RNA–Protein interactions for RNA: ENST00000497282.1

EFNA1-205, Transcript of ephrin A1, human

TSL 2

Gene EFNA1, Length 719 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EFNA1-205	ENST00000497282	LINC00479	Q96M42	142 aa		5.74	□□□□□ -1.49
EFNA1-205	ENST00000497282	C8orf49	Q96NF6	230 aa		5.74	□□□□□ -1.49
EFNA1-205	ENST00000497282	PYGO2	Q9BRQ0	406 aa		5.74	□□□□□ -1.49
EFNA1-205	ENST00000497282	NIPSNAP3B	Q9BS92	247 aa		5.74	□□□□□ -1.49
EFNA1-205	ENST00000497282	DKK2	Q9UBU2	259 aa		5.74	□□□□□ -1.49
EFNA1-205	ENST00000497282	ARL2-SNX15	V9GYD0	113 aa		5.74	□□□□□ -1.49
EFNA1-205	ENST00000497282	TRAV1-1	A0A0B4J248	108 aa		5.73	□□□□□ -1.49
EFNA1-205	ENST00000497282	PEX7	O00628	323 aa		5.73	□□□□□ -1.49
EFNA1-205	ENST00000497282	IFNA7	P01567	189 aa		5.73	□□□□□ -1.49
EFNA1-205	ENST00000497282	FLI1	Q01543	452 aa	Predicted RBP	5.73	□□□□□ -1.49
EFNA1-205	ENST00000497282	CST9LP1	Q5W188	147 aa		5.73	□□□□□ -1.49
EFNA1-205	ENST00000497282		Q6AWC8	147 aa		5.73	□□□□□ -1.49
EFNA1-205	ENST00000497282		Q86TA4	180 aa		5.73	□□□□□ -1.49
EFNA1-205	ENST00000497282	PHLDA1	Q8WV24	401 aa	Predicted RBP	5.73	□□□□□ -1.49
EFNA1-205	ENST00000497282	C16orf74	Q96GX8	76 aa		5.73	□□□□□ -1.49
EFNA1-205	ENST00000497282	LINC00467	Q9BRT7	94 aa		5.73	□□□□□ -1.49
EFNA1-205	ENST00000497282	TREM1	Q9NP99	234 aa		5.73	□□□□□ -1.49
EFNA1-205	ENST00000497282	TP53TG3	Q9ULZ0	132 aa		5.73	□□□□□ -1.49
EFNA1-205	ENST00000497282	PSG8	Q9UQ74	426 aa		5.73	□□□□□ -1.49
EFNA1-205	ENST00000497282	NBEAL2	Q6ZNJ1	2754 aa		5.73	□□□□□ -1.49
EFNA1-205	ENST00000497282	SCO2	A0A1W2PP80	73 aa		5.72	□□□□□ -1.49
EFNA1-205	ENST00000497282	NUPR2	A6NF83	97 aa		5.72	□□□□□ -1.49
EFNA1-205	ENST00000497282		K7EQM0	130 aa		5.72	□□□□□ -1.49
EFNA1-205	ENST00000497282	SPART-AS1	P0CW21	52 aa		5.72	□□□□□ -1.49
EFNA1-205	ENST00000497282	ZNF80	P51504	273 aa	Predicted RBP	5.72	□□□□□ -1.49
EFNA1-205	ENST00000497282	MUC21	Q5SSG8	566 aa		5.72	□□□□□ -1.49
EFNA1-205	ENST00000497282	CEMP1	Q6PRD7	247 aa	Predicted RBP	5.72	□□□□□ -1.49
EFNA1-205	ENST00000497282	PRNT	Q86SH4	94 aa		5.72	□□□□□ -1.49
EFNA1-205	ENST00000497282	EIF4E3	Q8N5X7	224 aa	Known RBP	5.72	□□□□□ -1.49
EFNA1-205	ENST00000497282	C11orf72	Q8NBR9	251 aa		5.72	□□□□□ -1.49
EFNA1-205	ENST00000497282	HIST1H2BA	Q96A08	127 aa		5.72	□□□□□ -1.49
EFNA1-205	ENST00000497282	NKX6-2	Q9C056	277 aa	Predicted RBP	5.72	□□□□□ -1.49
EFNA1-205	ENST00000497282	GNG13	Q9P2W3	67 aa		5.72	□□□□□ -1.49
EFNA1-205	ENST00000497282	IGHV1OR15-1	A0A075B7D0	117 aa		5.71	□□□□□ -1.5
EFNA1-205	ENST00000497282	CBY3	A6NI87	242 aa		5.71	□□□□□ -1.5
EFNA1-205	ENST00000497282	LYRM9	A8MSI8	78 aa		5.71	□□□□□ -1.5
EFNA1-205	ENST00000497282	C11orf94	C9JXX5	98 aa		5.71	□□□□□ -1.5
EFNA1-205	ENST00000497282	RGS13	O14921	159 aa		5.71	□□□□□ -1.5
EFNA1-205	ENST00000497282	ANXA2R	Q3ZCQ2	193 aa		5.71	□□□□□ -1.5
EFNA1-205	ENST00000497282	ZNF493	Q6ZR52	646 aa		5.71	□□□□□ -1.5
EFNA1-205	ENST00000497282	C2CD4C	Q8TF44	421 aa		5.71	□□□□□ -1.5
EFNA1-205	ENST00000497282	TCEAL7	Q9BRU2	100 aa		5.71	□□□□□ -1.5
EFNA1-205	ENST00000497282	NDFIP1	Q9BT67	221 aa		5.71	□□□□□ -1.5
EFNA1-205	ENST00000497282	NOP10	Q9NPE3	64 aa	Known RBP	5.71	□□□□□ -1.5
EFNA1-205	ENST00000497282	MANBAL	Q9NQG1	85 aa		5.71	□□□□□ -1.5
EFNA1-205	ENST00000497282	GSN-AS1	Q9NRJ2	163 aa		5.71	□□□□□ -1.5
EFNA1-205	ENST00000497282	C11orf21	Q9P2W6	132 aa		5.71	□□□□□ -1.5
EFNA1-205	ENST00000497282	KLF12	Q9Y4X4	402 aa		5.71	□□□□□ -1.5
EFNA1-205	ENST00000497282	TRAV21	A0A0B4J279	112 aa		5.7	□□□□□ -1.5
EFNA1-205	ENST00000497282	TEX48	A0A1B0GUV7	120 aa		5.7	□□□□□ -1.5
EFNA1-205	ENST00000497282	FBLL1	A6NHQ2	334 aa	Known RBP	5.7	□□□□□ -1.5
EFNA1-205	ENST00000497282	GCG	P01275	180 aa		5.7	□□□□□ -1.5
EFNA1-205	ENST00000497282	AKR1C3	P42330	323 aa		5.7	□□□□□ -1.5
EFNA1-205	ENST00000497282	PPT1	P50897	306 aa		5.7	□□□□□ -1.5
EFNA1-205	ENST00000497282	TCL1A	P56279	114 aa		5.7	□□□□□ -1.5
EFNA1-205	ENST00000497282	DAD1	P61803	113 aa		5.7	□□□□□ -1.5
EFNA1-205	ENST00000497282	TMEM183B	Q1AE95	376 aa		5.7	□□□□□ -1.5
EFNA1-205	ENST00000497282	IBA57	Q5T440	356 aa	Known RBP	5.7	□□□□□ -1.5
EFNA1-205	ENST00000497282	LINC00612	Q8N6U2	182 aa		5.7	□□□□□ -1.5
EFNA1-205	ENST00000497282	ZNF680	Q8NEM1	530 aa		5.7	□□□□□ -1.5
EFNA1-205	ENST00000497282	C11orf52	Q96A22	123 aa		5.7	□□□□□ -1.5
EFNA1-205	ENST00000497282	FMC1	Q96HJ9	113 aa		5.7	□□□□□ -1.5
EFNA1-205	ENST00000497282	DERL1	Q9BUN8	251 aa		5.7	□□□□□ -1.5
EFNA1-205	ENST00000497282	NAGK	Q9UJ70	344 aa		5.7	□□□□□ -1.5
EFNA1-205	ENST00000497282	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	5.7	□□□□□ -1.5
EFNA1-205	ENST00000497282	DNAH7	Q8WXX0	4024 aa		5.69	□□□□□ -1.5
EFNA1-205	ENST00000497282	DEFB131B	A0A096LNP1	70 aa		5.69	□□□□□ -1.5
EFNA1-205	ENST00000497282	TRAV10	A0A0B4J240	114 aa		5.69	□□□□□ -1.5
EFNA1-205	ENST00000497282	TRBV6-1	A0A0K0K1D8	114 aa		5.69	□□□□□ -1.5
EFNA1-205	ENST00000497282	SNURFL	B1AK76	121 aa		5.69	□□□□□ -1.5
EFNA1-205	ENST00000497282	TEX46	H3BTG2	121 aa		5.69	□□□□□ -1.5
EFNA1-205	ENST00000497282	LTA	P01374	205 aa		5.69	□□□□□ -1.5
EFNA1-205	ENST00000497282	TYMS	P04818	313 aa		5.69	□□□□□ -1.5
EFNA1-205	ENST00000497282	PFN1	P07737	140 aa	Known RBP	5.69	□□□□□ -1.5
EFNA1-205	ENST00000497282	DEFB130B	P0DP73	79 aa		5.69	□□□□□ -1.5
EFNA1-205	ENST00000497282	DEFB130A	P0DP74	79 aa		5.69	□□□□□ -1.5
EFNA1-205	ENST00000497282	BCL2	P10415	239 aa		5.69	□□□□□ -1.5
EFNA1-205	ENST00000497282	UBE2G1	P62253	170 aa		5.69	□□□□□ -1.5
EFNA1-205	ENST00000497282	DAZ2	Q13117	558 aa	Known RBP	5.69	□□□□□ -1.5
EFNA1-205	ENST00000497282	TDRG1	Q3Y452	100 aa		5.69	□□□□□ -1.5
EFNA1-205	ENST00000497282	SMUG1	Q53HV7	270 aa		5.69	□□□□□ -1.5
EFNA1-205	ENST00000497282	SAPCD1	Q5SSQ6	148 aa		5.69	□□□□□ -1.5
EFNA1-205	ENST00000497282	FAM159A	Q6UWV7	190 aa		5.69	□□□□□ -1.5
EFNA1-205	ENST00000497282		Q6ZTI0	123 aa		5.69	□□□□□ -1.5
EFNA1-205	ENST00000497282	LYPD6B	Q8NI32	183 aa		5.69	□□□□□ -1.5
EFNA1-205	ENST00000497282	ZC2HC1A	Q96GY0	325 aa		5.69	□□□□□ -1.5
EFNA1-205	ENST00000497282	MDFIC	Q9P1T7	246 aa		5.69	□□□□□ -1.5
EFNA1-205	ENST00000497282	STARD9	Q9P2P6	4700 aa		5.69	□□□□□ -1.5
EFNA1-205	ENST00000497282	IGHV3-16	A0A0C4DH30	117 aa		5.68	□□□□□ -1.5
EFNA1-205	ENST00000497282	GAGE12B	A1L429	117 aa		5.68	□□□□□ -1.5
EFNA1-205	ENST00000497282	GNRH2	O43555	120 aa		5.68	□□□□□ -1.5
EFNA1-205	ENST00000497282	SPINK4	O60575	86 aa		5.68	□□□□□ -1.5
EFNA1-205	ENST00000497282	GAGE7	O76087	117 aa		5.68	□□□□□ -1.5
EFNA1-205	ENST00000497282	GAGE12F	P0CL80	117 aa		5.68	□□□□□ -1.5
EFNA1-205	ENST00000497282	GAGE12G	P0CL81	117 aa		5.68	□□□□□ -1.5
EFNA1-205	ENST00000497282	GAGE12I	P0CL82	117 aa		5.68	□□□□□ -1.5
EFNA1-205	ENST00000497282	HTN3	P15516	51 aa		5.68	□□□□□ -1.5
EFNA1-205	ENST00000497282	CRIP1	P50238	77 aa		5.68	□□□□□ -1.5
EFNA1-205	ENST00000497282	BLOC1S1	P78537	153 aa		5.68	□□□□□ -1.5
EFNA1-205	ENST00000497282	MEF2B	Q02080	365 aa	Predicted RBP	5.68	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 131.5 ms