RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 RGS21Q2M5E4 152 aa11.56□□□□□ -0.56
TRAPPC3-207ENST00000497251 Q6ZRN7 208 aaPredicted RBP11.56□□□□□ -0.56
TRAPPC3-207ENST00000497251 MIR17HGQ75NE6 70 aa11.56□□□□□ -0.56
TRAPPC3-207ENST00000497251 SMIM3Q9BZL3 60 aa11.56□□□□□ -0.56
TRAPPC3-207ENST00000497251 APOBP04114 4563 aaKnown RBP11.56□□□□□ -0.56
TRAPPC3-207ENST00000497251 DMBT1Q9UGM3 2413 aaPredicted RBP11.55□□□□□ -0.56
TRAPPC3-207ENST00000497251 NDUFB4O95168 129 aa11.55□□□□□ -0.56
TRAPPC3-207ENST00000497251 GIPP09681 153 aaPredicted RBP11.55□□□□□ -0.56
TRAPPC3-207ENST00000497251 PYYP10082 97 aa11.55□□□□□ -0.56
TRAPPC3-207ENST00000497251 PRB4P10163 310 aaPredicted RBP11.55□□□□□ -0.56
TRAPPC3-207ENST00000497251 ERVFC1-1P60608 527 aa11.55□□□□□ -0.56
TRAPPC3-207ENST00000497251 TMEM78Q5T7P6 136 aa11.55□□□□□ -0.56
TRAPPC3-207ENST00000497251 VGLL1Q99990 258 aa11.55□□□□□ -0.56
TRAPPC3-207ENST00000497251 AGPAT4-IT1Q9H0P7 198 aa11.55□□□□□ -0.56
TRAPPC3-207ENST00000497251 OR51M1Q9H341 326 aa11.55□□□□□ -0.56
TRAPPC3-207ENST00000497251 EPM2AB3EWF7 344 aa11.54□□□□□ -0.56
TRAPPC3-207ENST00000497251 M0R3E3 92 aa11.54□□□□□ -0.56
TRAPPC3-207ENST00000497251 RGS13O14921 159 aa11.54□□□□□ -0.56
TRAPPC3-207ENST00000497251 NBEAP1P0C6P0 100 aa11.54□□□□□ -0.56
TRAPPC3-207ENST00000497251 RNASE4P34096 147 aaKnown RBP11.54□□□□□ -0.56
TRAPPC3-207ENST00000497251 FFAR4Q5NUL3 377 aa11.54□□□□□ -0.56
TRAPPC3-207ENST00000497251 AQP10Q96PS8 301 aa11.54□□□□□ -0.56
TRAPPC3-207ENST00000497251 NXPH4O95158 308 aa11.53□□□□□ -0.56
TRAPPC3-207ENST00000497251 CD300CQ08708 224 aa11.53□□□□□ -0.56
TRAPPC3-207ENST00000497251 ZNF266Q14584 549 aa11.53□□□□□ -0.56
TRAPPC3-207ENST00000497251 NEGR1Q7Z3B1 354 aa11.53□□□□□ -0.56
TRAPPC3-207ENST00000497251 IQCF2Q8IXL9 164 aa11.53□□□□□ -0.56
TRAPPC3-207ENST00000497251 BLNKQ8WV28 456 aa11.53□□□□□ -0.56
TRAPPC3-207ENST00000497251 ARPC5LQ9BPX5 153 aa11.53□□□□□ -0.56
TRAPPC3-207ENST00000497251 PAXXQ9BUH6 204 aa11.53□□□□□ -0.56
TRAPPC3-207ENST00000497251 WFDC1Q9HC57 220 aa11.53□□□□□ -0.56
TRAPPC3-207ENST00000497251 HHLA3Q9XRX5 114 aa11.53□□□□□ -0.56
TRAPPC3-207ENST00000497251 KLF12Q9Y4X4 402 aa11.53□□□□□ -0.56
TRAPPC3-207ENST00000497251 IGHV1OR15-1A0A075B7D0 117 aa11.52□□□□□ -0.57
TRAPPC3-207ENST00000497251 TAS2R45P59539 299 aa11.52□□□□□ -0.57
TRAPPC3-207ENST00000497251 ERCC8Q13216 396 aa11.52□□□□□ -0.57
TRAPPC3-207ENST00000497251 KHDC3LQ587J8 217 aa11.52□□□□□ -0.57
TRAPPC3-207ENST00000497251 ZFAND2AQ8N6M9 145 aa11.52□□□□□ -0.57
TRAPPC3-207ENST00000497251 FXYD5Q96DB9 178 aa11.52□□□□□ -0.57
TRAPPC3-207ENST00000497251 ZNF492Q9P255 531 aa11.52□□□□□ -0.57
TRAPPC3-207ENST00000497251 BOLA1Q9Y3E2 137 aa11.52□□□□□ -0.57
TRAPPC3-207ENST00000497251 OR7C2O60412 319 aa11.51□□□□□ -0.57
TRAPPC3-207ENST00000497251 CRYBA4P53673 196 aa11.51□□□□□ -0.57
TRAPPC3-207ENST00000497251 BTN1A1Q13410 526 aa11.51□□□□□ -0.57
TRAPPC3-207ENST00000497251 LYPD5Q6UWN5 251 aa11.51□□□□□ -0.57
TRAPPC3-207ENST00000497251 LYPD1Q8N2G4 141 aa11.51□□□□□ -0.57
TRAPPC3-207ENST00000497251 EXOC3-AS1Q8N2X6 119 aa11.51□□□□□ -0.57
TRAPPC3-207ENST00000497251 RBAKDNA6NC62 111 aa11.5□□□□□ -0.57
TRAPPC3-207ENST00000497251 OR10J4P0C629 311 aa11.5□□□□□ -0.57
TRAPPC3-207ENST00000497251 ZNF415Q09FC8 603 aa11.5□□□□□ -0.57
TRAPPC3-207ENST00000497251 ICAM4Q14773 271 aa11.5□□□□□ -0.57
TRAPPC3-207ENST00000497251 ACOT6Q3I5F7 207 aaPredicted RBP11.5□□□□□ -0.57
TRAPPC3-207ENST00000497251 LY96Q9Y6Y9 160 aa11.5□□□□□ -0.57
TRAPPC3-207ENST00000497251 ORM1P02763 201 aa11.49□□□□□ -0.57
TRAPPC3-207ENST00000497251 CSN1S1P47710 185 aa11.49□□□□□ -0.57
TRAPPC3-207ENST00000497251 ZNF138P52744 262 aa11.49□□□□□ -0.57
TRAPPC3-207ENST00000497251 UBE2L3P68036 154 aaKnown RBP11.49□□□□□ -0.57
TRAPPC3-207ENST00000497251 FHL2Q14192 279 aa11.49□□□□□ -0.57
TRAPPC3-207ENST00000497251 SH2D6Q7Z4S9 175 aa11.49□□□□□ -0.57
TRAPPC3-207ENST00000497251 OR2G3Q8NGZ4 309 aa11.49□□□□□ -0.57
TRAPPC3-207ENST00000497251 SPXQ9BT56 116 aa11.49□□□□□ -0.57
TRAPPC3-207ENST00000497251 TP53TG3Q9ULZ0 132 aa11.49□□□□□ -0.57
TRAPPC3-207ENST00000497251 LENEPQ9Y5L5 61 aa11.49□□□□□ -0.57
TRAPPC3-207ENST00000497251 EVI2AP22794 236 aa11.48□□□□□ -0.57
TRAPPC3-207ENST00000497251 Q5BKY6 102 aa11.48□□□□□ -0.57
TRAPPC3-207ENST00000497251 PQLC2Q6ZP29 291 aa11.48□□□□□ -0.57
TRAPPC3-207ENST00000497251 C10orf126Q8N4M7 172 aa11.48□□□□□ -0.57
TRAPPC3-207ENST00000497251 INO80EQ8NBZ0 244 aaPredicted RBP11.48□□□□□ -0.57
TRAPPC3-207ENST00000497251 RASL10AQ92737 203 aa11.48□□□□□ -0.57
TRAPPC3-207ENST00000497251 PHYHIPLQ96FC7 376 aa11.48□□□□□ -0.57
TRAPPC3-207ENST00000497251 PSMG3Q9BT73 122 aaPredicted RBP11.48□□□□□ -0.57
TRAPPC3-207ENST00000497251 TRGV4A0A0C4DH28 118 aa11.47□□□□□ -0.57
TRAPPC3-207ENST00000497251 A0A1W2PPV4 95 aa11.47□□□□□ -0.57
TRAPPC3-207ENST00000497251 SRIP30626 198 aa11.47□□□□□ -0.57
TRAPPC3-207ENST00000497251 FAM122CQ6P4D5 195 aa11.47□□□□□ -0.57
TRAPPC3-207ENST00000497251 OR10G4Q8NGN3 311 aa11.47□□□□□ -0.57
TRAPPC3-207ENST00000497251 OR2T35Q8NGX2 323 aa11.47□□□□□ -0.57
TRAPPC3-207ENST00000497251 PCNPQ8WW12 178 aaKnown RBP11.47□□□□□ -0.57
TRAPPC3-207ENST00000497251 TXNDC17Q9BRA2 123 aa11.47□□□□□ -0.57
TRAPPC3-207ENST00000497251 A0A087WTM6 91 aa11.46□□□□□ -0.57
TRAPPC3-207ENST00000497251 IGKV2-40A0A087WW87 121 aaPredicted RBP11.46□□□□□ -0.57
TRAPPC3-207ENST00000497251 IGKV2D-40P01614 121 aaPredicted RBP11.46□□□□□ -0.57
TRAPPC3-207ENST00000497251 RAB2AP61019 212 aa11.46□□□□□ -0.57
TRAPPC3-207ENST00000497251 SERF2P84101 59 aa11.46□□□□□ -0.57
TRAPPC3-207ENST00000497251 TMED6Q8WW62 240 aa11.46□□□□□ -0.57
TRAPPC3-207ENST00000497251 FRZBQ92765 325 aa11.46□□□□□ -0.57
TRAPPC3-207ENST00000497251 C8orf49Q96NF6 230 aa11.46□□□□□ -0.57
TRAPPC3-207ENST00000497251 MRPL16Q9NX20 251 aaKnown RBP11.46□□□□□ -0.57
TRAPPC3-207ENST00000497251 MSRB1Q9NZV6 116 aa11.46□□□□□ -0.57
TRAPPC3-207ENST00000497251 TNFSF18Q9UNG2 199 aa11.46□□□□□ -0.57
TRAPPC3-207ENST00000497251 TRGV11A0A075B6L2 103 aa11.45□□□□□ -0.58
TRAPPC3-207ENST00000497251 FXYD6-FXYD2A0A087WZ82 144 aa11.45□□□□□ -0.58
TRAPPC3-207ENST00000497251 RNF222A6NCQ9 220 aa11.45□□□□□ -0.58
TRAPPC3-207ENST00000497251 IGHV3-53P01767 116 aa11.45□□□□□ -0.58
TRAPPC3-207ENST00000497251 MBP02144 154 aa11.45□□□□□ -0.58
TRAPPC3-207ENST00000497251 DNAH10OSP0CZ25 163 aa11.45□□□□□ -0.58
TRAPPC3-207ENST00000497251 INAFM2P0DMQ5 153 aa11.45□□□□□ -0.58
TRAPPC3-207ENST00000497251 RANP62826 216 aaKnown RBP11.45□□□□□ -0.58
TRAPPC3-207ENST00000497251 HSD17B11Q8NBQ5 300 aa11.45□□□□□ -0.58
TRAPPC3-207ENST00000497251 OR10G9Q8NGN4 311 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms