RNA–Protein interactions for RNA: ENST00000495784.1

CLCNKA-207, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 727 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-207ENST00000495784 ZNF415Q09FC8 603 aa12.67□□□□□ -0.38
CLCNKA-207ENST00000495784 Q6ZQT7 251 aa12.67□□□□□ -0.38
CLCNKA-207ENST00000495784 MAPKAPK5-AS1Q8N8E1 139 aa12.67□□□□□ -0.38
CLCNKA-207ENST00000495784 SIVA1O15304 175 aa12.66□□□□□ -0.38
CLCNKA-207ENST00000495784 LINC00315P59091 139 aa12.66□□□□□ -0.38
CLCNKA-207ENST00000495784 UBE2L3P68036 154 aaKnown RBP12.66□□□□□ -0.38
CLCNKA-207ENST00000495784 SLAQ13239 276 aa12.66□□□□□ -0.38
CLCNKA-207ENST00000495784 ATP5SQ99766 215 aa12.66□□□□□ -0.38
CLCNKA-207ENST00000495784 PRO0255Q9UI72 69 aa12.66□□□□□ -0.38
CLCNKA-207ENST00000495784 INMT-MINDY4F8WBC2 141 aa12.65□□□□□ -0.38
CLCNKA-207ENST00000495784 NXPH4O95158 308 aa12.65□□□□□ -0.38
CLCNKA-207ENST00000495784 MUC21Q5SSG8 566 aa12.65□□□□□ -0.38
CLCNKA-207ENST00000495784 LYPD1Q8N2G4 141 aa12.65□□□□□ -0.38
CLCNKA-207ENST00000495784 PPP1R1CQ8WVI7 109 aa12.65□□□□□ -0.38
CLCNKA-207ENST00000495784 HHLA3Q9XRX5 114 aa12.65□□□□□ -0.38
CLCNKA-207ENST00000495784 RBAKDNA6NC62 111 aa12.64□□□□□ -0.39
CLCNKA-207ENST00000495784 H2BFSP57053 126 aa12.64□□□□□ -0.39
CLCNKA-207ENST00000495784 ZNF266Q14584 549 aa12.64□□□□□ -0.39
CLCNKA-207ENST00000495784 FFAR4Q5NUL3 377 aa12.64□□□□□ -0.39
CLCNKA-207ENST00000495784 SCGB1C1Q8TD33 95 aa12.64□□□□□ -0.39
CLCNKA-207ENST00000495784 C8orf49Q96NF6 230 aa12.64□□□□□ -0.39
CLCNKA-207ENST00000495784 IFNA5P01569 189 aa12.63□□□□□ -0.39
CLCNKA-207ENST00000495784 PET100P0DJ07 73 aa12.63□□□□□ -0.39
CLCNKA-207ENST00000495784 CRYBA4P53673 196 aa12.63□□□□□ -0.39
CLCNKA-207ENST00000495784 TAS2R45P59539 299 aa12.63□□□□□ -0.39
CLCNKA-207ENST00000495784 KRTAP10-2P60368 255 aa12.63□□□□□ -0.39
CLCNKA-207ENST00000495784 MRPL23Q16540 153 aaKnown RBP12.63□□□□□ -0.39
CLCNKA-207ENST00000495784 KHDC3LQ587J8 217 aa12.63□□□□□ -0.39
CLCNKA-207ENST00000495784 HSPB11Q9Y547 144 aa12.63□□□□□ -0.39
CLCNKA-207ENST00000495784 TRGV4A0A0C4DH28 118 aa12.62□□□□□ -0.39
CLCNKA-207ENST00000495784 SSNA1O43805 119 aa12.62□□□□□ -0.39
CLCNKA-207ENST00000495784 FHL2Q14192 279 aa12.62□□□□□ -0.39
CLCNKA-207ENST00000495784 APOBP04114 4563 aaKnown RBP12.61□□□□□ -0.39
CLCNKA-207ENST00000495784 DIRC3C9JPN6 131 aa12.61□□□□□ -0.39
CLCNKA-207ENST00000495784 MPC2O95563 127 aa12.61□□□□□ -0.39
CLCNKA-207ENST00000495784 IFITM3Q01628 133 aa12.61□□□□□ -0.39
CLCNKA-207ENST00000495784 FAM159AQ6UWV7 190 aa12.61□□□□□ -0.39
CLCNKA-207ENST00000495784 NEGR1Q7Z3B1 354 aa12.61□□□□□ -0.39
CLCNKA-207ENST00000495784 HYLS1Q96M11 299 aa12.61□□□□□ -0.39
CLCNKA-207ENST00000495784 SMIM3Q9BZL3 60 aa12.61□□□□□ -0.39
CLCNKA-207ENST00000495784 MDFICQ9P1T7 246 aa12.61□□□□□ -0.39
CLCNKA-207ENST00000495784 LENEPQ9Y5L5 61 aa12.61□□□□□ -0.39
CLCNKA-207ENST00000495784 DNAH5Q8TE73 4624 aa12.61□□□□□ -0.39
CLCNKA-207ENST00000495784 TRGV11A0A075B6L2 103 aa12.6□□□□□ -0.39
CLCNKA-207ENST00000495784 TMEM183BQ1AE95 376 aa12.6□□□□□ -0.39
CLCNKA-207ENST00000495784 LYPD5Q6UWN5 251 aa12.6□□□□□ -0.39
CLCNKA-207ENST00000495784 TMEM183AQ8IXX5 376 aa12.6□□□□□ -0.39
CLCNKA-207ENST00000495784 CMTM2Q8TAZ6 248 aa12.6□□□□□ -0.39
CLCNKA-207ENST00000495784 MARVELD1Q9BSK0 173 aa12.6□□□□□ -0.39
CLCNKA-207ENST00000495784 NAGKQ9UJ70 344 aa12.6□□□□□ -0.39
CLCNKA-207ENST00000495784 SFTA3P0C7M3 94 aa12.59□□□□□ -0.39
CLCNKA-207ENST00000495784 RPL12P30050 165 aaKnown RBP12.59□□□□□ -0.39
CLCNKA-207ENST00000495784 Q6AWC8 147 aa12.59□□□□□ -0.39
CLCNKA-207ENST00000495784 Q6ZRN7 208 aaPredicted RBP12.59□□□□□ -0.39
CLCNKA-207ENST00000495784 Q8N1X5 172 aa12.59□□□□□ -0.39
CLCNKA-207ENST00000495784 PCNPQ8WW12 178 aaKnown RBP12.59□□□□□ -0.39
CLCNKA-207ENST00000495784 SPXQ9BT56 116 aa12.59□□□□□ -0.39
CLCNKA-207ENST00000495784 OTORQ9NRC9 128 aa12.59□□□□□ -0.39
CLCNKA-207ENST00000495784 RPH3ALQ9UNE2 315 aa12.59□□□□□ -0.39
CLCNKA-207ENST00000495784 EREGO14944 169 aa12.58□□□□□ -0.4
CLCNKA-207ENST00000495784 EIF3GO75821 320 aaKnown RBP eCLIP12.58□□□□□ -0.4
CLCNKA-207ENST00000495784 SRIP30626 198 aa12.58□□□□□ -0.4
CLCNKA-207ENST00000495784 FAM74A1Q5RGS3 127 aa12.58□□□□□ -0.4
CLCNKA-207ENST00000495784 OR10G4Q8NGN3 311 aa12.58□□□□□ -0.4
CLCNKA-207ENST00000495784 TMED6Q8WW62 240 aa12.58□□□□□ -0.4
CLCNKA-207ENST00000495784 RASL10AQ92737 203 aa12.58□□□□□ -0.4
CLCNKA-207ENST00000495784 ZNF479Q96JC4 524 aa12.58□□□□□ -0.4
CLCNKA-207ENST00000495784 SCRT2Q9NQ03 307 aa12.58□□□□□ -0.4
CLCNKA-207ENST00000495784 TRAV9-2A0A087WT02 112 aa12.57□□□□□ -0.4
CLCNKA-207ENST00000495784 PGPA6NDG6 321 aa12.57□□□□□ -0.4
CLCNKA-207ENST00000495784 DEFA1P59665 94 aa12.57□□□□□ -0.4
CLCNKA-207ENST00000495784 DEFA3P59666 94 aa12.57□□□□□ -0.4
CLCNKA-207ENST00000495784 ERVFC1-1P60608 527 aa12.57□□□□□ -0.4
CLCNKA-207ENST00000495784 IQCF2Q8IXL9 164 aa12.57□□□□□ -0.4
CLCNKA-207ENST00000495784 MBD2Q9UBB5 411 aa12.57□□□□□ -0.4
CLCNKA-207ENST00000495784 A0A1W2PPV4 95 aa12.56□□□□□ -0.4
CLCNKA-207ENST00000495784 K7EQD1 137 aa12.56□□□□□ -0.4
CLCNKA-207ENST00000495784 GYPEP15421 78 aa12.56□□□□□ -0.4
CLCNKA-207ENST00000495784 ACOT6Q3I5F7 207 aaPredicted RBP12.56□□□□□ -0.4
CLCNKA-207ENST00000495784 NFE4Q86UQ8 179 aa12.56□□□□□ -0.4
CLCNKA-207ENST00000495784 PTTG2Q9NZH5 202 aa12.56□□□□□ -0.4
CLCNKA-207ENST00000495784 LY96Q9Y6Y9 160 aa12.56□□□□□ -0.4
CLCNKA-207ENST00000495784 ORM1P02763 201 aa12.55□□□□□ -0.4
CLCNKA-207ENST00000495784 TDRG1Q3Y452 100 aa12.55□□□□□ -0.4
CLCNKA-207ENST00000495784 PQLC2Q6ZP29 291 aa12.55□□□□□ -0.4
CLCNKA-207ENST00000495784 GOLT1AQ6ZVE7 132 aa12.55□□□□□ -0.4
CLCNKA-207ENST00000495784 PGPEP1Q9NXJ5 209 aa12.55□□□□□ -0.4
CLCNKA-207ENST00000495784 TNFRSF18Q9Y5U5 241 aa12.55□□□□□ -0.4
CLCNKA-207ENST00000495784 TRAV21A0A0B4J279 112 aa12.54□□□□□ -0.4
CLCNKA-207ENST00000495784 C9JCJ5 164 aa12.54□□□□□ -0.4
CLCNKA-207ENST00000495784 OR4C5Q8NGB2 326 aa12.54□□□□□ -0.4
CLCNKA-207ENST00000495784 TXNDC17Q9BRA2 123 aa12.54□□□□□ -0.4
CLCNKA-207ENST00000495784 WFDC1Q9HC57 220 aa12.54□□□□□ -0.4
CLCNKA-207ENST00000495784 TRAV4A0A0B4J268 109 aa12.53□□□□□ -0.4
CLCNKA-207ENST00000495784 M0R2P5 195 aa12.53□□□□□ -0.4
CLCNKA-207ENST00000495784 EVI2AP22794 236 aa12.53□□□□□ -0.4
CLCNKA-207ENST00000495784 TREM1Q9NP99 234 aa12.53□□□□□ -0.4
CLCNKA-207ENST00000495784 IGHV3-16A0A0C4DH30 117 aa12.52□□□□□ -0.41
CLCNKA-207ENST00000495784 A6NHS1 94 aa12.52□□□□□ -0.41
CLCNKA-207ENST00000495784 F6UZH7 168 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms