RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 HERVK_113P61574 105 aa3.68□□□□□ -1.82
PRKD3-210ENST00000494667 KLK9Q2XQG4 91 aa3.68□□□□□ -1.82
PRKD3-210ENST00000494667 VMA21Q3ZAQ7 101 aa3.68□□□□□ -1.82
PRKD3-210ENST00000494667 KLK9Q9UKQ9 250 aa3.68□□□□□ -1.82
PRKD3-210ENST00000494667 TEX22C9J3V5 150 aa3.68□□□□□ -1.82
PRKD3-210ENST00000494667 IGKV1-17P01599 117 aa3.68□□□□□ -1.82
PRKD3-210ENST00000494667 CRIP2P52943 208 aaPredicted RBP3.68□□□□□ -1.82
PRKD3-210ENST00000494667 HOXA4Q00056 320 aaPredicted RBP3.68□□□□□ -1.82
PRKD3-210ENST00000494667 RTTNQ86VV8 2226 aa3.68□□□□□ -1.82
PRKD3-210ENST00000494667 UNC13CQ8NB66 2214 aa3.68□□□□□ -1.82
PRKD3-210ENST00000494667 TRAV17A0A0B4J275 112 aa3.68□□□□□ -1.82
PRKD3-210ENST00000494667 NDUFC2-KCTD14E9PQ53 114 aa3.68□□□□□ -1.82
PRKD3-210ENST00000494667 K7ESF4 209 aa3.68□□□□□ -1.82
PRKD3-210ENST00000494667 NDUFA3O95167 84 aa3.68□□□□□ -1.82
PRKD3-210ENST00000494667 GAS8-AS1O95177 125 aa3.68□□□□□ -1.82
PRKD3-210ENST00000494667 PPP1R17O96001 155 aa3.68□□□□□ -1.82
PRKD3-210ENST00000494667 CD3EP07766 207 aa3.68□□□□□ -1.82
PRKD3-210ENST00000494667 WFDC3Q8IUB2 231 aa3.68□□□□□ -1.82
PRKD3-210ENST00000494667 MRPL53Q96EL3 112 aaKnown RBP3.68□□□□□ -1.82
PRKD3-210ENST00000494667 TMEM141Q96I45 108 aa3.68□□□□□ -1.82
PRKD3-210ENST00000494667 GAFA1Q96PS6 74 aa3.68□□□□□ -1.82
PRKD3-210ENST00000494667 HTTP42858 3142 aa3.68□□□□□ -1.82
PRKD3-210ENST00000494667 IGHV7-4-1A0A0J9YVY3 117 aa3.68□□□□□ -1.82
PRKD3-210ENST00000494667 TMEM223A0PJW6 202 aa3.68□□□□□ -1.82
PRKD3-210ENST00000494667 Q0VFX4 171 aa3.68□□□□□ -1.82
PRKD3-210ENST00000494667 ANXA2RQ3ZCQ2 193 aa3.68□□□□□ -1.82
PRKD3-210ENST00000494667 C9orf153Q5TBE3 101 aa3.68□□□□□ -1.82
PRKD3-210ENST00000494667 GUSBP11Q6P575 273 aa3.68□□□□□ -1.82
PRKD3-210ENST00000494667 FAM216BQ8N7L0 139 aa3.68□□□□□ -1.82
PRKD3-210ENST00000494667 DEFB118Q96PH6 123 aa3.68□□□□□ -1.82
PRKD3-210ENST00000494667 METTL26Q96S19 204 aa3.68□□□□□ -1.82
PRKD3-210ENST00000494667 RNF5Q99942 180 aa3.68□□□□□ -1.82
PRKD3-210ENST00000494667 CHCHD5Q9BSY4 110 aa3.68□□□□□ -1.82
PRKD3-210ENST00000494667 SRSF9Q13242 221 aaKnown RBP eCLIP3.67□□□□□ -1.82
PRKD3-210ENST00000494667 ZNF491Q8N8L2 437 aa3.67□□□□□ -1.82
PRKD3-210ENST00000494667 TIMM17AQ99595 171 aa3.67□□□□□ -1.82
PRKD3-210ENST00000494667 H7C423 109 aa3.67□□□□□ -1.82
PRKD3-210ENST00000494667 TFF1P04155 84 aa3.67□□□□□ -1.82
PRKD3-210ENST00000494667 ZNF80P51504 273 aaPredicted RBP3.67□□□□□ -1.82
PRKD3-210ENST00000494667 DLX6P56179 175 aa3.67□□□□□ -1.82
PRKD3-210ENST00000494667 PEMTQ9UBM1 199 aa3.67□□□□□ -1.82
PRKD3-210ENST00000494667 DIDO1Q9BTC0 2240 aaKnown RBP3.67□□□□□ -1.82
PRKD3-210ENST00000494667 TEX49A0A1B0GTD5 131 aa3.67□□□□□ -1.82
PRKD3-210ENST00000494667 LST1O00453 97 aa3.67□□□□□ -1.82
PRKD3-210ENST00000494667 TGFAP01135 160 aa3.67□□□□□ -1.82
PRKD3-210ENST00000494667 IGHV1-2P23083 117 aa3.67□□□□□ -1.82
PRKD3-210ENST00000494667 GLRXP35754 106 aa3.67□□□□□ -1.82
PRKD3-210ENST00000494667 Q5XG85 94 aa3.67□□□□□ -1.82
PRKD3-210ENST00000494667 DCANP1Q8TF63 244 aa3.67□□□□□ -1.82
PRKD3-210ENST00000494667 UPK3BQ9BT76 320 aa3.67□□□□□ -1.82
PRKD3-210ENST00000494667 CEP350Q5VT06 3117 aa3.67□□□□□ -1.82
PRKD3-210ENST00000494667 ATOX1O00244 68 aa3.66□□□□□ -1.82
PRKD3-210ENST00000494667 LEPROTO15243 131 aa3.66□□□□□ -1.82
PRKD3-210ENST00000494667 CCL5P13501 91 aa3.66□□□□□ -1.82
PRKD3-210ENST00000494667 SPINK2P20155 84 aa3.66□□□□□ -1.82
PRKD3-210ENST00000494667 CNTFRP26992 372 aa3.66□□□□□ -1.82
PRKD3-210ENST00000494667 TMEM200BQ69YZ2 307 aa3.66□□□□□ -1.82
PRKD3-210ENST00000494667 Q6ZT83 130 aa3.66□□□□□ -1.82
PRKD3-210ENST00000494667 DAND5Q8N907 189 aa3.66□□□□□ -1.82
PRKD3-210ENST00000494667 SCGB3A1Q96QR1 104 aa3.66□□□□□ -1.82
PRKD3-210ENST00000494667 IGIPA6NJ69 53 aa3.66□□□□□ -1.82
PRKD3-210ENST00000494667 NBR2O15453 112 aa3.66□□□□□ -1.82
PRKD3-210ENST00000494667 ZNHIT1O43257 154 aa3.66□□□□□ -1.82
PRKD3-210ENST00000494667 TIMM8AO60220 97 aaPredicted RBP3.66□□□□□ -1.82
PRKD3-210ENST00000494667 NXPH4O95158 308 aa3.66□□□□□ -1.82
PRKD3-210ENST00000494667 ORM1P02763 201 aa3.66□□□□□ -1.82
PRKD3-210ENST00000494667 PMVKQ15126 192 aa3.66□□□□□ -1.82
PRKD3-210ENST00000494667 TRPT1Q86TN4 253 aaKnown RBP3.66□□□□□ -1.82
PRKD3-210ENST00000494667 DPH3Q96FX2 82 aa3.66□□□□□ -1.82
PRKD3-210ENST00000494667 MSRB1Q9NZV6 116 aa3.66□□□□□ -1.82
PRKD3-210ENST00000494667 IGLV3-9A0A075B6K5 115 aa3.66□□□□□ -1.82
PRKD3-210ENST00000494667 H3BVH4 76 aa3.66□□□□□ -1.82
PRKD3-210ENST00000494667 FOLR3P41439 243 aa3.66□□□□□ -1.82
PRKD3-210ENST00000494667 RPL27AP46776 148 aaKnown RBP3.66□□□□□ -1.82
PRKD3-210ENST00000494667 PRR14LQ5THK1 2151 aa3.66□□□□□ -1.82
PRKD3-210ENST00000494667 SCGB1D4Q6XE38 83 aa3.66□□□□□ -1.82
PRKD3-210ENST00000494667 RNF125Q96EQ8 232 aa3.66□□□□□ -1.82
PRKD3-210ENST00000494667 C17orf77Q96MU5 243 aa3.66□□□□□ -1.82
PRKD3-210ENST00000494667 IGHV4OR15-8A0A075B7B6 117 aa3.66□□□□□ -1.82
PRKD3-210ENST00000494667 A0A087WW49 117 aa3.66□□□□□ -1.82
PRKD3-210ENST00000494667 FAM236AA0A1B0GUQ0 79 aa3.66□□□□□ -1.82
PRKD3-210ENST00000494667 FAM236BA0A1B0GV22 79 aa3.66□□□□□ -1.82
PRKD3-210ENST00000494667 K7EIM0 57 aa3.66□□□□□ -1.82
PRKD3-210ENST00000494667 LYZP61626 148 aa3.66□□□□□ -1.82
PRKD3-210ENST00000494667 ZNF876PQ49A33 203 aa3.66□□□□□ -1.82
PRKD3-210ENST00000494667 FAM222AQ5U5X8 452 aa3.66□□□□□ -1.82
PRKD3-210ENST00000494667 Q6ZS46 218 aa3.66□□□□□ -1.82
PRKD3-210ENST00000494667 LEAP2Q969E1 77 aa3.66□□□□□ -1.82
PRKD3-210ENST00000494667 SIT1Q9Y3P8 196 aa3.66□□□□□ -1.82
PRKD3-210ENST00000494667 LENEPQ9Y5L5 61 aa3.66□□□□□ -1.82
PRKD3-210ENST00000494667 LOC107984640A0A0U1RRK4 108 aa3.65□□□□□ -1.82
PRKD3-210ENST00000494667 OOSP1A8MZH6 123 aa3.65□□□□□ -1.82
PRKD3-210ENST00000494667 IGHV1-69P01742 117 aa3.65□□□□□ -1.82
PRKD3-210ENST00000494667 SUMO2P61956 95 aaKnown RBP3.65□□□□□ -1.82
PRKD3-210ENST00000494667 CXorf67Q86X51 503 aaPredicted RBP3.65□□□□□ -1.82
PRKD3-210ENST00000494667 ZNRF1Q8ND25 227 aa3.65□□□□□ -1.82
PRKD3-210ENST00000494667 DUX3Q96PT4 197 aa3.65□□□□□ -1.82
PRKD3-210ENST00000494667 TTTY12Q9BZ98 90 aa3.65□□□□□ -1.82
PRKD3-210ENST00000494667 CTSZQ9UBR2 303 aa3.65□□□□□ -1.82
PRKD3-210ENST00000494667 TRGV11A0A075B6L2 103 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms