RNA–Protein interactions for RNA: ENST00000495693.1

EPHA4-213, Transcript of EPH receptor A4, humanhuman

TSL 3

Gene EPHA4, Length 588 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-213ENST00000495693 ZNF747Q9BV97 191 aa6.56□□□□□ -1.36
EPHA4-213ENST00000495693 TPPP3Q9BW30 176 aa6.56□□□□□ -1.36
EPHA4-213ENST00000495693 RHPN1-AS1Q9BWJ2 59 aa6.56□□□□□ -1.36
EPHA4-213ENST00000495693 TMEM191AQ9H0A3 160 aa6.56□□□□□ -1.36
EPHA4-213ENST00000495693 SMPXQ9UHP9 88 aa6.56□□□□□ -1.36
EPHA4-213ENST00000495693 LINC00527Q9UJ94 153 aa6.56□□□□□ -1.36
EPHA4-213ENST00000495693 NCOR2Q9Y618 2525 aa6.55□□□□□ -1.36
EPHA4-213ENST00000495693 SPTBN4Q9H254 2564 aa6.55□□□□□ -1.36
EPHA4-213ENST00000495693 TRAV8-2A0A0B4J237 113 aa6.55□□□□□ -1.36
EPHA4-213ENST00000495693 KIR2DL5BA0A0G2JN68 375 aa6.55□□□□□ -1.36
EPHA4-213ENST00000495693 KIR2DL5BA0A0G2JPC4 375 aa6.55□□□□□ -1.36
EPHA4-213ENST00000495693 J3QKU1 62 aa6.55□□□□□ -1.36
EPHA4-213ENST00000495693 LEPROTL1O95214 131 aa6.55□□□□□ -1.36
EPHA4-213ENST00000495693 KRTDAPP60985 99 aa6.55□□□□□ -1.36
EPHA4-213ENST00000495693 TWIST1Q15672 202 aa6.55□□□□□ -1.36
EPHA4-213ENST00000495693 PSMG4Q5JS54 123 aa6.55□□□□□ -1.36
EPHA4-213ENST00000495693 GDF5OSQ5U4N7 250 aa6.55□□□□□ -1.36
EPHA4-213ENST00000495693 FAM104BQ5XKR9 115 aa6.55□□□□□ -1.36
EPHA4-213ENST00000495693 LYZL1Q6UWQ5 148 aa6.55□□□□□ -1.36
EPHA4-213ENST00000495693 Q6ZWC4 215 aa6.55□□□□□ -1.36
EPHA4-213ENST00000495693 NIT1Q86X76 327 aa6.55□□□□□ -1.36
EPHA4-213ENST00000495693 KIR2DL5AQ8N109 375 aa6.55□□□□□ -1.36
EPHA4-213ENST00000495693 Q8N2B8 174 aa6.55□□□□□ -1.36
EPHA4-213ENST00000495693 RNF152Q8N8N0 203 aa6.55□□□□□ -1.36
EPHA4-213ENST00000495693 NRGNQ92686 78 aa6.55□□□□□ -1.36
EPHA4-213ENST00000495693 C20orf144Q9BQM9 153 aa6.55□□□□□ -1.36
EPHA4-213ENST00000495693 AGPAT4-IT1Q9H0P7 198 aa6.55□□□□□ -1.36
EPHA4-213ENST00000495693 ATRXP46100 2492 aa6.55□□□□□ -1.36
EPHA4-213ENST00000495693 IGHV3OR16-8A0A075B7F1 116 aa6.54□□□□□ -1.36
EPHA4-213ENST00000495693 IGHV3-66A0A0C4DH42 116 aa6.54□□□□□ -1.36
EPHA4-213ENST00000495693 SOCS3O14543 225 aa6.54□□□□□ -1.36
EPHA4-213ENST00000495693 NUPR1O60356 82 aa6.54□□□□□ -1.36
EPHA4-213ENST00000495693 PPP1R17O96001 155 aa6.54□□□□□ -1.36
EPHA4-213ENST00000495693 IGHV3-11P01762 117 aa6.54□□□□□ -1.36
EPHA4-213ENST00000495693 FRMD6-AS1P0C7T7 363 aa6.54□□□□□ -1.36
EPHA4-213ENST00000495693 CTAG1AP78358 180 aa6.54□□□□□ -1.36
EPHA4-213ENST00000495693 OR10AG1Q8NH19 301 aa6.54□□□□□ -1.36
EPHA4-213ENST00000495693 PRSS3P2Q8NHM4 247 aa6.54□□□□□ -1.36
EPHA4-213ENST00000495693 IL17DQ8TAD2 202 aa6.54□□□□□ -1.36
EPHA4-213ENST00000495693 Q8TAT8 98 aa6.54□□□□□ -1.36
EPHA4-213ENST00000495693 MYOZ3Q8TDC0 251 aa6.54□□□□□ -1.36
EPHA4-213ENST00000495693 RCHY1Q96PM5 261 aa6.54□□□□□ -1.36
EPHA4-213ENST00000495693 NDUFAF3Q9BU61 184 aa6.54□□□□□ -1.36
EPHA4-213ENST00000495693 TMEM70Q9BUB7 260 aa6.54□□□□□ -1.36
EPHA4-213ENST00000495693 MAP1LC3CQ9BXW4 147 aa6.54□□□□□ -1.36
EPHA4-213ENST00000495693 PEMTQ9UBM1 199 aa6.54□□□□□ -1.36
EPHA4-213ENST00000495693 U3KQK5 164 aa6.54□□□□□ -1.36
EPHA4-213ENST00000495693 SPTBN1Q01082 2364 aaKnown RBP6.54□□□□□ -1.36
EPHA4-213ENST00000495693 PKD1L2Q7Z442 2459 aa6.53□□□□□ -1.36
EPHA4-213ENST00000495693 IGHV4-4A0A075B6R2 117 aa6.53□□□□□ -1.36
EPHA4-213ENST00000495693 TRAV2A0A0B4J234 112 aa6.53□□□□□ -1.36
EPHA4-213ENST00000495693 A0A1B0GUS0 222 aa6.53□□□□□ -1.36
EPHA4-213ENST00000495693 LINC00587B1AMM8 73 aa6.53□□□□□ -1.36
EPHA4-213ENST00000495693 HSBP1L1C9JCN9 74 aa6.53□□□□□ -1.36
EPHA4-213ENST00000495693 CRXO43186 299 aaPredicted RBP6.53□□□□□ -1.36
EPHA4-213ENST00000495693 ZNF207O43670 478 aaKnown RBP6.53□□□□□ -1.36
EPHA4-213ENST00000495693 DUSP14O95147 198 aaKnown RBP6.53□□□□□ -1.36
EPHA4-213ENST00000495693 TSPOP30536 169 aa6.53□□□□□ -1.36
EPHA4-213ENST00000495693 CKS2P33552 79 aa6.53□□□□□ -1.36
EPHA4-213ENST00000495693 LEPP41159 167 aa6.53□□□□□ -1.36
EPHA4-213ENST00000495693 PET117Q6UWS5 81 aa6.53□□□□□ -1.36
EPHA4-213ENST00000495693 UNQ9165/PRO28630Q6UXU0 137 aa6.53□□□□□ -1.36
EPHA4-213ENST00000495693 APRG1Q8IVJ8 170 aa6.53□□□□□ -1.36
EPHA4-213ENST00000495693 ZNF664Q8N3J9 261 aa6.53□□□□□ -1.36
EPHA4-213ENST00000495693 RNF182Q8N6D2 247 aa6.53□□□□□ -1.36
EPHA4-213ENST00000495693 OR8A1Q8NGG7 326 aa6.53□□□□□ -1.36
EPHA4-213ENST00000495693 PRELID3AQ96N28 172 aa6.53□□□□□ -1.36
EPHA4-213ENST00000495693 KLK15Q9H2R5 256 aa6.53□□□□□ -1.36
EPHA4-213ENST00000495693 MAP1LC3AQ9H492 121 aa6.53□□□□□ -1.36
EPHA4-213ENST00000495693 NXT2Q9NPJ8 142 aaKnown RBP6.53□□□□□ -1.36
EPHA4-213ENST00000495693 DOPEY1Q5JWR5 2465 aa6.52□□□□□ -1.37
EPHA4-213ENST00000495693 TMSB15BA0A087X1C1 80 aa6.52□□□□□ -1.37
EPHA4-213ENST00000495693 LINC01549A6NIU2 74 aa6.52□□□□□ -1.37
EPHA4-213ENST00000495693 HOXA3O43365 443 aaPredicted RBP6.52□□□□□ -1.37
EPHA4-213ENST00000495693 SNAI2O43623 268 aa6.52□□□□□ -1.37
EPHA4-213ENST00000495693 C3orf79P0CE67 100 aa6.52□□□□□ -1.37
EPHA4-213ENST00000495693 GYPEP15421 78 aa6.52□□□□□ -1.37
EPHA4-213ENST00000495693 HLA-DMBP28068 263 aa6.52□□□□□ -1.37
EPHA4-213ENST00000495693 ASIPP42127 132 aa6.52□□□□□ -1.37
EPHA4-213ENST00000495693 ERCC8Q13216 396 aa6.52□□□□□ -1.37
EPHA4-213ENST00000495693 SPANXN1Q5VSR9 72 aa6.52□□□□□ -1.37
EPHA4-213ENST00000495693 EBLN2Q6P2I7 272 aa6.52□□□□□ -1.37
EPHA4-213ENST00000495693 FOXC2Q99958 501 aa6.52□□□□□ -1.37
EPHA4-213ENST00000495693 ZNF702PQ9H963 129 aa6.52□□□□□ -1.37
EPHA4-213ENST00000495693 IGHV3OR16-13A0A075B7E8 117 aa6.51□□□□□ -1.37
EPHA4-213ENST00000495693 IGHV3-49A0A0A0MS15 119 aa6.51□□□□□ -1.37
EPHA4-213ENST00000495693 IGHV3-74A0A0B4J1X5 117 aa6.51□□□□□ -1.37
EPHA4-213ENST00000495693 PRAC2D3DTV9 90 aa6.51□□□□□ -1.37
EPHA4-213ENST00000495693 D6R8Y8 96 aa6.51□□□□□ -1.37
EPHA4-213ENST00000495693 K7EMI3 77 aa6.51□□□□□ -1.37
EPHA4-213ENST00000495693 TCF21O43680 179 aa6.51□□□□□ -1.37
EPHA4-213ENST00000495693 TRBV12-3P01733 135 aa6.51□□□□□ -1.37
EPHA4-213ENST00000495693 S100A4P26447 101 aaKnown RBP6.51□□□□□ -1.37
EPHA4-213ENST00000495693 G0S2P27469 103 aa6.51□□□□□ -1.37
EPHA4-213ENST00000495693 ZNF80P51504 273 aaPredicted RBP6.51□□□□□ -1.37
EPHA4-213ENST00000495693 Q8N1X5 172 aa6.51□□□□□ -1.37
EPHA4-213ENST00000495693 MRAP2Q96G30 205 aa6.51□□□□□ -1.37
EPHA4-213ENST00000495693 NBASA2RRP1 2371 aa6.51□□□□□ -1.37
EPHA4-213ENST00000495693 IGHV1-24A0A0C4DH33 117 aa6.5□□□□□ -1.37
EPHA4-213ENST00000495693 HBDP02042 147 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms