RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 SLC17A3O00476 420 aa1.88□□□□□ -2.11
CDC42EP3-205ENST00000494083 ZFAND5O76080 213 aa1.88□□□□□ -2.11
CDC42EP3-205ENST00000494083 NDUFA3O95167 84 aa1.88□□□□□ -2.11
CDC42EP3-205ENST00000494083 FAM106CPP0CH98 169 aa1.88□□□□□ -2.11
CDC42EP3-205ENST00000494083 LMO4P61968 165 aa1.88□□□□□ -2.11
CDC42EP3-205ENST00000494083 ADIRFQ15847 76 aa1.88□□□□□ -2.11
CDC42EP3-205ENST00000494083 FAM106AQ4KMX7 169 aa1.88□□□□□ -2.11
CDC42EP3-205ENST00000494083 LDLRAD2Q5SZI1 272 aa1.88□□□□□ -2.11
CDC42EP3-205ENST00000494083 OR51H1Q8NH63 302 aa1.88□□□□□ -2.11
CDC42EP3-205ENST00000494083 SPTSSAQ969W0 71 aa1.88□□□□□ -2.11
CDC42EP3-205ENST00000494083 RERGQ96A58 199 aaPredicted RBP1.88□□□□□ -2.11
CDC42EP3-205ENST00000494083 ADTRPQ96IZ2 230 aa1.88□□□□□ -2.11
CDC42EP3-205ENST00000494083 RPP21Q9H633 154 aaKnown RBP1.88□□□□□ -2.11
CDC42EP3-205ENST00000494083 FNDC4Q9H6D8 234 aaPredicted RBP1.88□□□□□ -2.11
CDC42EP3-205ENST00000494083 FAT2Q9NYQ8 4349 aa1.87□□□□□ -2.11
CDC42EP3-205ENST00000494083 IGLV5-45A0A087WSX0 123 aa1.87□□□□□ -2.11
CDC42EP3-205ENST00000494083 A0A1B0GV72 72 aa1.87□□□□□ -2.11
CDC42EP3-205ENST00000494083 IGIPA6NJ69 53 aa1.87□□□□□ -2.11
CDC42EP3-205ENST00000494083 GJE1A6NN92 205 aa1.87□□□□□ -2.11
CDC42EP3-205ENST00000494083 CEBPZOSA8MTT3 80 aa1.87□□□□□ -2.11
CDC42EP3-205ENST00000494083 E7EUB6 86 aa1.87□□□□□ -2.11
CDC42EP3-205ENST00000494083 TRAPPC6AO75865 159 aa1.87□□□□□ -2.11
CDC42EP3-205ENST00000494083 C8orf88P0DMB2 117 aa1.87□□□□□ -2.11
CDC42EP3-205ENST00000494083 MAGEA5P43359 124 aa1.87□□□□□ -2.11
CDC42EP3-205ENST00000494083 GPM6AP51674 278 aa1.87□□□□□ -2.11
CDC42EP3-205ENST00000494083 XGP55808 180 aa1.87□□□□□ -2.11
CDC42EP3-205ENST00000494083 KIAA1644Q3SXP7 199 aa1.87□□□□□ -2.11
CDC42EP3-205ENST00000494083 AMMECR1LQ6DCA0 310 aa1.87□□□□□ -2.11
CDC42EP3-205ENST00000494083 LCN12Q6JVE5 192 aa1.87□□□□□ -2.11
CDC42EP3-205ENST00000494083 MIR17HGQ75NE6 70 aa1.87□□□□□ -2.11
CDC42EP3-205ENST00000494083 STARD4Q96DR4 205 aa1.87□□□□□ -2.11
CDC42EP3-205ENST00000494083 RNASE7Q9H1E1 156 aaKnown RBP1.87□□□□□ -2.11
CDC42EP3-205ENST00000494083 C16orf95Q9H693 158 aa1.87□□□□□ -2.11
CDC42EP3-205ENST00000494083 TRAV3A0A0B4J244 114 aa1.87□□□□□ -2.11
CDC42EP3-205ENST00000494083 LOC107984156A0A0G2JMH3 177 aa1.87□□□□□ -2.11
CDC42EP3-205ENST00000494083 TRBV7-9A0A0J9YWB2 115 aa1.87□□□□□ -2.11
CDC42EP3-205ENST00000494083 LCE6AA0A183 80 aa1.87□□□□□ -2.11
CDC42EP3-205ENST00000494083 TEX50A0A1B0GTY4 177 aa1.87□□□□□ -2.11
CDC42EP3-205ENST00000494083 SPAARA0A1B0GVQ0 90 aa1.87□□□□□ -2.11
CDC42EP3-205ENST00000494083 A0A1W2PNU3 283 aaPredicted RBP1.87□□□□□ -2.11
CDC42EP3-205ENST00000494083 PGPA6NDG6 321 aa1.87□□□□□ -2.11
CDC42EP3-205ENST00000494083 PEX7O00628 323 aa1.87□□□□□ -2.11
CDC42EP3-205ENST00000494083 ZNF32P17041 273 aa1.87□□□□□ -2.11
CDC42EP3-205ENST00000494083 AZU1P20160 251 aa1.87□□□□□ -2.11
CDC42EP3-205ENST00000494083 GFERP55789 205 aa1.87□□□□□ -2.11
CDC42EP3-205ENST00000494083 HBBP68871 147 aa1.87□□□□□ -2.11
CDC42EP3-205ENST00000494083 PDE6HQ13956 83 aa1.87□□□□□ -2.11
CDC42EP3-205ENST00000494083 NNATQ16517 81 aa1.87□□□□□ -2.11
CDC42EP3-205ENST00000494083 ABCA11PQ4W5N1 156 aa1.87□□□□□ -2.11
CDC42EP3-205ENST00000494083 Q5XG85 94 aa1.87□□□□□ -2.11
CDC42EP3-205ENST00000494083 FAM53AQ6NSI3 398 aaPredicted RBP1.87□□□□□ -2.11
CDC42EP3-205ENST00000494083 Q6ZUT4 128 aa1.87□□□□□ -2.11
CDC42EP3-205ENST00000494083 ARL17AQ8IVW1 177 aa1.87□□□□□ -2.11
CDC42EP3-205ENST00000494083 ABCA7Q8IZY2 2146 aa1.87□□□□□ -2.11
CDC42EP3-205ENST00000494083 SLC25A45Q8N413 288 aa1.87□□□□□ -2.11
CDC42EP3-205ENST00000494083 LY6G5BQ8NDX9 201 aa1.87□□□□□ -2.11
CDC42EP3-205ENST00000494083 OR2AE1Q8NHA4 323 aa1.87□□□□□ -2.11
CDC42EP3-205ENST00000494083 CHAC1Q9BUX1 264 aa1.87□□□□□ -2.11
CDC42EP3-205ENST00000494083 SLC25A22Q9H936 323 aa1.87□□□□□ -2.11
CDC42EP3-205ENST00000494083 ZNF256Q9Y2P7 627 aaPredicted RBP1.87□□□□□ -2.11
CDC42EP3-205ENST00000494083 SMAD5-AS1Q9Y6J3 95 aa1.87□□□□□ -2.11
CDC42EP3-205ENST00000494083 PIEZO2Q9H5I5 2752 aa1.87□□□□□ -2.11
CDC42EP3-205ENST00000494083 TEX48A0A1B0GUV7 120 aa1.87□□□□□ -2.11
CDC42EP3-205ENST00000494083 OR4C46A6NHA9 309 aa1.87□□□□□ -2.11
CDC42EP3-205ENST00000494083 SNURFLB1AK76 121 aa1.87□□□□□ -2.11
CDC42EP3-205ENST00000494083 M0R381 172 aa1.87□□□□□ -2.11
CDC42EP3-205ENST00000494083 PATE4P0C8F1 98 aa1.87□□□□□ -2.11
CDC42EP3-205ENST00000494083 DEFA4P12838 97 aa1.87□□□□□ -2.11
CDC42EP3-205ENST00000494083 ZNF823P16415 610 aa1.87□□□□□ -2.11
CDC42EP3-205ENST00000494083 TNFAIP6P98066 277 aaPredicted RBP1.87□□□□□ -2.11
CDC42EP3-205ENST00000494083 ZNF90Q03938 601 aa1.87□□□□□ -2.11
CDC42EP3-205ENST00000494083 AESQ08117 197 aa1.87□□□□□ -2.11
CDC42EP3-205ENST00000494083 TIMM23BQ5SRD1 257 aa1.87□□□□□ -2.11
CDC42EP3-205ENST00000494083 KRTAP5-1Q6L8H4 278 aa1.87□□□□□ -2.11
CDC42EP3-205ENST00000494083 LCN15Q6UWW0 184 aa1.87□□□□□ -2.11
CDC42EP3-205ENST00000494083 ZFP2Q6ZN57 461 aa1.87□□□□□ -2.11
CDC42EP3-205ENST00000494083 ZNF709Q8N972 641 aa1.87□□□□□ -2.11
CDC42EP3-205ENST00000494083 SUMF1Q8NBK3 374 aa1.87□□□□□ -2.11
CDC42EP3-205ENST00000494083 NPBQ8NG41 125 aa1.87□□□□□ -2.11
CDC42EP3-205ENST00000494083 DCANP1Q8TF63 244 aa1.87□□□□□ -2.11
CDC42EP3-205ENST00000494083 TMEM263Q8WUH6 116 aaKnown RBP1.87□□□□□ -2.11
CDC42EP3-205ENST00000494083 TOMM6Q96B49 74 aa1.87□□□□□ -2.11
CDC42EP3-205ENST00000494083 KAAG1Q9UBP8 84 aa1.87□□□□□ -2.11
CDC42EP3-205ENST00000494083 ODF3BA8MYP8 253 aa1.86□□□□□ -2.11
CDC42EP3-205ENST00000494083 TNFSF12O43508 249 aa1.86□□□□□ -2.11
CDC42EP3-205ENST00000494083 ATP5LO75964 103 aa1.86□□□□□ -2.11
CDC42EP3-205ENST00000494083 HAND1O96004 215 aa1.86□□□□□ -2.11
CDC42EP3-205ENST00000494083 IGHV3-30P01768 117 aa1.86□□□□□ -2.11
CDC42EP3-205ENST00000494083 IGHG2P01859 326 aa1.86□□□□□ -2.11
CDC42EP3-205ENST00000494083 IGHV3-30-5P0DP03 117 aa1.86□□□□□ -2.11
CDC42EP3-205ENST00000494083 GNG4P50150 75 aa1.86□□□□□ -2.11
CDC42EP3-205ENST00000494083 HNRNPA3P51991 378 aaKnown RBP1.86□□□□□ -2.11
CDC42EP3-205ENST00000494083 FXYD2P54710 66 aa1.86□□□□□ -2.11
CDC42EP3-205ENST00000494083 FXYD4P59646 89 aa1.86□□□□□ -2.11
CDC42EP3-205ENST00000494083 SEC61BP60468 96 aaKnown RBP1.86□□□□□ -2.11
CDC42EP3-205ENST00000494083 PCBD1P61457 104 aa1.86□□□□□ -2.11
CDC42EP3-205ENST00000494083 RRN3P1Q2M238 152 aa1.86□□□□□ -2.11
CDC42EP3-205ENST00000494083 Q6ZN92 141 aa1.86□□□□□ -2.11
CDC42EP3-205ENST00000494083 LINC00336Q6ZUF6 198 aa1.86□□□□□ -2.11
CDC42EP3-205ENST00000494083 GPHB5Q86YW7 130 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms