RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 OR8A1Q8NGG7 326 aa2.91□□□□□ -1.94
SF3B1-212ENST00000496458 OR4C16Q8NGL9 310 aa2.91□□□□□ -1.94
SF3B1-212ENST00000496458 TRIB3Q96RU7 358 aa2.91□□□□□ -1.94
SF3B1-212ENST00000496458 PMCHL2Q9BQD1 86 aa2.91□□□□□ -1.94
SF3B1-212ENST00000496458 TMEM147Q9BVK8 224 aa2.91□□□□□ -1.94
SF3B1-212ENST00000496458 RPP21Q9H633 154 aaKnown RBP2.91□□□□□ -1.94
SF3B1-212ENST00000496458 SND1-IT1Q9HBX3 110 aa2.91□□□□□ -1.94
SF3B1-212ENST00000496458 ACER3Q9NUN7 267 aa2.91□□□□□ -1.94
SF3B1-212ENST00000496458 NOP16Q9Y3C1 178 aaKnown RBP2.91□□□□□ -1.94
SF3B1-212ENST00000496458 ANKRD36A6QL64 1941 aa2.91□□□□□ -1.94
SF3B1-212ENST00000496458 SEC16AO15027 2179 aa2.91□□□□□ -1.94
SF3B1-212ENST00000496458 KIAA1549LQ6ZVL6 1849 aa2.91□□□□□ -1.94
SF3B1-212ENST00000496458 CHD6Q8TD26 2715 aa2.91□□□□□ -1.94
SF3B1-212ENST00000496458 CACNA1GO43497 2377 aa2.9□□□□□ -1.94
SF3B1-212ENST00000496458 CHD3Q12873 2000 aaKnown RBP2.9□□□□□ -1.94
SF3B1-212ENST00000496458 SPTA1P02549 2419 aa2.9□□□□□ -1.94
SF3B1-212ENST00000496458 TRAV9-1A0A075B6T8 112 aa2.9□□□□□ -1.95
SF3B1-212ENST00000496458 TMED7-TICAM2A0A0A6YYA0 188 aa2.9□□□□□ -1.95
SF3B1-212ENST00000496458 TRAV1-1A0A0B4J248 108 aa2.9□□□□□ -1.95
SF3B1-212ENST00000496458 IGKV1-6A0A0C4DH72 117 aa2.9□□□□□ -1.95
SF3B1-212ENST00000496458 IGHV7-4-1A0A0J9YVY3 117 aa2.9□□□□□ -1.95
SF3B1-212ENST00000496458 SPAARA0A1B0GVQ0 90 aa2.9□□□□□ -1.95
SF3B1-212ENST00000496458 A0A1B0GVX0 72 aa2.9□□□□□ -1.95
SF3B1-212ENST00000496458 OR51F1A6NGY5 319 aa2.9□□□□□ -1.95
SF3B1-212ENST00000496458 C4orf51C9J302 202 aa2.9□□□□□ -1.95
SF3B1-212ENST00000496458 H7C1C5 153 aa2.9□□□□□ -1.95
SF3B1-212ENST00000496458 M0R2Z0 102 aa2.9□□□□□ -1.95
SF3B1-212ENST00000496458 DEDDO75618 318 aa2.9□□□□□ -1.95
SF3B1-212ENST00000496458 HRASP01112 189 aa2.9□□□□□ -1.95
SF3B1-212ENST00000496458 LTAP01374 205 aa2.9□□□□□ -1.95
SF3B1-212ENST00000496458 IGLV3-25P01717 112 aa2.9□□□□□ -1.95
SF3B1-212ENST00000496458 ZNF728P0DKX0 622 aa2.9□□□□□ -1.95
SF3B1-212ENST00000496458 CDK2P24941 298 aa2.9□□□□□ -1.95
SF3B1-212ENST00000496458 CA7P43166 264 aa2.9□□□□□ -1.95
SF3B1-212ENST00000496458 LINC00313P59037 77 aa2.9□□□□□ -1.95
SF3B1-212ENST00000496458 GNG5P63218 68 aa2.9□□□□□ -1.95
SF3B1-212ENST00000496458 Q0VG73 95 aa2.9□□□□□ -1.95
SF3B1-212ENST00000496458 KLRD1Q13241 179 aa2.9□□□□□ -1.95
SF3B1-212ENST00000496458 MSMO1Q15800 293 aa2.9□□□□□ -1.95
SF3B1-212ENST00000496458 MPV17LQ2QL34 196 aa2.9□□□□□ -1.95
SF3B1-212ENST00000496458 RPL7L1Q6DKI1 246 aaKnown RBP2.9□□□□□ -1.95
SF3B1-212ENST00000496458 KRTAP5-7Q6L8G8 165 aa2.9□□□□□ -1.95
SF3B1-212ENST00000496458 EBLN2Q6P2I7 272 aa2.9□□□□□ -1.95
SF3B1-212ENST00000496458 Q6Q795 121 aa2.9□□□□□ -1.95
SF3B1-212ENST00000496458 Q6ZS92 163 aa2.9□□□□□ -1.95
SF3B1-212ENST00000496458 TCF23Q7RTU1 214 aa2.9□□□□□ -1.95
SF3B1-212ENST00000496458 PDPNQ86YL7 162 aa2.9□□□□□ -1.95
SF3B1-212ENST00000496458 ORMDL3Q8N138 153 aa2.9□□□□□ -1.95
SF3B1-212ENST00000496458 KRTCAP2Q8N6L1 136 aa2.9□□□□□ -1.95
SF3B1-212ENST00000496458 C15orf56Q8N910 161 aa2.9□□□□□ -1.95
SF3B1-212ENST00000496458 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.9□□□□□ -1.95
SF3B1-212ENST00000496458 OR10P1Q8NGE3 313 aa2.9□□□□□ -1.95
SF3B1-212ENST00000496458 OR2T10Q8NGZ9 312 aa2.9□□□□□ -1.95
SF3B1-212ENST00000496458 VSTM2AQ8TAG5 236 aa2.9□□□□□ -1.95
SF3B1-212ENST00000496458 WFDC5Q8TCV5 224 aa2.9□□□□□ -1.95
SF3B1-212ENST00000496458 AP1S3Q96PC3 154 aa2.9□□□□□ -1.95
SF3B1-212ENST00000496458 DERL3Q96Q80 235 aa2.9□□□□□ -1.95
SF3B1-212ENST00000496458 SPANXDQ9BXN6 97 aa2.9□□□□□ -1.95
SF3B1-212ENST00000496458 RERGLQ9H628 205 aa2.9□□□□□ -1.95
SF3B1-212ENST00000496458 ZNF492Q9P255 531 aa2.9□□□□□ -1.95
SF3B1-212ENST00000496458 OR5V1Q9UGF6 321 aa2.9□□□□□ -1.95
SF3B1-212ENST00000496458 AK3Q9UIJ7 227 aa2.9□□□□□ -1.95
SF3B1-212ENST00000496458 IER3IP1Q9Y5U9 82 aa2.9□□□□□ -1.95
SF3B1-212ENST00000496458 PIEZO2Q9H5I5 2752 aa2.9□□□□□ -1.95
SF3B1-212ENST00000496458 URB1O60287 2271 aaKnown RBP2.9□□□□□ -1.95
SF3B1-212ENST00000496458 DCHS1Q96JQ0 3298 aa2.9□□□□□ -1.95
SF3B1-212ENST00000496458 RP1P56715 2156 aa2.9□□□□□ -1.95
SF3B1-212ENST00000496458 FRYQ5TBA9 3013 aa2.9□□□□□ -1.95
SF3B1-212ENST00000496458 FREM2Q5SZK8 3169 aa2.89□□□□□ -1.95
SF3B1-212ENST00000496458 TRAV36DV7A0A075B6V5 113 aa2.89□□□□□ -1.95
SF3B1-212ENST00000496458 IGHV1-45A0A0A0MS14 117 aa2.89□□□□□ -1.95
SF3B1-212ENST00000496458 A0A0D9SEW6 157 aa2.89□□□□□ -1.95
SF3B1-212ENST00000496458 C5orf63A6NC05 138 aa2.89□□□□□ -1.95
SF3B1-212ENST00000496458 MEIS3P1A6NDR6 274 aa2.89□□□□□ -1.95
SF3B1-212ENST00000496458 A6NIN4 97 aa2.89□□□□□ -1.95
SF3B1-212ENST00000496458 F8W1H4 67 aa2.89□□□□□ -1.95
SF3B1-212ENST00000496458 H0YJW9 148 aa2.89□□□□□ -1.95
SF3B1-212ENST00000496458 M0R129 80 aa2.89□□□□□ -1.95
SF3B1-212ENST00000496458 BPY2O14599 106 aa2.89□□□□□ -1.95
SF3B1-212ENST00000496458 RER1O15258 196 aa2.89□□□□□ -1.95
SF3B1-212ENST00000496458 APOA2P02652 100 aa2.89□□□□□ -1.95
SF3B1-212ENST00000496458 LGALS1P09382 135 aaKnown RBP2.89□□□□□ -1.95
SF3B1-212ENST00000496458 SPINK8P0C7L1 97 aa2.89□□□□□ -1.95
SF3B1-212ENST00000496458 ZNF688P0C7X2 276 aa2.89□□□□□ -1.95
SF3B1-212ENST00000496458 IGHV1-8P0DP01 117 aa2.89□□□□□ -1.95
SF3B1-212ENST00000496458 SRIP30626 198 aa2.89□□□□□ -1.95
SF3B1-212ENST00000496458 S100A3P33764 101 aa2.89□□□□□ -1.95
SF3B1-212ENST00000496458 OPRM1P35372 400 aa2.89□□□□□ -1.95
SF3B1-212ENST00000496458 GLRXP35754 106 aa2.89□□□□□ -1.95
SF3B1-212ENST00000496458 ZNF93P35789 620 aaPredicted RBP2.89□□□□□ -1.95
SF3B1-212ENST00000496458 TNFAIP6P98066 277 aaPredicted RBP2.89□□□□□ -1.95
SF3B1-212ENST00000496458 ATP5G2Q06055 141 aa2.89□□□□□ -1.95
SF3B1-212ENST00000496458 RNASE13Q5GAN3 156 aaKnown RBP2.89□□□□□ -1.95
SF3B1-212ENST00000496458 IBA57Q5T440 356 aaKnown RBP2.89□□□□□ -1.95
SF3B1-212ENST00000496458 GLIPR1L1Q6UWM5 242 aa2.89□□□□□ -1.95
SF3B1-212ENST00000496458 CNTRLQ7Z7A1 2325 aa2.89□□□□□ -1.95
SF3B1-212ENST00000496458 LRP11Q86VZ4 500 aa2.89□□□□□ -1.95
SF3B1-212ENST00000496458 UMODL1-AS1Q8N2C9 162 aa2.89□□□□□ -1.95
SF3B1-212ENST00000496458 ANKRD29Q8N6D5 301 aa2.89□□□□□ -1.95
SF3B1-212ENST00000496458 SIGLECL1Q8N7X8 197 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms