RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 LENEPQ9Y5L5 61 aa9.94□□□□□ -0.82
GARNL3-220ENST00000496711 ZFYVE26Q68DK2 2539 aa9.94□□□□□ -0.82
GARNL3-220ENST00000496711 UBR5O95071 2799 aaPredicted RBP9.94□□□□□ -0.82
GARNL3-220ENST00000496711 TRAV9-2A0A087WT02 112 aa9.93□□□□□ -0.82
GARNL3-220ENST00000496711 IGKV3D-20A0A0C4DH25 116 aa9.93□□□□□ -0.82
GARNL3-220ENST00000496711 UQCR10Q9UDW1 63 aa9.93□□□□□ -0.82
GARNL3-220ENST00000496711 ZFHX3Q15911 3703 aa9.93□□□□□ -0.82
GARNL3-220ENST00000496711 IGHV7-4-1A0A0J9YVY3 117 aa9.93□□□□□ -0.82
GARNL3-220ENST00000496711 OVOL1O14753 267 aa9.93□□□□□ -0.82
GARNL3-220ENST00000496711 IGLC3P0DOY3 106 aa9.93□□□□□ -0.82
GARNL3-220ENST00000496711 MAPK1IP1LQ8NDC0 245 aa9.93□□□□□ -0.82
GARNL3-220ENST00000496711 OR10AG1Q8NH19 301 aa9.93□□□□□ -0.82
GARNL3-220ENST00000496711 MAP1LC3CQ9BXW4 147 aa9.93□□□□□ -0.82
GARNL3-220ENST00000496711 DAZ1Q9NQZ3 744 aaKnown RBP9.93□□□□□ -0.82
GARNL3-220ENST00000496711 SIGLEC8Q9NYZ4 499 aa9.93□□□□□ -0.82
GARNL3-220ENST00000496711 C11orf21Q9P2W6 132 aa9.93□□□□□ -0.82
GARNL3-220ENST00000496711 FAM208BQ5VWN6 2430 aa9.92□□□□□ -0.82
GARNL3-220ENST00000496711 OR4C46A6NHA9 309 aa9.92□□□□□ -0.82
GARNL3-220ENST00000496711 RNF223E7ERA6 249 aa9.92□□□□□ -0.82
GARNL3-220ENST00000496711 PSMB8P28062 276 aa9.92□□□□□ -0.82
GARNL3-220ENST00000496711 CKS2P33552 79 aa9.92□□□□□ -0.82
GARNL3-220ENST00000496711 IFI27P40305 119 aaPredicted RBP9.92□□□□□ -0.82
GARNL3-220ENST00000496711 FOXE3Q13461 319 aa9.92□□□□□ -0.82
GARNL3-220ENST00000496711 MAJINQ3KP22 176 aa9.92□□□□□ -0.82
GARNL3-220ENST00000496711 PEF1Q9UBV8 284 aaKnown RBP9.92□□□□□ -0.82
GARNL3-220ENST00000496711 CSPG4Q6UVK1 2322 aa9.92□□□□□ -0.82
GARNL3-220ENST00000496711 CELSR2Q9HCU4 2923 aa9.91□□□□□ -0.82
GARNL3-220ENST00000496711 PET117Q6UWS5 81 aa9.91□□□□□ -0.82
GARNL3-220ENST00000496711 OR10J6PQ8NGY7 276 aa9.91□□□□□ -0.82
GARNL3-220ENST00000496711 RHPN1-AS1Q9BWJ2 59 aa9.91□□□□□ -0.82
GARNL3-220ENST00000496711 MSRB1Q9NZV6 116 aa9.91□□□□□ -0.82
GARNL3-220ENST00000496711 CRYBG3Q68DQ2 2970 aa9.91□□□□□ -0.82
GARNL3-220ENST00000496711 LOC389332A0A1B0GUA5 103 aa9.91□□□□□ -0.82
GARNL3-220ENST00000496711 TMEM89A2RUT3 159 aa9.91□□□□□ -0.82
GARNL3-220ENST00000496711 FSHBP01225 129 aa9.91□□□□□ -0.82
GARNL3-220ENST00000496711 NPYP01303 97 aa9.91□□□□□ -0.82
GARNL3-220ENST00000496711 RPL11P62913 178 aaKnown RBP9.91□□□□□ -0.82
GARNL3-220ENST00000496711 TM4SF20Q53R12 229 aa9.91□□□□□ -0.82
GARNL3-220ENST00000496711 RNF185Q96GF1 192 aa9.91□□□□□ -0.82
GARNL3-220ENST00000496711 LINC00477Q96M19 166 aa9.91□□□□□ -0.82
GARNL3-220ENST00000496711 BEX4Q9NWD9 120 aaPredicted RBP9.91□□□□□ -0.82
GARNL3-220ENST00000496711 LRRK2Q5S007 2527 aa9.9□□□□□ -0.82
GARNL3-220ENST00000496711 SMKR1H3BMG3 65 aa9.9□□□□□ -0.82
GARNL3-220ENST00000496711 K7EMT4 169 aa9.9□□□□□ -0.82
GARNL3-220ENST00000496711 NCR2O95944 276 aa9.9□□□□□ -0.82
GARNL3-220ENST00000496711 PPBPP02775 128 aa9.9□□□□□ -0.82
GARNL3-220ENST00000496711 IGHV4-31P0DP07 118 aa9.9□□□□□ -0.82
GARNL3-220ENST00000496711 PRR9Q5T870 116 aa9.9□□□□□ -0.82
GARNL3-220ENST00000496711 VPREB3Q9UKI3 123 aa9.9□□□□□ -0.82
GARNL3-220ENST00000496711 TIMM8BQ9Y5J9 83 aaPredicted RBP9.9□□□□□ -0.82
GARNL3-220ENST00000496711 KRTAP10-9P60411 292 aa9.89□□□□□ -0.83
GARNL3-220ENST00000496711 FAM106AQ4KMX7 169 aa9.89□□□□□ -0.83
GARNL3-220ENST00000496711 Q6ZN92 141 aa9.89□□□□□ -0.83
GARNL3-220ENST00000496711 ZMAT5Q9UDW3 170 aaKnown RBP9.89□□□□□ -0.83
GARNL3-220ENST00000496711 SMPXQ9UHP9 88 aa9.89□□□□□ -0.83
GARNL3-220ENST00000496711 A0A096LNJ9 63 aa9.89□□□□□ -0.83
GARNL3-220ENST00000496711 IGLL1P15814 213 aa9.89□□□□□ -0.83
GARNL3-220ENST00000496711 HNRNPA3P51991 378 aaKnown RBP9.89□□□□□ -0.83
GARNL3-220ENST00000496711 NUTF2P61970 127 aaKnown RBP9.89□□□□□ -0.83
GARNL3-220ENST00000496711 DEFB113Q30KQ7 82 aa9.89□□□□□ -0.83
GARNL3-220ENST00000496711 PRSS57Q6UWY2 283 aa9.89□□□□□ -0.83
GARNL3-220ENST00000496711 LRRC75A-AS1Q8N1F1 130 aa9.89□□□□□ -0.83
GARNL3-220ENST00000496711 ZFAND2AQ8N6M9 145 aa9.89□□□□□ -0.83
GARNL3-220ENST00000496711 ZNF747Q9BV97 191 aa9.89□□□□□ -0.83
GARNL3-220ENST00000496711 LAMTOR2Q9Y2Q5 125 aa9.89□□□□□ -0.83
GARNL3-220ENST00000496711 PRRC2AP48634 2157 aaKnown RBP9.89□□□□□ -0.83
GARNL3-220ENST00000496711 FBN2P35556 2912 aa9.88□□□□□ -0.83
GARNL3-220ENST00000496711 SNAI2O43623 268 aa9.88□□□□□ -0.83
GARNL3-220ENST00000496711 TCF21O43680 179 aa9.88□□□□□ -0.83
GARNL3-220ENST00000496711 Q5PR19 223 aa9.88□□□□□ -0.83
GARNL3-220ENST00000496711 LINC00469Q8N7U9 141 aa9.88□□□□□ -0.83
GARNL3-220ENST00000496711 MAP1LC3AQ9H492 121 aa9.88□□□□□ -0.83
GARNL3-220ENST00000496711 UFC1Q9Y3C8 167 aa9.88□□□□□ -0.83
GARNL3-220ENST00000496711 IGKV3-7A0A075B6H7 116 aa9.87□□□□□ -0.83
GARNL3-220ENST00000496711 H0Y8G0 127 aa9.87□□□□□ -0.83
GARNL3-220ENST00000496711 HBDP02042 147 aa9.87□□□□□ -0.83
GARNL3-220ENST00000496711 CACNG7P62955 275 aa9.87□□□□□ -0.83
GARNL3-220ENST00000496711 LINC01545Q5VT33 79 aa9.87□□□□□ -0.83
GARNL3-220ENST00000496711 SAMD13Q5VXD3 122 aa9.87□□□□□ -0.83
GARNL3-220ENST00000496711 C10orf99Q6UWK7 81 aa9.87□□□□□ -0.83
GARNL3-220ENST00000496711 Q6YL49 198 aa9.87□□□□□ -0.83
GARNL3-220ENST00000496711 Q6ZQT7 251 aa9.87□□□□□ -0.83
GARNL3-220ENST00000496711 OR8A1Q8NGG7 326 aa9.87□□□□□ -0.83
GARNL3-220ENST00000496711 IGHV4-4A0A075B6R2 117 aa9.87□□□□□ -0.83
GARNL3-220ENST00000496711 TRAV21A0A0B4J279 112 aa9.87□□□□□ -0.83
GARNL3-220ENST00000496711 J3KRW8 73 aa9.87□□□□□ -0.83
GARNL3-220ENST00000496711 DEFB1P60022 68 aa9.87□□□□□ -0.83
GARNL3-220ENST00000496711 SMIM15Q7Z3B0 74 aa9.87□□□□□ -0.83
GARNL3-220ENST00000496711 FAM19A4Q96LR4 140 aa9.87□□□□□ -0.83
GARNL3-220ENST00000496711 ST20Q9HBF5 79 aa9.87□□□□□ -0.83
GARNL3-220ENST00000496711 POLQO75417 2590 aa9.86□□□□□ -0.83
GARNL3-220ENST00000496711 MAP1AP78559 2803 aaPredicted RBP9.86□□□□□ -0.83
GARNL3-220ENST00000496711 TRBV7-9A0A0J9YWB2 115 aa9.86□□□□□ -0.83
GARNL3-220ENST00000496711 HSBP1L1C9JCN9 74 aa9.86□□□□□ -0.83
GARNL3-220ENST00000496711 H3BVH4 76 aa9.86□□□□□ -0.83
GARNL3-220ENST00000496711 EDN2P20800 178 aa9.86□□□□□ -0.83
GARNL3-220ENST00000496711 F6UB75 175 aa9.85□□□□□ -0.83
GARNL3-220ENST00000496711 TNFRSF6BO95407 300 aa9.85□□□□□ -0.83
GARNL3-220ENST00000496711 RPLP1P05386 114 aaKnown RBP9.85□□□□□ -0.83
GARNL3-220ENST00000496711 TSPOP30536 169 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms