RNA–Protein interactions for RNA: ENST00000494339.5

KPNA1-210, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,923 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-210ENST00000494339 LOC105371267A0A1B0GV96 52 aa15.38■□□□□ 0.05
KPNA1-210ENST00000494339 OR4C46A6NHA9 309 aa15.38■□□□□ 0.05
KPNA1-210ENST00000494339 NPIPB6E9PJ23 425 aa15.38■□□□□ 0.05
KPNA1-210ENST00000494339 CD33P20138 364 aa15.38■□□□□ 0.05
KPNA1-210ENST00000494339 ZNF138P52744 262 aa15.38■□□□□ 0.05
KPNA1-210ENST00000494339 TSKUQ8WUA8 353 aa15.38■□□□□ 0.05
KPNA1-210ENST00000494339 A8MWL6 223 aa15.37■□□□□ 0.05
KPNA1-210ENST00000494339 NOTCH3Q9UM47 2321 aa15.37■□□□□ 0.05
KPNA1-210ENST00000494339 DEFB131AP59861 70 aa15.37■□□□□ 0.05
KPNA1-210ENST00000494339 PPP1R14DQ9NXH3 145 aa15.36■□□□□ 0.05
KPNA1-210ENST00000494339 CA1P00915 261 aaPredicted RBP15.35■□□□□ 0.05
KPNA1-210ENST00000494339 LINC00477Q96M19 166 aa15.35■□□□□ 0.05
KPNA1-210ENST00000494339 GFRA4Q9GZZ7 299 aa15.35■□□□□ 0.05
KPNA1-210ENST00000494339 NAT8BQ9UHF3 227 aa15.35■□□□□ 0.05
KPNA1-210ENST00000494339 VWFP04275 2813 aa15.35■□□□□ 0.05
KPNA1-210ENST00000494339 FAM231BA6NCW3 169 aa15.35■□□□□ 0.05
KPNA1-210ENST00000494339 COX19Q49B96 90 aa15.35■□□□□ 0.05
KPNA1-210ENST00000494339 SHISA2Q6UWI4 295 aa15.35■□□□□ 0.05
KPNA1-210ENST00000494339 MAP6D1Q9H9H5 199 aa15.35■□□□□ 0.05
KPNA1-210ENST00000494339 A0A0J9YX75 114 aa15.34■□□□□ 0.05
KPNA1-210ENST00000494339 S100A6P06703 90 aa15.34■□□□□ 0.05
KPNA1-210ENST00000494339 TCL1AP56279 114 aa15.34■□□□□ 0.05
KPNA1-210ENST00000494339 ZNF124Q15973 351 aa15.34■□□□□ 0.05
KPNA1-210ENST00000494339 EBLN2Q6P2I7 272 aa15.34■□□□□ 0.05
KPNA1-210ENST00000494339 PHOX2AO14813 284 aa15.33■□□□□ 0.05
KPNA1-210ENST00000494339 CRIP1P50238 77 aa15.33■□□□□ 0.05
KPNA1-210ENST00000494339 SMUG1Q53HV7 270 aa15.33■□□□□ 0.05
KPNA1-210ENST00000494339 FAM162BQ5T6X4 162 aa15.33■□□□□ 0.05
KPNA1-210ENST00000494339 SAV1Q9H4B6 383 aaPredicted RBP15.33■□□□□ 0.05
KPNA1-210ENST00000494339 IGKV3-20P01619 116 aa15.33■□□□□ 0.04
KPNA1-210ENST00000494339 ACTL10Q5JWF8 245 aa15.33■□□□□ 0.04
KPNA1-210ENST00000494339 FOXI2Q6ZQN5 318 aa15.33■□□□□ 0.04
KPNA1-210ENST00000494339 OR2K2Q8NGT1 345 aa15.33■□□□□ 0.04
KPNA1-210ENST00000494339 NEU1Q99519 415 aa15.33■□□□□ 0.04
KPNA1-210ENST00000494339 LENEPQ9Y5L5 61 aa15.33■□□□□ 0.04
KPNA1-210ENST00000494339 KNCNA6PVL3 124 aa15.32■□□□□ 0.04
KPNA1-210ENST00000494339 J3KRW8 73 aa15.32■□□□□ 0.04
KPNA1-210ENST00000494339 ZNF80P51504 273 aaPredicted RBP15.32■□□□□ 0.04
KPNA1-210ENST00000494339 APRG1Q8IVJ8 170 aa15.32■□□□□ 0.04
KPNA1-210ENST00000494339 OR2D3Q8NGH3 330 aa15.32■□□□□ 0.04
KPNA1-210ENST00000494339 HIGD1CA8MV81 97 aa15.31■□□□□ 0.04
KPNA1-210ENST00000494339 ODF3L2Q3SX64 289 aa15.31■□□□□ 0.04
KPNA1-210ENST00000494339 C9orf66Q5T8R8 295 aa15.31■□□□□ 0.04
KPNA1-210ENST00000494339 RASL11AQ6T310 242 aa15.31■□□□□ 0.04
KPNA1-210ENST00000494339 NUP35Q8NFH5 326 aa15.31■□□□□ 0.04
KPNA1-210ENST00000494339 FRZBQ92765 325 aa15.31■□□□□ 0.04
KPNA1-210ENST00000494339 TRAPPC1Q9Y5R8 145 aa15.31■□□□□ 0.04
KPNA1-210ENST00000494339 HIST1H2BKO60814 126 aa15.31■□□□□ 0.04
KPNA1-210ENST00000494339 HIST1H2BJP06899 126 aa15.31■□□□□ 0.04
KPNA1-210ENST00000494339 HIST1H2BOP23527 126 aa15.31■□□□□ 0.04
KPNA1-210ENST00000494339 HIST1H2BBP33778 126 aa15.31■□□□□ 0.04
KPNA1-210ENST00000494339 HIST1H2BDP58876 126 aa15.31■□□□□ 0.04
KPNA1-210ENST00000494339 HIST1H2BCP62807 126 aa15.31■□□□□ 0.04
KPNA1-210ENST00000494339 HIST2H2BEQ16778 126 aa15.31■□□□□ 0.04
KPNA1-210ENST00000494339 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.31■□□□□ 0.04
KPNA1-210ENST00000494339 WDR73Q6P4I2 378 aa15.31■□□□□ 0.04
KPNA1-210ENST00000494339 HIST1H2BHQ93079 126 aa15.31■□□□□ 0.04
KPNA1-210ENST00000494339 HIST1H2BNQ99877 126 aa15.31■□□□□ 0.04
KPNA1-210ENST00000494339 HIST1H2BMQ99879 126 aa15.31■□□□□ 0.04
KPNA1-210ENST00000494339 GNB1LQ9BYB4 327 aa15.31■□□□□ 0.04
KPNA1-210ENST00000494339 TRRAPQ9Y4A5 3859 aa15.31■□□□□ 0.04
KPNA1-210ENST00000494339 SH2D1AO60880 128 aa15.29■□□□□ 0.04
KPNA1-210ENST00000494339 MT-ND6P03923 174 aa15.29■□□□□ 0.04
KPNA1-210ENST00000494339 TRGC1P0CF51 173 aa15.29■□□□□ 0.04
KPNA1-210ENST00000494339 INSL3P51460 131 aa15.29■□□□□ 0.04
KPNA1-210ENST00000494339 ATP5L2Q7Z4Y8 100 aa15.29■□□□□ 0.04
KPNA1-210ENST00000494339 FAM19A4Q96LR4 140 aa15.29■□□□□ 0.04
KPNA1-210ENST00000494339 XKRY2A2RUG3 117 aa15.29■□□□□ 0.04
KPNA1-210ENST00000494339 FOXA3P55318 350 aaPredicted RBP15.29■□□□□ 0.04
KPNA1-210ENST00000494339 FABP9Q0Z7S8 132 aa15.29■□□□□ 0.04
KPNA1-210ENST00000494339 PRR9Q5T870 116 aa15.29■□□□□ 0.04
KPNA1-210ENST00000494339 ZFAND2AQ8N6M9 145 aa15.29■□□□□ 0.04
KPNA1-210ENST00000494339 WFDC9Q8NEX5 89 aa15.29■□□□□ 0.04
KPNA1-210ENST00000494339 MDFIQ99750 246 aa15.29■□□□□ 0.04
KPNA1-210ENST00000494339 FABP5P3A8MUU1 101 aa15.28■□□□□ 0.04
KPNA1-210ENST00000494339 OR11H12B2RN74 326 aa15.28■□□□□ 0.04
KPNA1-210ENST00000494339 DUSP14O95147 198 aaKnown RBP15.28■□□□□ 0.04
KPNA1-210ENST00000494339 CD7P09564 240 aa15.28■□□□□ 0.04
KPNA1-210ENST00000494339 KIR3DS1Q14943 382 aa15.28■□□□□ 0.04
KPNA1-210ENST00000494339 GTSF1Q8WW33 167 aa15.28■□□□□ 0.04
KPNA1-210ENST00000494339 C5orf52A6NGY3 159 aa15.27■□□□□ 0.04
KPNA1-210ENST00000494339 SPINK4O60575 86 aa15.27■□□□□ 0.04
KPNA1-210ENST00000494339 HLA-DRB4P13762 266 aa15.27■□□□□ 0.04
KPNA1-210ENST00000494339 HLA-DRB4X5D2U9 266 aa15.27■□□□□ 0.04
KPNA1-210ENST00000494339 TMEM189A5PLL7 270 aa15.27■□□□□ 0.03
KPNA1-210ENST00000494339 GPX1P07203 203 aa15.27■□□□□ 0.03
KPNA1-210ENST00000494339 IGLL1P15814 213 aa15.27■□□□□ 0.03
KPNA1-210ENST00000494339 RPS20P60866 119 aaKnown RBP15.27■□□□□ 0.03
KPNA1-210ENST00000494339 BEAN1Q3B7T3 259 aa15.27■□□□□ 0.03
KPNA1-210ENST00000494339 Q6AWC8 147 aa15.27■□□□□ 0.03
KPNA1-210ENST00000494339 MRPL54Q6P161 138 aaKnown RBP15.27■□□□□ 0.03
KPNA1-210ENST00000494339 MCRIP2Q9BUT9 160 aaKnown RBP15.27■□□□□ 0.03
KPNA1-210ENST00000494339 TRBV7-9A0A0J9YWB2 115 aa15.26■□□□□ 0.03
KPNA1-210ENST00000494339 H3BMM0 161 aa15.26■□□□□ 0.03
KPNA1-210ENST00000494339 SNRPEP62304 92 aaKnown RBP15.26■□□□□ 0.03
KPNA1-210ENST00000494339 Q6ZQT7 251 aa15.26■□□□□ 0.03
KPNA1-210ENST00000494339 SNURFLB1AK76 121 aa15.25■□□□□ 0.03
KPNA1-210ENST00000494339 HLA-DQA1P01909 254 aa15.25■□□□□ 0.03
KPNA1-210ENST00000494339 CRISP2P16562 243 aa15.25■□□□□ 0.03
KPNA1-210ENST00000494339 M0R2Z0 102 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms