RNA–Protein interactions for RNA: ENST00000498548.1

NR1H3-227, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-227ENST00000498548 ZNF680Q8NEM1 530 aa11.22□□□□□ -0.61
NR1H3-227ENST00000498548 ZNRF2Q8NHG8 242 aa11.22□□□□□ -0.61
NR1H3-227ENST00000498548 TRGV2A0A075B6R0 118 aa11.21□□□□□ -0.61
NR1H3-227ENST00000498548 RBAKDNA6NC62 111 aa11.21□□□□□ -0.61
NR1H3-227ENST00000498548 CCL18P55774 89 aa11.21□□□□□ -0.61
NR1H3-227ENST00000498548 RXFP4Q8TDU9 374 aa11.21□□□□□ -0.61
NR1H3-227ENST00000498548 OTORQ9NRC9 128 aa11.21□□□□□ -0.61
NR1H3-227ENST00000498548 MRPL16Q9NX20 251 aaKnown RBP11.21□□□□□ -0.61
NR1H3-227ENST00000498548 SPINK4O60575 86 aa11.2□□□□□ -0.62
NR1H3-227ENST00000498548 IGHV3-53P01767 116 aa11.2□□□□□ -0.62
NR1H3-227ENST00000498548 C1QBP02746 253 aa11.2□□□□□ -0.62
NR1H3-227ENST00000498548 ATP6V0CP27449 155 aa11.2□□□□□ -0.62
NR1H3-227ENST00000498548 TCL1AP56279 114 aa11.2□□□□□ -0.62
NR1H3-227ENST00000498548 FAM3BP58499 235 aaPredicted RBP11.2□□□□□ -0.62
NR1H3-227ENST00000498548 GNG5P63218 68 aa11.2□□□□□ -0.62
NR1H3-227ENST00000498548 ZFP69Q49AA0 526 aa11.2□□□□□ -0.62
NR1H3-227ENST00000498548 SSX7Q7RTT5 188 aa11.2□□□□□ -0.62
NR1H3-227ENST00000498548 AQP10Q96PS8 301 aa11.2□□□□□ -0.62
NR1H3-227ENST00000498548 ARPC5LQ9BPX5 153 aa11.2□□□□□ -0.62
NR1H3-227ENST00000498548 CDC34P49427 236 aaPredicted RBP11.19□□□□□ -0.62
NR1H3-227ENST00000498548 ZNF266Q14584 549 aa11.19□□□□□ -0.62
NR1H3-227ENST00000498548 C1orf134Q5TEV5 83 aa11.19□□□□□ -0.62
NR1H3-227ENST00000498548 PQLC2Q6ZP29 291 aa11.19□□□□□ -0.62
NR1H3-227ENST00000498548 GOLT1AQ6ZVE7 132 aa11.19□□□□□ -0.62
NR1H3-227ENST00000498548 CMTM2Q8TAZ6 248 aa11.19□□□□□ -0.62
NR1H3-227ENST00000498548 VSIG2Q96IQ7 327 aa11.19□□□□□ -0.62
NR1H3-227ENST00000498548 SH3BGRL3Q9H299 93 aa11.19□□□□□ -0.62
NR1H3-227ENST00000498548 TRBV7-9A0A0J9YWB2 115 aa11.18□□□□□ -0.62
NR1H3-227ENST00000498548 GIPP09681 153 aaPredicted RBP11.18□□□□□ -0.62
NR1H3-227ENST00000498548 ARL14EPLP0DKL9 152 aa11.18□□□□□ -0.62
NR1H3-227ENST00000498548 ESRGQ1W209 222 aa11.18□□□□□ -0.62
NR1H3-227ENST00000498548 IBA57Q5T440 356 aaKnown RBP11.18□□□□□ -0.62
NR1H3-227ENST00000498548 SGK494Q96LW2 274 aa11.18□□□□□ -0.62
NR1H3-227ENST00000498548 MDFICQ9P1T7 246 aa11.18□□□□□ -0.62
NR1H3-227ENST00000498548 DYNC1H1Q14204 4646 aaKnown RBP11.18□□□□□ -0.62
NR1H3-227ENST00000498548 FXYD6-FXYD2A0A087WZ82 144 aa11.17□□□□□ -0.62
NR1H3-227ENST00000498548 TRAV8-1A0A0A6YYK1 113 aa11.17□□□□□ -0.62
NR1H3-227ENST00000498548 NBDYA0A0U1RRE5 68 aa11.17□□□□□ -0.62
NR1H3-227ENST00000498548 NKX2-5P52952 324 aaPredicted RBP11.17□□□□□ -0.62
NR1H3-227ENST00000498548 FAM74A1Q5RGS3 127 aa11.17□□□□□ -0.62
NR1H3-227ENST00000498548 OR2G3Q8NGZ4 309 aa11.17□□□□□ -0.62
NR1H3-227ENST00000498548 RAB24Q969Q5 203 aa11.17□□□□□ -0.62
NR1H3-227ENST00000498548 TVP23CQ96ET8 276 aa11.17□□□□□ -0.62
NR1H3-227ENST00000498548 NAGKQ9UJ70 344 aa11.17□□□□□ -0.62
NR1H3-227ENST00000498548 PKD1P98161 4303 aa11.17□□□□□ -0.62
NR1H3-227ENST00000498548 MUC4Q99102 2169 aa11.16□□□□□ -0.62
NR1H3-227ENST00000498548 F6UZH7 168 aa11.16□□□□□ -0.62
NR1H3-227ENST00000498548 STAG3L2P0CL84 134 aa11.16□□□□□ -0.62
NR1H3-227ENST00000498548 STAG3L3P0CL85 134 aa11.16□□□□□ -0.62
NR1H3-227ENST00000498548 ZNF415Q09FC8 603 aa11.16□□□□□ -0.62
NR1H3-227ENST00000498548 TMEM183BQ1AE95 376 aa11.16□□□□□ -0.62
NR1H3-227ENST00000498548 Q6AWC8 147 aa11.16□□□□□ -0.62
NR1H3-227ENST00000498548 RPL7L1Q6DKI1 246 aaKnown RBP11.16□□□□□ -0.62
NR1H3-227ENST00000498548 TMEM183AQ8IXX5 376 aa11.16□□□□□ -0.62
NR1H3-227ENST00000498548 PSMG3Q9BT73 122 aaPredicted RBP11.16□□□□□ -0.62
NR1H3-227ENST00000498548 Q9H8V8 135 aa11.16□□□□□ -0.62
NR1H3-227ENST00000498548 A0A096LPF7 62 aa11.15□□□□□ -0.62
NR1H3-227ENST00000498548 RNF222A6NCQ9 220 aa11.15□□□□□ -0.62
NR1H3-227ENST00000498548 GNRH2O43555 120 aa11.15□□□□□ -0.62
NR1H3-227ENST00000498548 GCHFRP30047 84 aa11.15□□□□□ -0.62
NR1H3-227ENST00000498548 SOHLH1Q5JUK2 328 aa11.15□□□□□ -0.62
NR1H3-227ENST00000498548 FAM159AQ6UWV7 190 aa11.15□□□□□ -0.62
NR1H3-227ENST00000498548 INO80EQ8NBZ0 244 aaPredicted RBP11.15□□□□□ -0.62
NR1H3-227ENST00000498548 C18orf15Q96N68 181 aa11.15□□□□□ -0.62
NR1H3-227ENST00000498548 LENEPQ9Y5L5 61 aa11.15□□□□□ -0.62
NR1H3-227ENST00000498548 H3BNG1 76 aa11.14□□□□□ -0.63
NR1H3-227ENST00000498548 OR2T35Q8NGX2 323 aa11.14□□□□□ -0.63
NR1H3-227ENST00000498548 TMED6Q8WW62 240 aa11.14□□□□□ -0.63
NR1H3-227ENST00000498548 TREM1Q9NP99 234 aa11.14□□□□□ -0.63
NR1H3-227ENST00000498548 TNFSF18Q9UNG2 199 aa11.14□□□□□ -0.63
NR1H3-227ENST00000498548 PAX4O43316 350 aa11.13□□□□□ -0.63
NR1H3-227ENST00000498548 SFTA3P0C7M3 94 aa11.13□□□□□ -0.63
NR1H3-227ENST00000498548 SERF2P84101 59 aa11.13□□□□□ -0.63
NR1H3-227ENST00000498548 IFITM2Q01629 132 aa11.13□□□□□ -0.63
NR1H3-227ENST00000498548 TNP2Q05952 138 aa11.13□□□□□ -0.63
NR1H3-227ENST00000498548 FHL2Q14192 279 aa11.13□□□□□ -0.63
NR1H3-227ENST00000498548 C6orf223Q8N319 242 aa11.13□□□□□ -0.63
NR1H3-227ENST00000498548 ASB13Q8WXK3 278 aa11.13□□□□□ -0.63
NR1H3-227ENST00000498548 C8orf49Q96NF6 230 aa11.13□□□□□ -0.63
NR1H3-227ENST00000498548 ACTR3CQ9C0K3 210 aaPredicted RBP11.13□□□□□ -0.63
NR1H3-227ENST00000498548 PKHD1P08F94 4074 aa11.13□□□□□ -0.63
NR1H3-227ENST00000498548 DNAH11Q96DT5 4516 aa11.12□□□□□ -0.63
NR1H3-227ENST00000498548 G3V3Q6 166 aa11.12□□□□□ -0.63
NR1H3-227ENST00000498548 MBP02144 154 aa11.12□□□□□ -0.63
NR1H3-227ENST00000498548 SUMO1P63165 101 aaKnown RBP11.12□□□□□ -0.63
NR1H3-227ENST00000498548 IQCF2Q8IXL9 164 aa11.12□□□□□ -0.63
NR1H3-227ENST00000498548 SUN5Q8TC36 379 aa11.12□□□□□ -0.63
NR1H3-227ENST00000498548 HERC2O95714 4834 aa11.12□□□□□ -0.63
NR1H3-227ENST00000498548 TRGV11A0A075B6L2 103 aa11.11□□□□□ -0.63
NR1H3-227ENST00000498548 BORCS7-ASMTA0A0B4J1R7 106 aa11.11□□□□□ -0.63
NR1H3-227ENST00000498548 TRAV21A0A0B4J279 112 aa11.11□□□□□ -0.63
NR1H3-227ENST00000498548 SMLR1H3BR10 107 aa11.11□□□□□ -0.63
NR1H3-227ENST00000498548 CRYBA4P53673 196 aa11.11□□□□□ -0.63
NR1H3-227ENST00000498548 ZNF726P1Q15940 193 aa11.11□□□□□ -0.63
NR1H3-227ENST00000498548 ARL6IP6Q8N6S5 226 aa11.11□□□□□ -0.63
NR1H3-227ENST00000498548 OR11H4Q8NGC9 324 aa11.11□□□□□ -0.63
NR1H3-227ENST00000498548 ZNF479Q96JC4 524 aa11.11□□□□□ -0.63
NR1H3-227ENST00000498548 KRTAP1-5Q9BYS1 174 aa11.11□□□□□ -0.63
NR1H3-227ENST00000498548 HHLA3Q9XRX5 114 aa11.11□□□□□ -0.63
NR1H3-227ENST00000498548 MRPS16Q9Y3D3 137 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms