RNA–Protein interactions for RNA: ENST00000498090.1

AFF3-215, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 2

Gene AFF3, Length 1,673 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-215ENST00000498090 ASCL2Q99929 193 aa9.61□□□□□ -0.87
AFF3-215ENST00000498090 SMAD5-AS1Q9Y6J3 95 aa9.61□□□□□ -0.87
AFF3-215ENST00000498090 IGHV1-69DA0A0B4J2H0 117 aa9.6□□□□□ -0.87
AFF3-215ENST00000498090 J3QLI3 93 aa9.6□□□□□ -0.87
AFF3-215ENST00000498090 NPFFO15130 113 aa9.6□□□□□ -0.87
AFF3-215ENST00000498090 BUB3O43684 328 aa9.6□□□□□ -0.87
AFF3-215ENST00000498090 IGHV1-69P01742 117 aa9.6□□□□□ -0.87
AFF3-215ENST00000498090 SAA4P35542 130 aa9.6□□□□□ -0.87
AFF3-215ENST00000498090 ZNF138P52744 262 aa9.6□□□□□ -0.87
AFF3-215ENST00000498090 HIST1H1AQ02539 215 aaPredicted RBP9.6□□□□□ -0.87
AFF3-215ENST00000498090 LGALS9BQ3B8N2 356 aa9.6□□□□□ -0.87
AFF3-215ENST00000498090 FBLN7Q53RD9 439 aa9.6□□□□□ -0.87
AFF3-215ENST00000498090 LGALS9CQ6DKI2 356 aa9.6□□□□□ -0.87
AFF3-215ENST00000498090 Q71RC1 249 aaPredicted RBP9.6□□□□□ -0.87
AFF3-215ENST00000498090 BCL6BQ8N143 479 aaPredicted RBP9.6□□□□□ -0.87
AFF3-215ENST00000498090 OR1N2Q8NGR9 330 aa9.6□□□□□ -0.87
AFF3-215ENST00000498090 ZFAND3Q9H8U3 227 aa9.6□□□□□ -0.87
AFF3-215ENST00000498090 FLNAP21333 2647 aaKnown RBP9.6□□□□□ -0.87
AFF3-215ENST00000498090 SVEP1Q4LDE5 3571 aa9.6□□□□□ -0.87
AFF3-215ENST00000498090 ZANQ9Y493 2812 aa9.6□□□□□ -0.87
AFF3-215ENST00000498090 hDV102S1A0JD36 115 aa9.59□□□□□ -0.87
AFF3-215ENST00000498090 HBDP02042 147 aa9.59□□□□□ -0.87
AFF3-215ENST00000498090 RHOGP84095 191 aa9.59□□□□□ -0.87
AFF3-215ENST00000498090 BRD3OSQ6XYD6 125 aa9.59□□□□□ -0.87
AFF3-215ENST00000498090 SIGLEC8Q9NYZ4 499 aa9.59□□□□□ -0.87
AFF3-215ENST00000498090 ACANP16112 2415 aa9.59□□□□□ -0.87
AFF3-215ENST00000498090 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.58□□□□□ -0.88
AFF3-215ENST00000498090 TMEM213A2RRL7 107 aa9.58□□□□□ -0.88
AFF3-215ENST00000498090 LINC01546A6NGU7 62 aa9.58□□□□□ -0.88
AFF3-215ENST00000498090 FSHBP01225 129 aa9.58□□□□□ -0.88
AFF3-215ENST00000498090 IGHV3-23P01764 117 aa9.58□□□□□ -0.88
AFF3-215ENST00000498090 IGHG4P01861 327 aa9.58□□□□□ -0.88
AFF3-215ENST00000498090 COX8AP10176 69 aa9.58□□□□□ -0.88
AFF3-215ENST00000498090 GPR183P32249 361 aa9.58□□□□□ -0.88
AFF3-215ENST00000498090 CKS2P33552 79 aa9.58□□□□□ -0.88
AFF3-215ENST00000498090 IFI27P40305 119 aaPredicted RBP9.58□□□□□ -0.88
AFF3-215ENST00000498090 TWIST1Q15672 202 aa9.58□□□□□ -0.88
AFF3-215ENST00000498090 MRPL51Q4U2R6 128 aaKnown RBP9.58□□□□□ -0.88
AFF3-215ENST00000498090 AMN1Q8IY45 258 aa9.58□□□□□ -0.88
AFF3-215ENST00000498090 ATP6V0E1O15342 81 aa9.58□□□□□ -0.88
AFF3-215ENST00000498090 CLEC3BP05452 202 aa9.58□□□□□ -0.88
AFF3-215ENST00000498090 UBE2V1Q13404 147 aa9.58□□□□□ -0.88
AFF3-215ENST00000498090 PRR31Q5SQ13 230 aa9.58□□□□□ -0.88
AFF3-215ENST00000498090 METTL26Q96S19 204 aa9.58□□□□□ -0.88
AFF3-215ENST00000498090 VGLL1Q99990 258 aa9.58□□□□□ -0.88
AFF3-215ENST00000498090 MTORP42345 2549 aa9.57□□□□□ -0.88
AFF3-215ENST00000498090 TMSB15BA0A087X1C1 80 aa9.57□□□□□ -0.88
AFF3-215ENST00000498090 TCF21O43680 179 aa9.57□□□□□ -0.88
AFF3-215ENST00000498090 CRIP2P52943 208 aaPredicted RBP9.57□□□□□ -0.88
AFF3-215ENST00000498090 ECSCRQ19T08 205 aa9.57□□□□□ -0.88
AFF3-215ENST00000498090 FAM223BA6NKX1 122 aa9.56□□□□□ -0.88
AFF3-215ENST00000498090 CD5LO43866 347 aa9.56□□□□□ -0.88
AFF3-215ENST00000498090 ORM1P02763 201 aa9.56□□□□□ -0.88
AFF3-215ENST00000498090 PTTG1IPP53801 180 aa9.56□□□□□ -0.88
AFF3-215ENST00000498090 BVES-AS1Q5T3Y7 98 aa9.56□□□□□ -0.88
AFF3-215ENST00000498090 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.56□□□□□ -0.88
AFF3-215ENST00000498090 FAM223AQ8IWN6 122 aa9.56□□□□□ -0.88
AFF3-215ENST00000498090 DEFB125Q8N687 156 aa9.56□□□□□ -0.88
AFF3-215ENST00000498090 MAP1LC3AQ9H492 121 aa9.56□□□□□ -0.88
AFF3-215ENST00000498090 NXT2Q9NPJ8 142 aaKnown RBP9.56□□□□□ -0.88
AFF3-215ENST00000498090 WNK2Q9Y3S1 2297 aa9.56□□□□□ -0.88
AFF3-215ENST00000498090 ANK3Q12955 4377 aaKnown RBP9.56□□□□□ -0.88
AFF3-215ENST00000498090 A0A096LNJ9 63 aa9.55□□□□□ -0.88
AFF3-215ENST00000498090 NUDT3O95989 172 aa9.55□□□□□ -0.88
AFF3-215ENST00000498090 ZNF80P51504 273 aaPredicted RBP9.55□□□□□ -0.88
AFF3-215ENST00000498090 MPV17L2Q567V2 206 aa9.55□□□□□ -0.88
AFF3-215ENST00000498090 Q8TAT8 98 aa9.55□□□□□ -0.88
AFF3-215ENST00000498090 LENEPQ9Y5L5 61 aa9.55□□□□□ -0.88
AFF3-215ENST00000498090 H0Y8G0 127 aa9.55□□□□□ -0.88
AFF3-215ENST00000498090 SIVA1O15304 175 aa9.55□□□□□ -0.88
AFF3-215ENST00000498090 BRI3O95415 125 aa9.55□□□□□ -0.88
AFF3-215ENST00000498090 ATP5G2Q06055 141 aa9.55□□□□□ -0.88
AFF3-215ENST00000498090 TMEM78Q5T7P6 136 aa9.55□□□□□ -0.88
AFF3-215ENST00000498090 SMIM15Q7Z3B0 74 aa9.55□□□□□ -0.88
AFF3-215ENST00000498090 C5orf56Q8N8D9 126 aa9.55□□□□□ -0.88
AFF3-215ENST00000498090 CCDC140Q96MF4 163 aa9.55□□□□□ -0.88
AFF3-215ENST00000498090 SMR3AQ99954 134 aa9.55□□□□□ -0.88
AFF3-215ENST00000498090 MOB4Q9Y3A3 225 aa9.55□□□□□ -0.88
AFF3-215ENST00000498090 U3KQE9 123 aa9.55□□□□□ -0.88
AFF3-215ENST00000498090 PLXNB1O43157 2135 aa9.54□□□□□ -0.88
AFF3-215ENST00000498090 LOC389332A0A1B0GUA5 103 aa9.54□□□□□ -0.88
AFF3-215ENST00000498090 CLPSL1A2RUU4 121 aa9.54□□□□□ -0.88
AFF3-215ENST00000498090 SEC11AP67812 179 aa9.54□□□□□ -0.88
AFF3-215ENST00000498090 CLEC19AQ6UXS0 136 aa9.54□□□□□ -0.88
AFF3-215ENST00000498090 IL17RELQ6ZVW7 336 aa9.54□□□□□ -0.88
AFF3-215ENST00000498090 OR9G4Q8NGQ1 327 aa9.54□□□□□ -0.88
AFF3-215ENST00000498090 PIFOQ8TCI5 191 aa9.54□□□□□ -0.88
AFF3-215ENST00000498090 IFI27L1Q96BM0 104 aa9.54□□□□□ -0.88
AFF3-215ENST00000498090 NF1P21359 2839 aa9.53□□□□□ -0.88
AFF3-215ENST00000498090 NPYP01303 97 aa9.53□□□□□ -0.88
AFF3-215ENST00000498090 CACNG7P62955 275 aa9.53□□□□□ -0.88
AFF3-215ENST00000498090 C9orf47Q6ZRZ4 202 aa9.53□□□□□ -0.88
AFF3-215ENST00000498090 OR8A1Q8NGG7 326 aa9.53□□□□□ -0.88
AFF3-215ENST00000498090 RNF185Q96GF1 192 aa9.53□□□□□ -0.88
AFF3-215ENST00000498090 CBY1Q9Y3M2 126 aa9.53□□□□□ -0.88
AFF3-215ENST00000498090 TIMM8BQ9Y5J9 83 aaPredicted RBP9.53□□□□□ -0.88
AFF3-215ENST00000498090 PRSS47A8MTI9 375 aa9.52□□□□□ -0.89
AFF3-215ENST00000498090 H3BUA1 57 aa9.52□□□□□ -0.89
AFF3-215ENST00000498090 HLA-DMBP28068 263 aa9.52□□□□□ -0.89
AFF3-215ENST00000498090 C9orf139Q6ZV77 190 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms