RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 ZNF727A8MUV8 499 aa12.33□□□□□ -0.44
SNX17-209ENST00000494893 F8W036 122 aa12.33□□□□□ -0.44
SNX17-209ENST00000494893 K7EQM0 130 aa12.33□□□□□ -0.44
SNX17-209ENST00000494893 S100A9P06702 114 aaKnown RBP12.33□□□□□ -0.44
SNX17-209ENST00000494893 ADCYAP1P18509 176 aa12.33□□□□□ -0.44
SNX17-209ENST00000494893 RPL35P42766 123 aaKnown RBP12.33□□□□□ -0.44
SNX17-209ENST00000494893 KIR3DS1Q14943 382 aa12.33□□□□□ -0.44
SNX17-209ENST00000494893 ZNF674Q2M3X9 581 aa12.33□□□□□ -0.44
SNX17-209ENST00000494893 C10orf91Q5T1B1 145 aa12.33□□□□□ -0.44
SNX17-209ENST00000494893 NEU1Q99519 415 aa12.33□□□□□ -0.44
SNX17-209ENST00000494893 DERL1Q9BUN8 251 aa12.33□□□□□ -0.44
SNX17-209ENST00000494893 RYR3Q15413 4870 aa12.33□□□□□ -0.44
SNX17-209ENST00000494893 TRAV12-2A0A075B6T6 113 aa12.32□□□□□ -0.44
SNX17-209ENST00000494893 IGHV3OR16-12A0A075B7B8 117 aa12.32□□□□□ -0.44
SNX17-209ENST00000494893 RBAKDNA6NC62 111 aa12.32□□□□□ -0.44
SNX17-209ENST00000494893 TAS2R60P59551 318 aa12.32□□□□□ -0.44
SNX17-209ENST00000494893 NANOS2P60321 138 aaKnown RBP12.32□□□□□ -0.44
SNX17-209ENST00000494893 TMEM183BQ1AE95 376 aa12.32□□□□□ -0.44
SNX17-209ENST00000494893 LINC00479Q96M42 142 aa12.32□□□□□ -0.44
SNX17-209ENST00000494893 SMIM7Q9BQ49 75 aa12.32□□□□□ -0.44
SNX17-209ENST00000494893 IGKV2-40A0A087WW87 121 aaPredicted RBP12.31□□□□□ -0.44
SNX17-209ENST00000494893 TRAV34A0A0B4J273 112 aa12.31□□□□□ -0.44
SNX17-209ENST00000494893 NPIPB6E9PJ23 425 aa12.31□□□□□ -0.44
SNX17-209ENST00000494893 IGKV2D-40P01614 121 aaPredicted RBP12.31□□□□□ -0.44
SNX17-209ENST00000494893 IGLV2-11P01706 119 aa12.31□□□□□ -0.44
SNX17-209ENST00000494893 AMBPP02760 352 aa12.31□□□□□ -0.44
SNX17-209ENST00000494893 CT45A10P0DMU9 189 aa12.31□□□□□ -0.44
SNX17-209ENST00000494893 TMEM75Q8N9X5 138 aa12.31□□□□□ -0.44
SNX17-209ENST00000494893 FMC1Q96HJ9 113 aa12.31□□□□□ -0.44
SNX17-209ENST00000494893 CELA1Q9UNI1 258 aa12.31□□□□□ -0.44
SNX17-209ENST00000494893 CARHSP1Q9Y2V2 147 aaKnown RBP12.31□□□□□ -0.44
SNX17-209ENST00000494893 TRBV6-1A0A0K0K1D8 114 aa12.3□□□□□ -0.44
SNX17-209ENST00000494893 FBLL1A6NHQ2 334 aaKnown RBP12.3□□□□□ -0.44
SNX17-209ENST00000494893 C9JCJ5 164 aa12.3□□□□□ -0.44
SNX17-209ENST00000494893 PRM2P04554 102 aa12.3□□□□□ -0.44
SNX17-209ENST00000494893 UBE2G1P62253 170 aa12.3□□□□□ -0.44
SNX17-209ENST00000494893 ERCC8Q13216 396 aa12.3□□□□□ -0.44
SNX17-209ENST00000494893 OR10J6PQ8NGY7 276 aa12.3□□□□□ -0.44
SNX17-209ENST00000494893 LYSTQ99698 3801 aa12.3□□□□□ -0.44
SNX17-209ENST00000494893 TRBV20OR9-2A0A075B6H5 130 aa12.29□□□□□ -0.44
SNX17-209ENST00000494893 TRAV8-1A0A0A6YYK1 113 aa12.29□□□□□ -0.44
SNX17-209ENST00000494893 INSP01308 110 aa12.29□□□□□ -0.44
SNX17-209ENST00000494893 S100A1P23297 94 aa12.29□□□□□ -0.44
SNX17-209ENST00000494893 FLI1Q01543 452 aaPredicted RBP12.29□□□□□ -0.44
SNX17-209ENST00000494893 TMEM241Q24JQ0 296 aa12.29□□□□□ -0.44
SNX17-209ENST00000494893 C9orf47Q6ZRZ4 202 aa12.29□□□□□ -0.44
SNX17-209ENST00000494893 C11orf45Q8TAV5 145 aa12.29□□□□□ -0.44
SNX17-209ENST00000494893 SGK494Q96LW2 274 aa12.29□□□□□ -0.44
SNX17-209ENST00000494893 VGLL1Q99990 258 aa12.29□□□□□ -0.44
SNX17-209ENST00000494893 NIPSNAP3BQ9BS92 247 aa12.29□□□□□ -0.44
SNX17-209ENST00000494893 PSG8Q9UQ74 426 aa12.29□□□□□ -0.44
SNX17-209ENST00000494893 GOLT1BQ9Y3E0 138 aa12.29□□□□□ -0.44
SNX17-209ENST00000494893 DNAH1Q9P2D7 4330 aa12.29□□□□□ -0.44
SNX17-209ENST00000494893 CXorf65A6NEN9 183 aa12.28□□□□□ -0.44
SNX17-209ENST00000494893 CENPWQ5EE01 88 aa12.28□□□□□ -0.44
SNX17-209ENST00000494893 AGPAT4-IT1Q9H0P7 198 aa12.28□□□□□ -0.44
SNX17-209ENST00000494893 NAT8Q9UHE5 227 aa12.28□□□□□ -0.44
SNX17-209ENST00000494893 RYR2Q92736 4967 aa12.27□□□□□ -0.44
SNX17-209ENST00000494893 SMIM9A6NGZ8 99 aa12.27□□□□□ -0.45
SNX17-209ENST00000494893 CDKN1BP46527 198 aa12.27□□□□□ -0.45
SNX17-209ENST00000494893 GNG4P50150 75 aa12.27□□□□□ -0.45
SNX17-209ENST00000494893 PRNTQ86SH4 94 aa12.27□□□□□ -0.45
SNX17-209ENST00000494893 Q86TA4 180 aa12.27□□□□□ -0.45
SNX17-209ENST00000494893 BAGE2Q86Y30 109 aa12.27□□□□□ -0.45
SNX17-209ENST00000494893 FAM19A4Q96LR4 140 aa12.27□□□□□ -0.45
SNX17-209ENST00000494893 LINC00477Q96M19 166 aa12.27□□□□□ -0.45
SNX17-209ENST00000494893 ODF3Q96PU9 254 aa12.27□□□□□ -0.45
SNX17-209ENST00000494893 SDF2L1Q9HCN8 221 aa12.27□□□□□ -0.45
SNX17-209ENST00000494893 LY96Q9Y6Y9 160 aa12.27□□□□□ -0.45
SNX17-209ENST00000494893 ALMS1Q8TCU4 4167 aa12.26□□□□□ -0.45
SNX17-209ENST00000494893 ZNF705GA8MUZ8 300 aaPredicted RBP12.26□□□□□ -0.45
SNX17-209ENST00000494893 LTAP01374 205 aa12.26□□□□□ -0.45
SNX17-209ENST00000494893 APOC3P02656 99 aa12.26□□□□□ -0.45
SNX17-209ENST00000494893 GFI1BQ5VTD9 330 aa12.26□□□□□ -0.45
SNX17-209ENST00000494893 CEMP1Q6PRD7 247 aaPredicted RBP12.26□□□□□ -0.45
SNX17-209ENST00000494893 OCC1Q8TAD7 63 aa12.26□□□□□ -0.45
SNX17-209ENST00000494893 PHLDA1Q8WV24 401 aaPredicted RBP12.26□□□□□ -0.45
SNX17-209ENST00000494893 TVP23CQ96ET8 276 aa12.26□□□□□ -0.45
SNX17-209ENST00000494893 PPP1R14DQ9NXH3 145 aa12.26□□□□□ -0.45
SNX17-209ENST00000494893 ZFP30Q9Y2G7 519 aa12.26□□□□□ -0.45
SNX17-209ENST00000494893 PGPEP1LA6NFU8 196 aa12.25□□□□□ -0.45
SNX17-209ENST00000494893 IGLV2-8P01709 118 aa12.25□□□□□ -0.45
SNX17-209ENST00000494893 AZU1P20160 251 aa12.25□□□□□ -0.45
SNX17-209ENST00000494893 ZNF138P52744 262 aa12.25□□□□□ -0.45
SNX17-209ENST00000494893 PNRC1Q12796 327 aaPredicted RBP12.25□□□□□ -0.45
SNX17-209ENST00000494893 C12orf74Q32Q52 190 aa12.25□□□□□ -0.45
SNX17-209ENST00000494893 TMEM78Q5T7P6 136 aa12.25□□□□□ -0.45
SNX17-209ENST00000494893 SMIM12Q96EX1 92 aa12.25□□□□□ -0.45
SNX17-209ENST00000494893 ZNF492Q9P255 531 aa12.25□□□□□ -0.45
SNX17-209ENST00000494893 PLAC8L1A1L4L8 177 aa12.24□□□□□ -0.45
SNX17-209ENST00000494893 J3KRW8 73 aa12.24□□□□□ -0.45
SNX17-209ENST00000494893 EMP1P54849 157 aa12.24□□□□□ -0.45
SNX17-209ENST00000494893 RPL23P62829 140 aaKnown RBP12.24□□□□□ -0.45
SNX17-209ENST00000494893 RRN3P1Q2M238 152 aa12.24□□□□□ -0.45
SNX17-209ENST00000494893 SAPCD1Q5SSQ6 148 aa12.24□□□□□ -0.45
SNX17-209ENST00000494893 Q6ZTC4 211 aa12.24□□□□□ -0.45
SNX17-209ENST00000494893 LINC01551Q86U37 167 aa12.24□□□□□ -0.45
SNX17-209ENST00000494893 TMEM183AQ8IXX5 376 aa12.24□□□□□ -0.45
SNX17-209ENST00000494893 Q8TAT8 98 aa12.24□□□□□ -0.45
SNX17-209ENST00000494893 TMEM208Q9BTX3 173 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms