENST00000498731 CENPVL3A0A0U1RRI6 287 aa4.53□□□□□ -1.68
SOX2-OT-218ENST00000498731 TEX50A0A1B0GTY4 177 aa4.53□□□□□ -1.68
SOX2-OT-218ENST00000498731 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.53□□□□□ -1.68
SOX2-OT-218ENST00000498731 MOSP00540 346 aa4.53□□□□□ -1.68
SOX2-OT-218ENST00000498731 RPL39P5Q59GN2 51 aa4.53□□□□□ -1.68
SOX2-OT-218ENST00000498731 FAM167A-AS1Q96KT0 104 aa4.53□□□□□ -1.68
SOX2-OT-218ENST00000498731 SLC25A2Q9BXI2 301 aa4.53□□□□□ -1.68
SOX2-OT-218ENST00000498731 NDUFS7O75251 213 aa4.53□□□□□ -1.68
SOX2-OT-218ENST00000498731 MPDU1O75352 247 aa4.53□□□□□ -1.68
SOX2-OT-218ENST00000498731 PAX8Q06710 450 aa4.53□□□□□ -1.68
SOX2-OT-218ENST00000498731 TTC32Q5I0X7 151 aa4.53□□□□□ -1.68
SOX2-OT-218ENST00000498731 FAM162BQ5T6X4 162 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms